RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Apobec2Q9WV35 224 aa10.84□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 PapolbQ9WVP6 641 aa10.84□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Patl2A2ARM1 529 aa10.84□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 UncxO08934 530 aa10.84□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 TxnP10639 105 aaKnown RBP10.84□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Tal1P22091 329 aa10.84□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Trim43bP86448 445 aa10.84□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 G3bp2P97379 482 aaKnown RBP10.84□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 ThrspQ62264 150 aa10.84□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Trim47Q8C0E3 641 aa10.84□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Wdr60Q8C761 999 aa10.84□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 NelfcdQ922L6 591 aa10.84□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Spag6Q9JLI7 507 aa10.84□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Slc6a16A0A1L1SR47 742 aa10.83□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Lonrf1D3YY23 762 aa10.83□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Magea6O89010 325 aa10.83□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Ccnd2P30280 289 aa10.83□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Q3KNL4 93 aa10.83□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 GmncQ3URY2 333 aa10.83□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Dclk2Q6PGN3 756 aa10.83□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Magea3Q6T340 320 aa10.83□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Fndc3aQ8BX90 1198 aa10.83□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Efl1Q8C0D5 1127 aa10.83□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Pcdhgb4Q91XX6 912 aa10.83□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Twf1Q91YR1 350 aaKnown RBP10.83□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Krtap5-3Q9D226 196 aa10.83□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Coro7Q9D2V7 922 aa10.83□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Trpc4Q9QUQ5 974 aa10.83□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Slfn14V9GXG1 899 aa10.83□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Nptx2O70340 429 aa10.83□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 RpsaP14206 295 aaKnown RBP10.83□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Ap2a2P17427 938 aaKnown RBP10.83□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Bend4P86174 541 aa10.83□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 IqcmQ149I8 489 aa10.83□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 GmpsQ3THK7 693 aa10.83□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Lsm8Q6ZWM4 96 aaKnown RBP10.83□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 CenpuQ8C4M7 410 aa10.83□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Ipo11Q8K2V6 975 aa10.83□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Tgif2lx2Q8K5B9 231 aa10.83□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Pcdha10Q91Y20 946 aa10.83□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Rgs3Q9DC04 966 aa10.83□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Xpo7Q9EPK7 1087 aa10.83□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Tfr2Q9JKX3 798 aa10.83□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 N4bp2F8VQG7 1678 aaKnown RBP10.83□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Tcp11x2A2AEI7 503 aa10.83□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Unc13dB2RUP2 1085 aa10.83□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Anxa8O35640 327 aa10.83□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Magea5O89009 320 aa10.83□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Magea8O89012 320 aa10.83□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Hspa9P38647 679 aaKnown RBP10.83□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Crnkl1P63154 690 aaKnown RBP10.83□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Rgs9bpQ148R9 237 aa10.83□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Tas2r134Q7TQB0 298 aa10.83□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 OgtQ8CGY8 1046 aa10.83□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Anapc4Q91W96 807 aa10.83□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Pcdha11Q91Y19 950 aa10.83□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Prmt7Q922X9 692 aa10.83□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Znf687Q9D2D7 1237 aa10.83□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Uhmk1P97343 419 aa10.83□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Ndufaf2Q59J78 168 aa10.83□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Pacsin1Q61644 441 aa10.83□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Epha10Q8BYG9 1007 aa10.83□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Thg1lQ9CY52 298 aa10.83□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Ap2b1Q9DBG3 937 aa10.83□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Gyg1Q9R062 333 aa10.83□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Phf2Q9WTU0 1096 aa10.83□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Celf5D3Z4T1 395 aaKnown RBP10.82□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Gm10250G3X9L6 160 aaKnown RBP10.82□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Klc2O88448 599 aa10.82□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Mboat4P0C7A3 435 aa10.82□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Atp13a5Q3TYU2 1216 aa10.82□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Atp13a4Q5XF90 1193 aa10.82□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Zcchc2Q69ZB8 1166 aa10.82□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 DcakdQ8BHC4 231 aaKnown RBP10.82□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Ptrh1Q8BW00 204 aa10.82□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Trim32Q8CH72 655 aa10.82□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Akr1c14Q91WT7 323 aa10.82□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Msi2Q920Q6 346 aaKnown RBP10.82□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Nt5c3aQ9D020 331 aa10.82□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Atp5hQ9DCX2 161 aa10.82□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 LactbQ9EP89 551 aa10.82□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Smok2bQ9QYZ3 484 aa10.82□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Smok2aQ9QYZ6 504 aa10.82□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Gbp6A0A0G2JDV3 611 aa10.82□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Gm6370A0A0G2JGX9 315 aa10.82□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Mindy4b-psA0A1W2P7H6 457 aa10.82□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 4930523C07RikE9Q2T4 99 aa10.82□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Gm20721E9Q2U8 318 aa10.82□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Gm6309L7N481 315 aa10.82□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Gm3187M0QWW3 260 aa10.82□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Serpinb9O08797 374 aa10.82□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 EsrrgP62509 458 aa10.82□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 RalaP63321 206 aa10.82□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Tmem120bQ3TA38 339 aa10.82□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 9130409I23RikQ3TS87 320 aa10.82□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Tmem26Q3UP23 366 aa10.82□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Adad1Q5SUE7 619 aa10.82□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Jade1Q6ZPI0 834 aaKnown RBP10.82□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Pop1Q8K205 1045 aa10.82□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Tti1Q91V83 1085 aa10.82□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 53.3 ms