RNA–Protein interactions for RNA: ENSMUST00000200043.4

Pdlim5-212, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pdlim5, Length 1,581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-212ENSMUST00000200043 Tbc1d22aQ8R5A6 516 aa16.71■□□□□ 0.27
Pdlim5-212ENSMUST00000200043 Olfr1499Q8VG65 314 aa16.71■□□□□ 0.27
Pdlim5-212ENSMUST00000200043 GarsQ9CZD3 729 aaKnown RBP16.71■□□□□ 0.27
Pdlim5-212ENSMUST00000200043 CenpsQ9D084 142 aa16.71■□□□□ 0.27
Pdlim5-212ENSMUST00000200043 Rilpl1Q9JJC6 406 aa16.71■□□□□ 0.27
Pdlim5-212ENSMUST00000200043 Rfx5Q9JL61 658 aa16.71■□□□□ 0.27
Pdlim5-212ENSMUST00000200043 TrioQ0KL02 3102 aa16.71■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Sf3b1Q99NB9 1304 aaKnown RBP16.7■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Man1b1A2AJ15 658 aa16.7■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Nfxl1E9Q8I7 918 aaKnown RBP16.7■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Olfr743L7N1Y2 311 aa16.7■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Hmgb1P63158 215 aaKnown RBP16.7■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Adcyap1r1P70205 496 aa16.7■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Plpp4Q0VBU9 271 aa16.7■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Kpna1Q60960 538 aa16.7■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Ift88Q61371 824 aa16.7■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Krt39Q6IFX4 482 aa16.7■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Gucy2gQ6TL19 1100 aa16.7■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Cep95Q8BVV7 827 aa16.7■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Kctd12bQ8C7J6 292 aa16.7■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 FgbQ8K0E8 481 aa16.7■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Sgms1Q8VCQ6 419 aa16.7■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Socs4Q91ZA6 436 aa16.7■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Them5Q9CQJ0 248 aa16.7■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Ddx25Q9QY15 484 aa16.7■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Vmn2r19G5E8G4 854 aa16.69■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Kcnh2O35219 1162 aa16.69■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 BhmtO35490 407 aaKnown RBP16.69■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Ca3P16015 260 aa16.69■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Slc10a3P21129 473 aa16.69■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Hoxd8P23463 289 aa16.69■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Cxcl12P40224 93 aa16.69■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Tatdn3Q3U1C6 294 aa16.69■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 UrgcpQ5NCI0 926 aa16.69■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Mvb12bQ6KAU4 317 aa16.69■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Spata20Q80YT5 790 aa16.69■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Rasal3Q8C2K5 1041 aa16.69■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Unc45bQ8CGY6 931 aaKnown RBP16.69■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Ap3m2Q8R2R9 418 aa16.69■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Uroc1Q8VC12 676 aa16.69■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Syt17Q920M7 470 aa16.69■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Trmt10bQ9D075 318 aa16.69■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 PirQ9D711 290 aa16.69■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Trpc3Q9QZC1 836 aa16.69■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Bdp1Q571C7 2467 aa16.69■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Cep290Q6A078 2472 aa16.69■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Scgb2b18A0A087WPA9 112 aa16.68■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 P01878 344 aa16.68■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Shmt1P50431 478 aa16.68■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Klra6Q60653 266 aa16.68■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Atp11bQ6DFW5 1175 aa16.68■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Rad9bQ6WBX7 403 aa16.68■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Ostm1Q8BGT0 338 aa16.68■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Abraxas1Q8BPZ8 407 aa16.68■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Ttc27Q8CD92 847 aa16.68■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Sox30Q8CGW4 782 aa16.68■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Tmem161aQ8VCA6 480 aa16.68■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Card14Q99KF0 999 aa16.68■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Akr1a1Q9JII6 325 aa16.68■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Grb14Q9JLM9 538 aa16.68■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 H2-OaQ9QWV1 250 aa16.68■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Myh10Q61879 1976 aaKnown RBP16.68■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Ugt1a8D3Z748 530 aa16.68■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Ugt1a10E9PXN7 530 aa16.68■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 XntrpcF8VQM8 1264 aa16.68■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Actn3O88990 900 aaKnown RBP16.68■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Slc12a1P55014 1095 aa16.68■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Olfml2bQ3V1G4 746 aa16.68■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 RetsatQ64FW2 609 aa16.68■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Olfr412Q7TRW7 312 aa16.68■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Rnf214Q8BFU3 668 aaKnown RBP16.68■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Nod1Q8BHB0 953 aa16.68■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Slc9a9Q8BZ00 644 aa16.68■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Slc9b1Q8C0X2 565 aa16.68■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Fbxo43Q8CDI2 640 aa16.68■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Fam151aQ8QZW3 608 aa16.68■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Slc13a3Q91Y63 600 aa16.68■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 VillQ91YD6 859 aa16.68■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Chd1lQ9CXF7 900 aa16.68■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Pramef12Q9D2F1 463 aa16.68■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Cfap45Q9D9U9 551 aa16.68■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Scyl1Q9EQC5 806 aaKnown RBP16.68■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Itga2bQ9QUM0 1033 aa16.68■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Abhd2Q9QXM0 425 aa16.68■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Umodl1Q5DID3 1319 aa16.67■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Vwa8Q8CC88 1905 aa16.67■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Gm4846B2RWH8 538 aa16.67■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Vmn2r111K7N674 857 aa16.67■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Fgd3O88842 733 aa16.67■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Slc3a2P10852 526 aaKnown RBP16.67■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Gnl1P36916 607 aa16.67■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Rhox12Q4TU81 186 aa16.67■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Pla2g4cQ64GA5 597 aa16.67■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Cfap97Q6ZPR1 541 aa16.67■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Map3k11Q80XI6 850 aa16.67■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Susd6Q8BGE4 302 aa16.67■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 AdigQ8R400 80 aa16.67■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Tom1l1Q923U0 474 aa16.67■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Utp3Q9JI13 469 aaKnown RBP16.67■□□□□ 0.26
Pdlim5-212ENSMUST00000200043 Odf2A3KGV1 830 aaKnown RBP16.66■□□□□ 0.26
Retrieved 100 of 22,080 RNA–protein pairs in 54.5 ms