RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Ebf2O08792 575 aa10.37□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Rhox5P52651 210 aa10.37□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 CpQ61147 1061 aa10.37□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Grid1Q61627 1009 aa10.37□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Tbc1d22bQ80VE5 505 aa10.37□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Usp37Q8C0R0 979 aa10.37□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Tmem145Q8C4U2 746 aa10.37□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Nsmce1Q9D720 266 aa10.37□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 1700016D06RikQ9DAA5 166 aa10.37□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Kif9Q9WV04 790 aa10.37□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Prdm12A2AJ77 365 aa10.37□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Pus7B7ZNL8 666 aaKnown RBP10.37□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Ttc7bE9Q6P5 843 aa10.37□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 PrlP06879 226 aa10.37□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Ets2P15037 468 aa10.37□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Gad2P48320 585 aa10.37□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Mfsd14aP70187 490 aa10.37□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Dzip1lQ499E4 774 aa10.37□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Nlrp4eQ66X19 978 aa10.37□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Klhdc10Q6PAR0 439 aa10.37□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Ccdc40Q8BI79 1192 aa10.37□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 EtnpplQ8BWU8 499 aa10.37□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 NemfQ8CCP0 1064 aaKnown RBP10.37□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Serpinb13Q8CDC0 389 aa10.37□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Ttc1Q91Z38 292 aa10.37□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Sapcd2Q9D818 391 aa10.37□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 FibpQ9JI19 357 aa10.37□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Pdk2Q9JK42 407 aa10.37□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Gm15262A0A140LIQ5 728 aa10.37□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Gm11549A0A286YD83 63 aa10.37□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Tldc2A2ACG1 198 aa10.37□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 JrklB2RRL2 523 aa10.37□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Ildr2B5TVM2 661 aa10.37□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 CalrP14211 416 aaKnown RBP10.37□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Cxcr2P35343 359 aa10.37□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Sar1aP36536 198 aa10.37□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Rbp3P49194 1234 aa10.37□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Vamp7P70280 220 aa10.37□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Pou6f1Q07916 301 aa10.37□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Ccdc160Q3UYG1 323 aa10.37□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 RilpQ5ND29 369 aa10.37□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Rbm12b1Q80YR9 836 aaKnown RBP10.37□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Wrap53Q8VC51 532 aa10.37□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Caskin2Q8VHK1 1201 aa10.37□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Cdk5rap3Q99LM2 503 aa10.37□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Tmem81Q9D5K1 259 aa10.37□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Tmx2Q9D710 295 aaKnown RBP10.37□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Cst12Q9DAN8 128 aa10.37□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Nphs1Q9QZS7 1256 aa10.37□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Fam47eD3YWC7 402 aa10.36□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Rag1P15919 1040 aa10.36□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 GckP52792 465 aa10.36□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 PklrP53657 574 aa10.36□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Tarbp2P97473 365 aa10.36□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Gbp1Q01514 589 aa10.36□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Man2a2Q8BRK9 1152 aa10.36□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Rtp1Q8C8C1 263 aa10.36□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Tnpo2Q99LG2 887 aaKnown RBP10.36□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Arhgef25Q9CWR0 618 aa10.36□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Gtf3c6Q9D8P7 227 aa10.36□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 PdiltQ9DAN1 588 aa10.36□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Olig1Q9JKN5 260 aa10.36□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Nudt5Q9JKX6 218 aa10.36□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Gon4lQ9DB00 2260 aa10.36□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Adamtsl1Q8BLI0 1745 aa10.36□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Unc5cO08747 931 aa10.36□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Snx3O70492 162 aa10.36□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Rfx2P48379 717 aa10.36□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Runx2Q08775 607 aa10.36□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Ppm1jQ149T7 507 aa10.36□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Tgfbrap1Q3UR70 860 aa10.36□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Ppp1r13lQ5I1X5 824 aa10.36□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Orc2Q60862 576 aaKnown RBP10.36□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Insm1Q63ZV0 521 aa10.36□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Nsun6Q7TS68 476 aa10.36□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Pwp2Q8BU03 919 aaKnown RBP10.36□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Apol7cQ8C6E1 369 aa10.36□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 ClasrpQ8CFC7 668 aa10.36□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 MgarpQ8VI64 283 aa10.36□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Pcdha10Q91Y20 946 aa10.36□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Dnajc3Q91YW3 504 aa10.36□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Ivns1abpQ920Q8 642 aa10.36□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Polr3fQ921X6 316 aa10.36□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Tmed5Q9CXE7 229 aa10.36□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Slc22a3Q9WTW5 551 aa10.36□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Col2a1P28481 1487 aa10.36□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Btaf1E9QAE3 1848 aa10.36□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 AgxtO35423 414 aa10.36□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Cd70O55237 195 aa10.36□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 PorP37040 678 aa10.36□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Rad54lP70270 747 aa10.36□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Vars2Q3U2A8 1060 aa10.36□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Capn13Q3UW68 665 aa10.36□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Ece1Q4PZA2 769 aa10.36□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Dclre1bQ8C7W7 541 aa10.36□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Smtnl2Q8CI12 456 aa10.36□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Kdm1bQ8CIG3 826 aa10.36□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Lrrc8cQ8R502 803 aa10.36□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Q9CYI0 393 aa10.36□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Pgm1Q9D0F9 562 aa10.36□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 31 ms