RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Gxylt1Q3UHH8 404 aa12.53□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Afg1lQ3V384 480 aa12.53□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Dph1Q5NCQ5 438 aa12.53□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Kat6bQ8BRB7 1872 aa12.53□□□□□ -0.4
Pcif1-201ENSMUST00000041643 PtprvP70289 1705 aa12.53□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Adat2Q6P6J0 191 aa12.53□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Mindy1Q76LS9 468 aa12.53□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Frmd4aQ8BIE6 1020 aa12.53□□□□□ -0.4
Pcif1-201ENSMUST00000041643 NkrfQ8BY02 690 aaKnown RBP12.53□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Actl9Q8CG27 415 aa12.53□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Arhgap18Q8K0Q5 663 aa12.53□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Trpc7Q9WVC5 862 aa12.53□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Ccdc194A0A140LIT1 234 aa12.53□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Gm5795E9PZN8 263 aa12.53□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Serpinb9O08797 374 aa12.53□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Tgfbrap1Q3UR70 860 aa12.53□□□□□ -0.4
Pcif1-201ENSMUST00000041643 FAM120AQ6A0A9 1112 aaKnown RBP12.53□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Ppfia2Q8BSS9 1257 aa12.53□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Gkap1Q9JMB0 366 aa12.53□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Nme3Q9WV85 169 aa12.53□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Tlk2O55047 718 aa12.52□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Slc11a2P49282 568 aa12.52□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Nat8lQ3UGX3 299 aa12.52□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Ppme1Q8BVQ5 386 aa12.52□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Calr3Q9D9Q6 380 aa12.52□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Rabgap1lA6H6A9 815 aa12.52□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Cdh18E9Q9Q6 790 aa12.52□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Nkx1-1G3UXB3 402 aa12.52□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Pja1O55176 578 aa12.52□□□□□ -0.4
Pcif1-201ENSMUST00000041643 IapP03975 557 aa12.52□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Atxn10P28658 475 aa12.52□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Ccnd3P30282 292 aa12.52□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Ly9Q01965 654 aa12.52□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Ttc39dQ0VF76 604 aa12.52□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Stip1Q60864 543 aaKnown RBP12.52□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Q6GQV0 436 aa12.52□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Hsdl1Q8BTX9 330 aa12.52□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Ccdc186Q8C9S4 917 aa12.52□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Ranbp17Q99NF8 1088 aa12.52□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Golph3Q9CRA5 298 aa12.52□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Vmn2r55G3UWZ4 781 aa12.52□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Vmn2r53L7N473 806 aa12.52□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Skap2Q3UND0 358 aa12.52□□□□□ -0.41
Pcif1-201ENSMUST00000041643 GmipQ6PGG2 971 aa12.52□□□□□ -0.41
Pcif1-201ENSMUST00000041643 TdrkhQ80VL1 560 aa12.52□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Sik2Q8CFH6 931 aa12.52□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Cog3Q8CI04 820 aa12.52□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Myo5bP21271 1818 aa12.52□□□□□ -0.41
Pcif1-201ENSMUST00000041643 PolgP54099 1218 aa12.52□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Thumpd3P97770 505 aa12.52□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Sh2d1b2Q45HK4 132 aa12.52□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Vwa1Q8R2Z5 415 aa12.52□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Anapc4Q91W96 807 aa12.52□□□□□ -0.41
Pcif1-201ENSMUST00000041643 1700018B08RikQ9DA83 213 aa12.52□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Zscan4-ps1A0A1C7CYV3 506 aa12.52□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Tbkbp1A2A9T0 611 aa12.52□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Zscan4dA7KBS4 506 aa12.52□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Entpd7Q3TCT4 606 aa12.52□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Zscan4fQ3URS2 506 aa12.52□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Olfr8Q60892 310 aa12.52□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Zscan4cQ80VJ6 506 aa12.52□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Leg1Q8C6C9 337 aa12.52□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Fam111aQ9D2L9 613 aa12.52□□□□□ -0.41
Pcif1-201ENSMUST00000041643 DtnaQ9D2N4 746 aa12.52□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Ism1A2ATD1 454 aa12.51□□□□□ -0.41
Pcif1-201ENSMUST00000041643 EloblA6PWE0 161 aa12.51□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Gm8298J3QPI0 401 aa12.51□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Prl2c2P04095 224 aa12.51□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Pnpla5Q32LZ8 432 aa12.51□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Tfdp2Q64163 446 aa12.51□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Znf618Q80YY7 953 aaKnown RBP12.51□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Tasp1Q8R1G1 420 aa12.51□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Gdap1l1Q8VE33 370 aa12.51□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Homer2Q9QWW1 354 aa12.51□□□□□ -0.41
Pcif1-201ENSMUST00000041643 MtrA6H5Y3 1253 aa12.51□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Zfp850J3QPC5 689 aa12.51□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Tm4sf1Q64302 202 aa12.51□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Bpifb6Q8BU51 449 aa12.51□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Ttc16Q8C1F5 767 aa12.51□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Parp10Q8CIE4 960 aa12.51□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Slc35f6Q8VE96 372 aa12.51□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Olfr393Q8VGR6 312 aa12.51□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Plagl2Q925T4 496 aa12.51□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Tube1Q9D6T1 475 aa12.51□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Smim10l2aA0A0B4J1F8 78 aa12.51□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Trim5E9PV98 497 aa12.51□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Zfp358E9Q8M1 571 aa12.51□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Ap2a2P17427 938 aaKnown RBP12.51□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Arl14Q3SXC5 192 aa12.51□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Pnma2Q8BHK0 365 aa12.51□□□□□ -0.41
Pcif1-201ENSMUST00000041643 NemfQ8CCP0 1064 aaKnown RBP12.51□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Lamtor4Q8CF66 99 aa12.51□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Fbxw7Q8VBV4 629 aa12.51□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Me2Q99KE1 589 aa12.51□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Taf7lQ9D3R9 471 aa12.51□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Psma2P49722 234 aa12.51□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Tbx3P70324 741 aa12.51□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Stx2Q00262 289 aa12.51□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Znf746Q3U133 652 aa12.51□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Zbtb16Q3UQ17 673 aa12.51□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 21.7 ms