RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Ccdc80Q8R2G6 949 aa14.23□□□□□ -0.13
Nup88-201ENSMUST00000035283 Ces1fQ91WU0 561 aa14.23□□□□□ -0.13
Nup88-201ENSMUST00000035283 Zcrb1Q9CZ96 217 aaKnown RBP14.23□□□□□ -0.13
Nup88-201ENSMUST00000035283 Bcs1lQ9CZP5 418 aa14.23□□□□□ -0.13
Nup88-201ENSMUST00000035283 Mphosph6Q9D1Q1 161 aa14.23□□□□□ -0.13
Nup88-201ENSMUST00000035283 Slc12a4Q9JIS8 1085 aa14.23□□□□□ -0.13
Nup88-201ENSMUST00000035283 Vwa5b1A9Z1V5 1215 aa14.22□□□□□ -0.13
Nup88-201ENSMUST00000035283 Gad2P48320 585 aa14.22□□□□□ -0.13
Nup88-201ENSMUST00000035283 Atp11aP98197 1187 aa14.22□□□□□ -0.13
Nup88-201ENSMUST00000035283 Syce2Q505B8 171 aa14.22□□□□□ -0.13
Nup88-201ENSMUST00000035283 RilpQ5ND29 369 aa14.22□□□□□ -0.13
Nup88-201ENSMUST00000035283 Pabpn1lQ5XFR0 273 aa14.22□□□□□ -0.13
Nup88-201ENSMUST00000035283 Hbs1lQ69ZS7 682 aa14.22□□□□□ -0.13
Nup88-201ENSMUST00000035283 Cdc14aQ6GQT0 603 aa14.22□□□□□ -0.13
Nup88-201ENSMUST00000035283 Slc17a8Q8BFU8 601 aa14.22□□□□□ -0.13
Nup88-201ENSMUST00000035283 Vgll2Q8BGW8 322 aa14.22□□□□□ -0.13
Nup88-201ENSMUST00000035283 Pnpt1Q8K1R3 783 aaKnown RBP14.22□□□□□ -0.13
Nup88-201ENSMUST00000035283 Cd300ldQ8VCH2 221 aa14.22□□□□□ -0.13
Nup88-201ENSMUST00000035283 Rev1Q920Q2 1249 aa14.22□□□□□ -0.13
Nup88-201ENSMUST00000035283 HemgnQ9ERZ0 503 aa14.22□□□□□ -0.13
Nup88-201ENSMUST00000035283 Cib2Q9Z309 187 aa14.22□□□□□ -0.13
Nup88-201ENSMUST00000035283 Kmt2eQ3UG20 1868 aa14.22□□□□□ -0.13
Nup88-201ENSMUST00000035283 CaluO35887 315 aa14.22□□□□□ -0.13
Nup88-201ENSMUST00000035283 CidebO70303 219 aa14.22□□□□□ -0.13
Nup88-201ENSMUST00000035283 NsfP46460 744 aa14.22□□□□□ -0.13
Nup88-201ENSMUST00000035283 NfibP97863 570 aaKnown RBP14.22□□□□□ -0.13
Nup88-201ENSMUST00000035283 Fam8a1Q3URQ4 399 aa14.22□□□□□ -0.13
Nup88-201ENSMUST00000035283 Grb10Q60760 621 aa14.22□□□□□ -0.13
Nup88-201ENSMUST00000035283 Spata24Q6P926 205 aa14.22□□□□□ -0.13
Nup88-201ENSMUST00000035283 Rbm12b1Q80YR9 836 aaKnown RBP14.22□□□□□ -0.13
Nup88-201ENSMUST00000035283 Frmd4aQ8BIE6 1020 aa14.22□□□□□ -0.13
Nup88-201ENSMUST00000035283 Plekhh3Q8VCE9 796 aa14.22□□□□□ -0.13
Nup88-201ENSMUST00000035283 Ttc1Q91Z38 292 aa14.22□□□□□ -0.13
Nup88-201ENSMUST00000035283 Tmem68Q9D850 329 aa14.22□□□□□ -0.13
Nup88-201ENSMUST00000035283 Gtf3c6Q9D8P7 227 aa14.22□□□□□ -0.13
Nup88-201ENSMUST00000035283 Brwd3A2AHJ4 1799 aa14.22□□□□□ -0.13
Nup88-201ENSMUST00000035283 Gm21973F6WEZ7 68 aa14.21□□□□□ -0.13
Nup88-201ENSMUST00000035283 AgxtO35423 414 aa14.21□□□□□ -0.13
Nup88-201ENSMUST00000035283 Slc27a3O88561 667 aa14.21□□□□□ -0.13
Nup88-201ENSMUST00000035283 Rag1P15919 1040 aa14.21□□□□□ -0.13
Nup88-201ENSMUST00000035283 LdhbP16125 334 aaKnown RBP14.21□□□□□ -0.13
Nup88-201ENSMUST00000035283 Pde1bQ01065 535 aa14.21□□□□□ -0.13
Nup88-201ENSMUST00000035283 FaxcQ3UMF9 409 aa14.21□□□□□ -0.13
Nup88-201ENSMUST00000035283 Ccdc110Q3V125 848 aa14.21□□□□□ -0.13
Nup88-201ENSMUST00000035283 Gm4952Q5FW57 296 aa14.21□□□□□ -0.13
Nup88-201ENSMUST00000035283 Rap1gap2Q5SVL6 712 aaKnown RBP14.21□□□□□ -0.13
Nup88-201ENSMUST00000035283 Snx19Q6P4T1 997 aa14.21□□□□□ -0.13
Nup88-201ENSMUST00000035283 Znf445Q8R2V3 986 aa14.21□□□□□ -0.13
Nup88-201ENSMUST00000035283 MgarpQ8VI64 283 aa14.21□□□□□ -0.13
Nup88-201ENSMUST00000035283 Cdk5rap3Q99LM2 503 aa14.21□□□□□ -0.13
Nup88-201ENSMUST00000035283 Usp26Q99MX1 835 aa14.21□□□□□ -0.13
Nup88-201ENSMUST00000035283 Cuedc2Q9CXX9 284 aa14.21□□□□□ -0.13
Nup88-201ENSMUST00000035283 Rab11fip1Q9D620 645 aa14.21□□□□□ -0.13
Nup88-201ENSMUST00000035283 IydQ9DCX8 285 aa14.21□□□□□ -0.13
Nup88-201ENSMUST00000035283 Speer2E9Q9U2 264 aa14.21□□□□□ -0.13
Nup88-201ENSMUST00000035283 Tom1O88746 492 aa14.21□□□□□ -0.13
Nup88-201ENSMUST00000035283 Mt-CybP00158 381 aa14.21□□□□□ -0.13
Nup88-201ENSMUST00000035283 Rpl7aP12970 266 aaKnown RBP14.21□□□□□ -0.13
Nup88-201ENSMUST00000035283 M6prP24668 278 aa14.21□□□□□ -0.13
Nup88-201ENSMUST00000035283 Cdk16Q04735 496 aa14.21□□□□□ -0.13
Nup88-201ENSMUST00000035283 Zbtb14Q08376 449 aa14.21□□□□□ -0.13
Nup88-201ENSMUST00000035283 Cdca2Q14B71 982 aaKnown RBP14.21□□□□□ -0.13
Nup88-201ENSMUST00000035283 Tigd5Q499M4 642 aa14.21□□□□□ -0.13
Nup88-201ENSMUST00000035283 Sp4Q62445 782 aa14.21□□□□□ -0.13
Nup88-201ENSMUST00000035283 Ssxb5Q6XAS2 159 aa14.21□□□□□ -0.13
Nup88-201ENSMUST00000035283 Rhot1Q8BG51 631 aa14.21□□□□□ -0.13
Nup88-201ENSMUST00000035283 Leg1Q8C6C9 337 aa14.21□□□□□ -0.13
Nup88-201ENSMUST00000035283 Dppa3Q8QZY3 150 aa14.21□□□□□ -0.13
Nup88-201ENSMUST00000035283 Scrn2Q8VCA8 425 aa14.21□□□□□ -0.13
Nup88-201ENSMUST00000035283 Ubr3Q5U430 1889 aa14.2□□□□□ -0.14
Nup88-201ENSMUST00000035283 Itpripl1A2ASA8 547 aa14.2□□□□□ -0.14
Nup88-201ENSMUST00000035283 4930523C07RikE9Q2T4 99 aa14.2□□□□□ -0.14
Nup88-201ENSMUST00000035283 Cyp4f40G3UW81 524 aa14.2□□□□□ -0.14
Nup88-201ENSMUST00000035283 Chil3O35744 398 aa14.2□□□□□ -0.14
Nup88-201ENSMUST00000035283 Atp9aO70228 1047 aa14.2□□□□□ -0.14
Nup88-201ENSMUST00000035283 Itgb5O70309 798 aa14.2□□□□□ -0.14
Nup88-201ENSMUST00000035283 Nptx2O70340 429 aa14.2□□□□□ -0.14
Nup88-201ENSMUST00000035283 Serping1P97290 504 aa14.2□□□□□ -0.14
Nup88-201ENSMUST00000035283 Kcnc2Q14B80 642 aa14.2□□□□□ -0.14
Nup88-201ENSMUST00000035283 Nt5c2Q3V1L4 560 aa14.2□□□□□ -0.14
Nup88-201ENSMUST00000035283 MregQ6NVG5 214 aa14.2□□□□□ -0.14
Nup88-201ENSMUST00000035283 Prpf38bQ80SY5 542 aaKnown RBP14.2□□□□□ -0.14
Nup88-201ENSMUST00000035283 Sap130Q8BIH0 1057 aa14.2□□□□□ -0.14
Nup88-201ENSMUST00000035283 CenpuQ8C4M7 410 aa14.2□□□□□ -0.14
Nup88-201ENSMUST00000035283 Emilin2Q8K482 1074 aa14.2□□□□□ -0.14
Nup88-201ENSMUST00000035283 Rin1Q921Q7 763 aa14.2□□□□□ -0.14
Nup88-201ENSMUST00000035283 Dusp21Q9D9D8 189 aa14.2□□□□□ -0.14
Nup88-201ENSMUST00000035283 Kcnq4Q9JK97 696 aa14.2□□□□□ -0.14
Nup88-201ENSMUST00000035283 Slc22a3Q9WTW5 551 aa14.2□□□□□ -0.14
Nup88-201ENSMUST00000035283 Lamb2Q61292 1799 aa14.2□□□□□ -0.14
Nup88-201ENSMUST00000035283 IqccA2ADZ8 418 aa14.2□□□□□ -0.14
Nup88-201ENSMUST00000035283 TroapB7ZNG4 668 aa14.2□□□□□ -0.14
Nup88-201ENSMUST00000035283 Pus7B7ZNL8 666 aaKnown RBP14.2□□□□□ -0.14
Nup88-201ENSMUST00000035283 Capn6O35646 641 aa14.2□□□□□ -0.14
Nup88-201ENSMUST00000035283 HpdP49429 393 aa14.2□□□□□ -0.14
Nup88-201ENSMUST00000035283 SbdsP70122 250 aa14.2□□□□□ -0.14
Nup88-201ENSMUST00000035283 Mfsd14aP70187 490 aa14.2□□□□□ -0.14
Nup88-201ENSMUST00000035283 Luc7l3Q5SUF2 432 aaKnown RBP14.2□□□□□ -0.14
Nup88-201ENSMUST00000035283 HarsQ61035 509 aa14.2□□□□□ -0.14
Nup88-201ENSMUST00000035283 Ddx31Q6NZQ2 687 aaKnown RBP14.2□□□□□ -0.14
Retrieved 100 of 22,080 RNA–protein pairs in 19.9 ms