RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 LipeP54310 759 aa9.3□□□□□ -0.92
Trim39-201ENSMUST00000042717 PltpP55065 493 aa9.3□□□□□ -0.92
Trim39-201ENSMUST00000042717 AdkP55264 361 aa9.3□□□□□ -0.92
Trim39-201ENSMUST00000042717 Eef1dP57776 281 aaKnown RBP9.3□□□□□ -0.92
Trim39-201ENSMUST00000042717 Lrch2Q3UMG5 773 aa9.3□□□□□ -0.92
Trim39-201ENSMUST00000042717 Uimc1Q5U5Q9 727 aa9.3□□□□□ -0.92
Trim39-201ENSMUST00000042717 Ncoa7Q6DFV7 943 aa9.3□□□□□ -0.92
Trim39-201ENSMUST00000042717 Fmnl3Q6ZPF4 1028 aa9.3□□□□□ -0.92
Trim39-201ENSMUST00000042717 PolrmtQ8BKF1 1207 aaKnown RBP9.3□□□□□ -0.92
Trim39-201ENSMUST00000042717 Sar1bQ9CQC9 198 aa9.3□□□□□ -0.92
Trim39-201ENSMUST00000042717 Mis12Q9CY25 206 aa9.3□□□□□ -0.92
Trim39-201ENSMUST00000042717 VasnQ9CZT5 673 aa9.3□□□□□ -0.92
Trim39-201ENSMUST00000042717 Spock2Q9ER58 423 aa9.3□□□□□ -0.92
Trim39-201ENSMUST00000042717 Rab27aQ9ERI2 221 aa9.3□□□□□ -0.92
Trim39-201ENSMUST00000042717 ThegQ9JMB1 375 aa9.3□□□□□ -0.92
Trim39-201ENSMUST00000042717 Arih2Q9Z1K6 492 aa9.3□□□□□ -0.92
Trim39-201ENSMUST00000042717 1700031M16RikA0A087WSH0 82 aa9.29□□□□□ -0.92
Trim39-201ENSMUST00000042717 Olfr391-psA0A0U1RNJ4 312 aa9.29□□□□□ -0.92
Trim39-201ENSMUST00000042717 Ankrd16A2AS55 361 aa9.29□□□□□ -0.92
Trim39-201ENSMUST00000042717 Gm2030D3Z7C4 212 aa9.29□□□□□ -0.92
Trim39-201ENSMUST00000042717 Plekha5E9Q6H8 1269 aa9.29□□□□□ -0.92
Trim39-201ENSMUST00000042717 Tnfrsf18O35714 228 aa9.29□□□□□ -0.92
Trim39-201ENSMUST00000042717 Gnl1P36916 607 aa9.29□□□□□ -0.92
Trim39-201ENSMUST00000042717 Echdc2Q3TLP5 296 aa9.29□□□□□ -0.92
Trim39-201ENSMUST00000042717 Has1Q61647 583 aa9.29□□□□□ -0.92
Trim39-201ENSMUST00000042717 Ugt1a9Q62452 528 aa9.29□□□□□ -0.92
Trim39-201ENSMUST00000042717 Tcp10aQ80W76 438 aa9.29□□□□□ -0.92
Trim39-201ENSMUST00000042717 Ttc7aQ8BGB2 858 aa9.29□□□□□ -0.92
Trim39-201ENSMUST00000042717 Rps6ka5Q8C050 863 aa9.29□□□□□ -0.92
Trim39-201ENSMUST00000042717 Syt15Q8C6N3 418 aa9.29□□□□□ -0.92
Trim39-201ENSMUST00000042717 Olfr30Q8VGD8 315 aa9.29□□□□□ -0.92
Trim39-201ENSMUST00000042717 Ergic2Q9CR89 377 aa9.29□□□□□ -0.92
Trim39-201ENSMUST00000042717 PdclQ9DBX2 301 aa9.29□□□□□ -0.92
Trim39-201ENSMUST00000042717 IdeQ9JHR7 1019 aa9.29□□□□□ -0.92
Trim39-201ENSMUST00000042717 Tnfrsf10bQ9QZM4 381 aa9.29□□□□□ -0.92
Trim39-201ENSMUST00000042717 ZxdbA2CE44 873 aa9.29□□□□□ -0.92
Trim39-201ENSMUST00000042717 EloblA6PWE0 161 aa9.29□□□□□ -0.92
Trim39-201ENSMUST00000042717 Trim12cD3Z3L3 497 aa9.29□□□□□ -0.92
Trim39-201ENSMUST00000042717 Gm8994E9PV04 411 aaKnown RBP9.29□□□□□ -0.92
Trim39-201ENSMUST00000042717 JchainP01592 159 aa9.29□□□□□ -0.92
Trim39-201ENSMUST00000042717 TnfP06804 235 aa9.29□□□□□ -0.92
Trim39-201ENSMUST00000042717 Cdc25cP48967 447 aa9.29□□□□□ -0.92
Trim39-201ENSMUST00000042717 PkmP52480 531 aaKnown RBP9.29□□□□□ -0.92
Trim39-201ENSMUST00000042717 Ttf2Q5NC05 1138 aa9.29□□□□□ -0.92
Trim39-201ENSMUST00000042717 Crhr2Q60748 411 aa9.29□□□□□ -0.92
Trim39-201ENSMUST00000042717 Cct6bQ61390 531 aa9.29□□□□□ -0.92
Trim39-201ENSMUST00000042717 R3hdm2Q80TM6 1044 aaKnown RBP9.29□□□□□ -0.92
Trim39-201ENSMUST00000042717 Fbxo2Q80UW2 297 aa9.29□□□□□ -0.92
Trim39-201ENSMUST00000042717 Cfap100Q80VN0 613 aa9.29□□□□□ -0.92
Trim39-201ENSMUST00000042717 Pan2Q8BGF7 1200 aaKnown RBP9.29□□□□□ -0.92
Trim39-201ENSMUST00000042717 Cdc23Q8BGZ4 597 aa9.29□□□□□ -0.92
Trim39-201ENSMUST00000042717 Ppfibp1Q8C8U0 969 aaKnown RBP9.29□□□□□ -0.92
Trim39-201ENSMUST00000042717 Znf830Q8R1N0 363 aaKnown RBP9.29□□□□□ -0.92
Trim39-201ENSMUST00000042717 Smg8Q8VE18 991 aa9.29□□□□□ -0.92
Trim39-201ENSMUST00000042717 Rrp1bQ91YK2 724 aaKnown RBP9.29□□□□□ -0.92
Trim39-201ENSMUST00000042717 Tom1l1Q923U0 474 aa9.29□□□□□ -0.92
Trim39-201ENSMUST00000042717 Fuca2Q99KR8 461 aa9.29□□□□□ -0.92
Trim39-201ENSMUST00000042717 Cfap57Q9D180 1249 aa9.29□□□□□ -0.92
Trim39-201ENSMUST00000042717 ChmQ9QXG2 665 aa9.29□□□□□ -0.92
Trim39-201ENSMUST00000042717 Syngap1F6SEU4 1340 aa9.28□□□□□ -0.92
Trim39-201ENSMUST00000042717 Map7d2A2AG50 781 aa9.28□□□□□ -0.92
Trim39-201ENSMUST00000042717 Gm12394A2AKP6 982 aa9.28□□□□□ -0.92
Trim39-201ENSMUST00000042717 Hoxc8P09025 242 aa9.28□□□□□ -0.92
Trim39-201ENSMUST00000042717 NsfP46460 744 aa9.28□□□□□ -0.92
Trim39-201ENSMUST00000042717 Smyd1P97443 490 aa9.28□□□□□ -0.92
Trim39-201ENSMUST00000042717 Sin3bQ62141 1098 aa9.28□□□□□ -0.92
Trim39-201ENSMUST00000042717 ShbQ6PD21 503 aa9.28□□□□□ -0.92
Trim39-201ENSMUST00000042717 Cd300aQ6SJQ0 318 aa9.28□□□□□ -0.92
Trim39-201ENSMUST00000042717 Daam2Q80U19 1115 aa9.28□□□□□ -0.92
Trim39-201ENSMUST00000042717 Kcnv1Q8BZN2 503 aa9.28□□□□□ -0.92
Trim39-201ENSMUST00000042717 ClasrpQ8CFC7 668 aa9.28□□□□□ -0.92
Trim39-201ENSMUST00000042717 Adnp2Q8CHC8 1165 aaKnown RBP9.28□□□□□ -0.92
Trim39-201ENSMUST00000042717 CarfQ8VHI4 689 aa9.28□□□□□ -0.92
Trim39-201ENSMUST00000042717 Gtpbp4Q99ME9 634 aaKnown RBP9.28□□□□□ -0.92
Trim39-201ENSMUST00000042717 Tlr6Q9EPW9 795 aa9.28□□□□□ -0.92
Trim39-201ENSMUST00000042717 Pacsin2Q9WVE8 486 aaKnown RBP9.28□□□□□ -0.92
Trim39-201ENSMUST00000042717 Tmem131O70472 1877 aa9.28□□□□□ -0.92
Trim39-201ENSMUST00000042717 Kiaa0100Q5SYL3 2234 aa9.28□□□□□ -0.92
Trim39-201ENSMUST00000042717 Spata31d1aE9QA35 1336 aa9.28□□□□□ -0.92
Trim39-201ENSMUST00000042717 Zfp882E9Q4R4 555 aa9.28□□□□□ -0.92
Trim39-201ENSMUST00000042717 Gm4788E9Q8B5 879 aa9.28□□□□□ -0.92
Trim39-201ENSMUST00000042717 CcnoP0C242 352 aa9.28□□□□□ -0.92
Trim39-201ENSMUST00000042717 Ass1P16460 412 aa9.28□□□□□ -0.92
Trim39-201ENSMUST00000042717 Dpep1P31428 410 aa9.28□□□□□ -0.92
Trim39-201ENSMUST00000042717 Scp2P32020 547 aaKnown RBP9.28□□□□□ -0.92
Trim39-201ENSMUST00000042717 Cetn1P41209 172 aa9.28□□□□□ -0.92
Trim39-201ENSMUST00000042717 CybbQ61093 570 aa9.28□□□□□ -0.92
Trim39-201ENSMUST00000042717 KaznQ69ZS8 779 aa9.28□□□□□ -0.92
Trim39-201ENSMUST00000042717 Dusp11Q6NXK5 321 aaKnown RBP9.28□□□□□ -0.92
Trim39-201ENSMUST00000042717 Fhod1Q6P9Q4 1197 aa9.28□□□□□ -0.92
Trim39-201ENSMUST00000042717 Q6PD19 689 aa9.28□□□□□ -0.92
Trim39-201ENSMUST00000042717 Zfp397Q7TNK4 527 aa9.28□□□□□ -0.92
Trim39-201ENSMUST00000042717 Olfr389Q7TRX7 312 aa9.28□□□□□ -0.92
Trim39-201ENSMUST00000042717 GnsQ8BFR4 544 aa9.28□□□□□ -0.92
Trim39-201ENSMUST00000042717 Nop53Q8BK35 484 aaKnown RBP9.28□□□□□ -0.92
Trim39-201ENSMUST00000042717 SowahaQ8BLS7 548 aa9.28□□□□□ -0.92
Trim39-201ENSMUST00000042717 Mical2Q8BML1 960 aa9.28□□□□□ -0.92
Trim39-201ENSMUST00000042717 Fam78aQ8C552 283 aa9.28□□□□□ -0.92
Trim39-201ENSMUST00000042717 Tdrd7Q8K1H1 1086 aaKnown RBP9.28□□□□□ -0.92
Trim39-201ENSMUST00000042717 Il17cQ8K4C5 194 aa9.28□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 21.3 ms