RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 UTP4Q969X6 686 aaKnown RBP11.16□□□□□ -0.62
CX3CL1-201ENST00000006053 RAB20Q9NX57 234 aa11.16□□□□□ -0.62
CX3CL1-201ENST00000006053 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.16□□□□□ -0.62
CX3CL1-201ENST00000006053 NKX1-2Q9UD57 310 aaPredicted RBP11.16□□□□□ -0.62
CX3CL1-201ENST00000006053 PHTF1Q9UMS5 762 aa11.16□□□□□ -0.62
CX3CL1-201ENST00000006053 MRPL11Q9Y3B7 192 aaKnown RBP11.16□□□□□ -0.62
CX3CL1-201ENST00000006053 ADGRA3Q8IWK6 1321 aa11.16□□□□□ -0.62
CX3CL1-201ENST00000006053 GREB1LQ9C091 1923 aaPredicted RBP11.16□□□□□ -0.62
CX3CL1-201ENST00000006053 H0Y3Z8 333 aa11.16□□□□□ -0.62
CX3CL1-201ENST00000006053 UPP2O95045 317 aa11.16□□□□□ -0.62
CX3CL1-201ENST00000006053 ITGB5P18084 799 aa11.16□□□□□ -0.62
CX3CL1-201ENST00000006053 RAB27AP51159 221 aa11.16□□□□□ -0.62
CX3CL1-201ENST00000006053 P3H1Q32P28 736 aa11.16□□□□□ -0.62
CX3CL1-201ENST00000006053 TMEM63BQ5T3F8 832 aa11.16□□□□□ -0.62
CX3CL1-201ENST00000006053 CAPRIN2Q6IMN6 1127 aaKnown RBP11.16□□□□□ -0.62
CX3CL1-201ENST00000006053 PASD1Q8IV76 773 aa11.16□□□□□ -0.62
CX3CL1-201ENST00000006053 CCDC89Q8N998 374 aa11.16□□□□□ -0.62
CX3CL1-201ENST00000006053 FBXL13Q8NEE6 735 aa11.16□□□□□ -0.62
CX3CL1-201ENST00000006053 DDX1Q92499 740 aaKnown RBP11.16□□□□□ -0.62
CX3CL1-201ENST00000006053 GRAMD1AQ96CP6 724 aa11.16□□□□□ -0.62
CX3CL1-201ENST00000006053 LRRC37BQ96QE4 947 aa11.16□□□□□ -0.62
CX3CL1-201ENST00000006053 MXRA8Q9BRK3 442 aa11.16□□□□□ -0.62
CX3CL1-201ENST00000006053 IDI2Q9BXS1 227 aa11.16□□□□□ -0.62
CX3CL1-201ENST00000006053 KCNH7Q9NS40 1196 aa11.16□□□□□ -0.62
CX3CL1-201ENST00000006053 FBXO28Q9NVF7 368 aa11.16□□□□□ -0.62
CX3CL1-201ENST00000006053 MROH7Q68CQ1 1323 aa11.16□□□□□ -0.62
CX3CL1-201ENST00000006053 POLRMTO00411 1230 aaKnown RBP11.15□□□□□ -0.62
CX3CL1-201ENST00000006053 CCNB1P14635 433 aa11.15□□□□□ -0.62
CX3CL1-201ENST00000006053 ALCAMQ13740 583 aa11.15□□□□□ -0.62
CX3CL1-201ENST00000006053 LMBRD2Q68DH5 695 aaPredicted RBP11.15□□□□□ -0.62
CX3CL1-201ENST00000006053 MCOLN2Q8IZK6 566 aa11.15□□□□□ -0.62
CX3CL1-201ENST00000006053 DDX27Q96GQ7 796 aaKnown RBP11.15□□□□□ -0.62
CX3CL1-201ENST00000006053 PDGFDQ9GZP0 370 aaPredicted RBP11.15□□□□□ -0.62
CX3CL1-201ENST00000006053 VPS37BQ9H9H4 285 aa11.15□□□□□ -0.62
CX3CL1-201ENST00000006053 CHCHD3Q9NX63 227 aaKnown RBP11.15□□□□□ -0.62
CX3CL1-201ENST00000006053 LGALS13Q9UHV8 139 aa11.15□□□□□ -0.62
CX3CL1-201ENST00000006053 PI4K2BG5E9Z4 385 aa11.15□□□□□ -0.62
CX3CL1-201ENST00000006053 GRIN3BO60391 1043 aa11.15□□□□□ -0.62
CX3CL1-201ENST00000006053 MMP10P09238 476 aa11.15□□□□□ -0.62
CX3CL1-201ENST00000006053 ADSSP30520 456 aa11.15□□□□□ -0.62
CX3CL1-201ENST00000006053 POLGP54098 1239 aaPredicted RBP11.15□□□□□ -0.62
CX3CL1-201ENST00000006053 PLA2G4FQ68DD2 849 aa11.15□□□□□ -0.62
CX3CL1-201ENST00000006053 C11orf70Q9BRQ4 267 aa11.15□□□□□ -0.62
CX3CL1-201ENST00000006053 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.15□□□□□ -0.62
CX3CL1-201ENST00000006053 TMEM8AQ9HCN3 771 aa11.15□□□□□ -0.62
CX3CL1-201ENST00000006053 CHKBQ9Y259 395 aa11.15□□□□□ -0.62
CX3CL1-201ENST00000006053 AHDC1Q5TGY3 1603 aaPredicted RBP11.15□□□□□ -0.62
CX3CL1-201ENST00000006053 MAPK13O15264 365 aa11.15□□□□□ -0.62
CX3CL1-201ENST00000006053 ZSCAN5DPP0CG00 497 aa11.15□□□□□ -0.62
CX3CL1-201ENST00000006053 NSFP46459 744 aaKnown RBP11.15□□□□□ -0.62
CX3CL1-201ENST00000006053 RAD23BP54727 409 aa11.15□□□□□ -0.62
CX3CL1-201ENST00000006053 GTF2BQ00403 316 aa11.15□□□□□ -0.62
CX3CL1-201ENST00000006053 MTA1Q13330 715 aa11.15□□□□□ -0.62
CX3CL1-201ENST00000006053 XKR9Q5GH70 373 aa11.15□□□□□ -0.62
CX3CL1-201ENST00000006053 SV2AQ7L0J3 742 aa11.15□□□□□ -0.62
CX3CL1-201ENST00000006053 C12orf56Q8IXR9 622 aa11.15□□□□□ -0.62
CX3CL1-201ENST00000006053 OSBPL8Q9BZF1 889 aa11.15□□□□□ -0.62
CX3CL1-201ENST00000006053 KIAA1683Q9H0B3 1180 aa11.15□□□□□ -0.62
CX3CL1-201ENST00000006053 TRABDQ9H4I3 376 aa11.15□□□□□ -0.62
CX3CL1-201ENST00000006053 TCEAL9Q9UHQ7 104 aa11.15□□□□□ -0.62
CX3CL1-201ENST00000006053 MAFGO15525 162 aa11.14□□□□□ -0.63
CX3CL1-201ENST00000006053 TCEA3O75764 348 aa11.14□□□□□ -0.63
CX3CL1-201ENST00000006053 CBX6O95503 412 aa11.14□□□□□ -0.63
CX3CL1-201ENST00000006053 CA4P22748 312 aa11.14□□□□□ -0.63
CX3CL1-201ENST00000006053 CNGA1P29973 690 aa11.14□□□□□ -0.63
CX3CL1-201ENST00000006053 YWHABP31946 246 aaKnown RBP11.14□□□□□ -0.63
CX3CL1-201ENST00000006053 QARSP47897 775 aaKnown RBP11.14□□□□□ -0.63
CX3CL1-201ENST00000006053 TAS2R40P59535 323 aa11.14□□□□□ -0.63
CX3CL1-201ENST00000006053 SPARCL1Q14515 664 aa11.14□□□□□ -0.63
CX3CL1-201ENST00000006053 PKN2Q16513 984 aaKnown RBP11.14□□□□□ -0.63
CX3CL1-201ENST00000006053 HHATQ5VTY9 493 aa11.14□□□□□ -0.63
CX3CL1-201ENST00000006053 B3GNT9Q6UX72 402 aa11.14□□□□□ -0.63
CX3CL1-201ENST00000006053 LONP2Q86WA8 852 aa11.14□□□□□ -0.63
CX3CL1-201ENST00000006053 LDHDQ86WU2 507 aa11.14□□□□□ -0.63
CX3CL1-201ENST00000006053 IL31RAQ8NI17 732 aa11.14□□□□□ -0.63
CX3CL1-201ENST00000006053 LRRC8CQ8TDW0 803 aa11.14□□□□□ -0.63
CX3CL1-201ENST00000006053 POMGNT1Q8WZA1 660 aa11.14□□□□□ -0.63
CX3CL1-201ENST00000006053 CNKSR1Q969H4 720 aa11.14□□□□□ -0.63
CX3CL1-201ENST00000006053 RIT2Q99578 217 aa11.14□□□□□ -0.63
CX3CL1-201ENST00000006053 USH1CQ9Y6N9 552 aa11.14□□□□□ -0.63
CX3CL1-201ENST00000006053 WDR91A4D1P6 747 aa11.14□□□□□ -0.63
CX3CL1-201ENST00000006053 KRT10P13645 584 aa11.14□□□□□ -0.63
CX3CL1-201ENST00000006053 ETS1P14921 441 aa11.14□□□□□ -0.63
CX3CL1-201ENST00000006053 ATF7P17544 494 aaPredicted RBP11.14□□□□□ -0.63
CX3CL1-201ENST00000006053 ALDH3A1P30838 453 aa11.14□□□□□ -0.63
CX3CL1-201ENST00000006053 SKIV2L2P42285 1042 aaKnown RBP11.14□□□□□ -0.63
CX3CL1-201ENST00000006053 GPC3P51654 580 aa11.14□□□□□ -0.63
CX3CL1-201ENST00000006053 SOX10P56693 466 aa11.14□□□□□ -0.63
CX3CL1-201ENST00000006053 ACVR2BQ13705 512 aa11.14□□□□□ -0.63
CX3CL1-201ENST00000006053 FASTKD3Q14CZ7 662 aaKnown RBP11.14□□□□□ -0.63
CX3CL1-201ENST00000006053 PCNX4Q63HM2 1172 aa11.14□□□□□ -0.63
CX3CL1-201ENST00000006053 MIS18BP1Q6P0N0 1132 aa11.14□□□□□ -0.63
CX3CL1-201ENST00000006053 GLIS1Q8NBF1 620 aa11.14□□□□□ -0.63
CX3CL1-201ENST00000006053 BBOF1Q8ND07 529 aa11.14□□□□□ -0.63
CX3CL1-201ENST00000006053 MAML1Q92585 1016 aa11.14□□□□□ -0.63
CX3CL1-201ENST00000006053 CCDC97Q96F63 343 aaPredicted RBP11.14□□□□□ -0.63
CX3CL1-201ENST00000006053 NAF1Q96HR8 494 aaKnown RBP11.14□□□□□ -0.63
CX3CL1-201ENST00000006053 CFAP57Q96MR6 1250 aa11.14□□□□□ -0.63
CX3CL1-201ENST00000006053 TMEM165Q9HC07 324 aa11.14□□□□□ -0.63
CX3CL1-201ENST00000006053 ZMYND8Q9ULU4 1186 aaPredicted RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms