RNA–Protein interactions for RNA: ENSMUST00000211788.1

Ptpre-208, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

TSL 1 (best) BASIC

Gene Ptpre, Length 2,331 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-208ENSMUST00000211788 Stra6O70491 670 aa11.17□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Apba3O88888 571 aa11.17□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Klra8Q60682 266 aa11.17□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Gm14819Q62478 212 aa11.17□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Srd5a1Q68FF9 255 aa11.17□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Cpsf7Q8BTV2 471 aaKnown RBP11.17□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Epc2Q8C0I4 808 aa11.17□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Adgra1Q8C4G9 578 aa11.17□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Vmn1r199Q8R280 367 aa11.17□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Trpm8Q8R4D5 1104 aa11.17□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Acot11Q8VHQ9 594 aa11.17□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Nrbp2Q91V36 499 aa11.17□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Emc2Q9CRD2 297 aa11.17□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Llcfc1Q9D9P8 108 aa11.17□□□□□ -0.62
Ptpre-208ENSMUST00000211788 IydQ9DCX8 285 aa11.17□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Tcirg1Q9JHF5 834 aa11.17□□□□□ -0.62
Ptpre-208ENSMUST00000211788 IvdQ9JHI5 424 aa11.17□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Olig1Q9JKN5 260 aa11.17□□□□□ -0.62
Ptpre-208ENSMUST00000211788 JmyQ9QXM1 983 aa11.17□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Gbp2Q9Z0E6 589 aa11.17□□□□□ -0.62
Ptpre-208ENSMUST00000211788 MipepA6H611 711 aa11.16□□□□□ -0.62
Ptpre-208ENSMUST00000211788 DgkhD3YXJ0 1156 aa11.16□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Gm8994E9PV04 411 aaKnown RBP11.16□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Zfp457L7N1X4 647 aa11.16□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Vmn2r77L7N2B7 854 aa11.16□□□□□ -0.62
Ptpre-208ENSMUST00000211788 SpibO35906 267 aa11.16□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Gap43P06837 227 aa11.16□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Alkbh1P0CB42 389 aa11.16□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Ets2P15037 468 aa11.16□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Alox15P39654 663 aa11.16□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Fam8a1Q3URQ4 399 aa11.16□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Kctd19Q562E2 927 aa11.16□□□□□ -0.62
Ptpre-208ENSMUST00000211788 CcnjlQ5SRT8 387 aa11.16□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Sema5bQ60519 1093 aa11.16□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Zbtb17Q60821 794 aa11.16□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Parp6Q6P6P7 630 aa11.16□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Serpinb3dQ6UKZ0 387 aa11.16□□□□□ -0.62
Ptpre-208ENSMUST00000211788 PolrmtQ8BKF1 1207 aaKnown RBP11.16□□□□□ -0.62
Ptpre-208ENSMUST00000211788 PygbQ8CI94 843 aaKnown RBP11.16□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Lgi2Q8K4Z0 550 aa11.16□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Usp33Q8R5K2 909 aa11.16□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Pcdhgb4Q91XX6 912 aa11.16□□□□□ -0.62
Ptpre-208ENSMUST00000211788 BrdtQ91Y44 956 aa11.16□□□□□ -0.62
Ptpre-208ENSMUST00000211788 NwcQ9CQI4 244 aa11.16□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Srfbp1Q9CZ91 441 aaKnown RBP11.16□□□□□ -0.62
Ptpre-208ENSMUST00000211788 3830403N18RikQ9D6C3 208 aa11.16□□□□□ -0.62
Ptpre-208ENSMUST00000211788 MesdQ9ERE7 224 aa11.16□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Sv2aQ9JIS5 742 aa11.16□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Clcn2Q9R0A1 908 aa11.16□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Tll2Q9WVM6 1012 aa11.16□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Myh9Q8VDD5 1960 aaKnown RBP11.16□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Lamb2Q61292 1799 aa11.16□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Scn10aQ6QIY3 1958 aa11.16□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Lrriq4A6H6A4 596 aa11.15□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Gm6583E9Q8Z1 469 aa11.15□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Cyp2c68K7N6C2 491 aa11.15□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Clk1P22518 483 aa11.15□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Fmr1P35922 614 aaKnown RBP11.15□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Mfsd14aP70187 490 aa11.15□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Fam83hQ148V8 1209 aa11.15□□□□□ -0.62
Ptpre-208ENSMUST00000211788 SpoplQ2M2N2 392 aa11.15□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Thrap3Q569Z6 951 aaKnown RBP11.15□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Supt20hQ7TT00 530 aaKnown RBP11.15□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Ankzf1Q80UU1 748 aaKnown RBP11.15□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Rnaseh2bQ80ZV0 308 aa11.15□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Hsdl1Q8BTX9 330 aa11.15□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Actl9Q8CG27 415 aa11.15□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Epn2Q8CHU3 595 aa11.15□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Commd10Q8JZY2 202 aa11.15□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Xpo6Q924Z6 1125 aa11.15□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Rasgef1cQ9D300 466 aa11.15□□□□□ -0.62
Ptpre-208ENSMUST00000211788 PlgrktQ9D3P8 147 aa11.15□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Rpap3Q9D706 660 aa11.15□□□□□ -0.62
Ptpre-208ENSMUST00000211788 1700016D06RikQ9DAA5 166 aa11.15□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Tmod4Q9JLH8 345 aa11.15□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Prmt2Q9R144 448 aa11.15□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Cul1Q9WTX6 776 aa11.15□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Osbpl9A2A8Z1 736 aa11.15□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Speer2E9Q9U2 264 aa11.15□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Myl1P05977 188 aa11.15□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Xrcc5P27641 732 aa11.15□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Msh2P43247 935 aaKnown RBP11.15□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Alox12eP55249 662 aa11.15□□□□□ -0.62
Ptpre-208ENSMUST00000211788 FancbQ5XJY6 703 aa11.15□□□□□ -0.62
Ptpre-208ENSMUST00000211788 JrkQ60976 557 aa11.15□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Nr2e1Q64104 385 aa11.15□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Celf4Q7TSY6 486 aa11.15□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Nop53Q8BK35 484 aaKnown RBP11.15□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Ttc22Q8C159 568 aa11.15□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Fam228aQ8CDW1 299 aa11.15□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Stoml1Q8CI66 399 aa11.15□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Mrpl58Q8R035 206 aa11.15□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Ttc1Q91Z38 292 aa11.15□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Ankef1Q9D2J7 775 aa11.15□□□□□ -0.62
Ptpre-208ENSMUST00000211788 IscuQ9D7P6 168 aa11.15□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Nudt12Q9DCN1 462 aa11.15□□□□□ -0.62
Ptpre-208ENSMUST00000211788 H2-OaQ9QWV1 250 aa11.15□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Rad18Q9QXK2 509 aaKnown RBP11.15□□□□□ -0.62
Ptpre-208ENSMUST00000211788 PodxlQ9R0M4 503 aa11.15□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Taf1Q80UV9 1891 aa11.15□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 26.9 ms