RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 ANKRD20A3Q5VUR7 823 aa14.9□□□□□ -0.02
USH1C-201ENST00000005226 CHURC1Q8WUH1 139 aa14.9□□□□□ -0.02
USH1C-201ENST00000005226 OSBPL8Q9BZF1 889 aa14.9□□□□□ -0.02
USH1C-201ENST00000005226 C10orf88Q9H8K7 445 aa14.9□□□□□ -0.02
USH1C-201ENST00000005226 PHTF1Q9UMS5 762 aa14.9□□□□□ -0.02
USH1C-201ENST00000005226 SCN9AQ15858 1988 aa14.89□□□□□ -0.03
USH1C-201ENST00000005226 WDR91A4D1P6 747 aa14.89□□□□□ -0.03
USH1C-201ENST00000005226 FAM47DPA6NHR8 397 aa14.89□□□□□ -0.03
USH1C-201ENST00000005226 GOLGA8SH3BPF8 625 aa14.89□□□□□ -0.03
USH1C-201ENST00000005226 GOLGA8MH3BSY2 632 aa14.89□□□□□ -0.03
USH1C-201ENST00000005226 CBX6O95503 412 aa14.89□□□□□ -0.03
USH1C-201ENST00000005226 RPA3P35244 121 aaPredicted RBP14.89□□□□□ -0.03
USH1C-201ENST00000005226 ATP11AP98196 1134 aa14.89□□□□□ -0.03
USH1C-201ENST00000005226 IL9RQ01113 521 aa14.89□□□□□ -0.03
USH1C-201ENST00000005226 KLF1Q13351 362 aaPredicted RBP14.89□□□□□ -0.03
USH1C-201ENST00000005226 PCNX4Q63HM2 1172 aa14.89□□□□□ -0.03
USH1C-201ENST00000005226 TRIM68Q6AZZ1 485 aa14.89□□□□□ -0.03
USH1C-201ENST00000005226 MAB21L3Q8N8X9 362 aa14.89□□□□□ -0.03
USH1C-201ENST00000005226 MICAL1Q8TDZ2 1067 aa14.89□□□□□ -0.03
USH1C-201ENST00000005226 GRK7Q8WTQ7 553 aa14.89□□□□□ -0.03
USH1C-201ENST00000005226 LGALS13Q9UHV8 139 aa14.89□□□□□ -0.03
USH1C-201ENST00000005226 UMODL1Q5DID0 1318 aa14.89□□□□□ -0.03
USH1C-201ENST00000005226 H0Y3Z8 333 aa14.89□□□□□ -0.03
USH1C-201ENST00000005226 FGFR1P11362 822 aa14.89□□□□□ -0.03
USH1C-201ENST00000005226 KRT15P19012 456 aa14.89□□□□□ -0.03
USH1C-201ENST00000005226 SP4Q02446 784 aa14.89□□□□□ -0.03
USH1C-201ENST00000005226 SLC1A5Q15758 541 aa14.89□□□□□ -0.03
USH1C-201ENST00000005226 RNF43Q68DV7 783 aa14.89□□□□□ -0.03
USH1C-201ENST00000005226 SPDL1Q96EA4 605 aa14.89□□□□□ -0.03
USH1C-201ENST00000005226 CCDC77Q9BR77 488 aa14.89□□□□□ -0.03
USH1C-201ENST00000005226 TRIM6Q9C030 488 aaPredicted RBP14.89□□□□□ -0.03
USH1C-201ENST00000005226 KIAA1683Q9H0B3 1180 aa14.89□□□□□ -0.03
USH1C-201ENST00000005226 KIAA1586Q9HCI6 787 aa14.89□□□□□ -0.03
USH1C-201ENST00000005226 DNPEPQ9ULA0 475 aa14.89□□□□□ -0.03
USH1C-201ENST00000005226 COQ4Q9Y3A0 265 aa14.89□□□□□ -0.03
USH1C-201ENST00000005226 ADGRA3Q8IWK6 1321 aa14.88□□□□□ -0.03
USH1C-201ENST00000005226 CCNE2O96020 404 aa14.88□□□□□ -0.03
USH1C-201ENST00000005226 ATP2A2P16615 1042 aaKnown RBP14.88□□□□□ -0.03
USH1C-201ENST00000005226 GM2AP17900 193 aa14.88□□□□□ -0.03
USH1C-201ENST00000005226 ALDH1B1P30837 517 aa14.88□□□□□ -0.03
USH1C-201ENST00000005226 NSFP46459 744 aaKnown RBP14.88□□□□□ -0.03
USH1C-201ENST00000005226 NCKAP1LP55160 1127 aa14.88□□□□□ -0.03
USH1C-201ENST00000005226 NOP14P78316 857 aaKnown RBP14.88□□□□□ -0.03
USH1C-201ENST00000005226 CYP24A1Q07973 514 aa14.88□□□□□ -0.03
USH1C-201ENST00000005226 MTMR1Q13613 665 aa14.88□□□□□ -0.03
USH1C-201ENST00000005226 CC2D2BQ6DHV5 1058 aa14.88□□□□□ -0.03
USH1C-201ENST00000005226 TAAR1Q96RJ0 339 aa14.88□□□□□ -0.03
USH1C-201ENST00000005226 TRABDQ9H4I3 376 aa14.88□□□□□ -0.03
USH1C-201ENST00000005226 VPS37BQ9H9H4 285 aa14.88□□□□□ -0.03
USH1C-201ENST00000005226 EURLQ9NYK6 297 aa14.88□□□□□ -0.03
USH1C-201ENST00000005226 SERPINA10Q9UK55 444 aa14.88□□□□□ -0.03
USH1C-201ENST00000005226 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.88□□□□□ -0.03
USH1C-201ENST00000005226 PROSCO94903 275 aa14.88□□□□□ -0.03
USH1C-201ENST00000005226 ASMTLO95671 621 aa14.88□□□□□ -0.03
USH1C-201ENST00000005226 MAPTP10636 758 aaKnown RBP14.88□□□□□ -0.03
USH1C-201ENST00000005226 CCNB1P14635 433 aa14.88□□□□□ -0.03
USH1C-201ENST00000005226 ATF7P17544 494 aaPredicted RBP14.88□□□□□ -0.03
USH1C-201ENST00000005226 ABL2P42684 1182 aa14.88□□□□□ -0.03
USH1C-201ENST00000005226 SLC8A3P57103 927 aa14.88□□□□□ -0.03
USH1C-201ENST00000005226 GAD2Q05329 585 aa14.88□□□□□ -0.03
USH1C-201ENST00000005226 ALCAMQ13740 583 aa14.88□□□□□ -0.03
USH1C-201ENST00000005226 TRABD2AQ86V40 505 aa14.88□□□□□ -0.03
USH1C-201ENST00000005226 ANKMY2Q8IV38 441 aa14.88□□□□□ -0.03
USH1C-201ENST00000005226 ANKRD35Q8N283 1001 aa14.88□□□□□ -0.03
USH1C-201ENST00000005226 KMT5AQ9NQR1 393 aa14.88□□□□□ -0.03
USH1C-201ENST00000005226 ZNF148Q9UQR1 794 aa14.88□□□□□ -0.03
USH1C-201ENST00000005226 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.88□□□□□ -0.03
USH1C-201ENST00000005226 LY75O60449 1722 aa14.88□□□□□ -0.03
USH1C-201ENST00000005226 TCEA3O75764 348 aa14.87□□□□□ -0.03
USH1C-201ENST00000005226 PECAM1P16284 738 aaPredicted RBP14.87□□□□□ -0.03
USH1C-201ENST00000005226 KLRC2P26717 231 aa14.87□□□□□ -0.03
USH1C-201ENST00000005226 STAT4Q14765 748 aa14.87□□□□□ -0.03
USH1C-201ENST00000005226 PPP1R21Q6ZMI0 780 aa14.87□□□□□ -0.03
USH1C-201ENST00000005226 TTC8Q8TAM2 541 aa14.87□□□□□ -0.03
USH1C-201ENST00000005226 SPIRE2Q8WWL2 714 aa14.87□□□□□ -0.03
USH1C-201ENST00000005226 ALG13Q9NP73 1137 aaKnown RBP14.87□□□□□ -0.03
USH1C-201ENST00000005226 NUMBLQ9Y6R0 609 aa14.87□□□□□ -0.03
USH1C-201ENST00000005226 ATRNL1Q5VV63 1379 aa14.87□□□□□ -0.03
USH1C-201ENST00000005226 LRRC37AA6NMS7 1700 aa14.87□□□□□ -0.03
USH1C-201ENST00000005226 CCDC189A1A4V9 331 aa14.87□□□□□ -0.03
USH1C-201ENST00000005226 T-ENOLP0DO92 83 aa14.87□□□□□ -0.03
USH1C-201ENST00000005226 EPHB2P29323 1055 aa14.87□□□□□ -0.03
USH1C-201ENST00000005226 CCNHP51946 323 aaPredicted RBP14.87□□□□□ -0.03
USH1C-201ENST00000005226 RPL7AP62424 266 aaKnown RBP14.87□□□□□ -0.03
USH1C-201ENST00000005226 TAF11Q15544 211 aa14.87□□□□□ -0.03
USH1C-201ENST00000005226 CCNG2Q16589 344 aa14.87□□□□□ -0.03
USH1C-201ENST00000005226 SYDE1Q6ZW31 735 aaPredicted RBP14.87□□□□□ -0.03
USH1C-201ENST00000005226 ANO5Q75V66 913 aa14.87□□□□□ -0.03
USH1C-201ENST00000005226 LONP2Q86WA8 852 aa14.87□□□□□ -0.03
USH1C-201ENST00000005226 CCDC89Q8N998 374 aa14.87□□□□□ -0.03
USH1C-201ENST00000005226 FBF1Q8TES7 1133 aa14.87□□□□□ -0.03
USH1C-201ENST00000005226 KLF6Q99612 283 aaPredicted RBP14.87□□□□□ -0.03
USH1C-201ENST00000005226 RAVER2Q9HCJ3 691 aaKnown RBP14.87□□□□□ -0.03
USH1C-201ENST00000005226 HNRNPDLO14979 420 aaKnown RBP14.86□□□□□ -0.03
USH1C-201ENST00000005226 ENTPD3O75355 529 aa14.86□□□□□ -0.03
USH1C-201ENST00000005226 CA4P22748 312 aa14.86□□□□□ -0.03
USH1C-201ENST00000005226 PEX19P40855 299 aa14.86□□□□□ -0.03
USH1C-201ENST00000005226 ACOT2P49753 483 aa14.86□□□□□ -0.03
USH1C-201ENST00000005226 POLGP54098 1239 aaPredicted RBP14.86□□□□□ -0.03
USH1C-201ENST00000005226 CAV1Q03135 178 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms