RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 Tom1l2Q5SRX1 507 aa19.51■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Rassf3Q99P51 232 aa19.51■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Kcnq4Q9JK97 696 aa19.51■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Spata31d1aE9QA35 1336 aa19.51■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Zgrf1Q0VGT4 1863 aa19.51■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Skint3A7TZF0 458 aa19.5■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Vamp7P70280 220 aa19.5■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 FaxcQ3UMF9 409 aa19.5■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Tcf12Q61286 706 aa19.5■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Grid1Q61627 1009 aa19.5■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Tph2Q8CGV2 488 aa19.5■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Kdm1bQ8CIG3 826 aa19.5■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Stard7Q8R1R3 373 aa19.5■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Tmed2Q9R0Q3 201 aa19.5■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Pgap3A2A559 320 aa19.5■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Gm5795E9PZN8 263 aa19.5■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Cap1P40124 474 aa19.5■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Atp13a5Q3TYU2 1216 aa19.5■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Dync1li2Q6PDL0 492 aaKnown RBP19.5■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Tcaf1Q8BNE1 924 aa19.5■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Sh3rf3Q8C120 878 aa19.5■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Tmem145Q8C4U2 746 aa19.5■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Fbxl13Q8CDU4 790 aa19.5■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 CactinQ9CS00 772 aaKnown RBP19.5■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Has3O08650 554 aa19.49■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Drp2Q05AA6 957 aa19.49■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Rassf6Q80UQ2 353 aa19.49■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 C2cd2lQ80X80 706 aa19.49■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Ago2Q8CJG0 860 aaKnown RBP19.49■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Tnpo2Q99LG2 887 aaKnown RBP19.49■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Plekhg4A0A1L1SU27 1217 aa19.49■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 CopeO89079 308 aa19.49■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Pde4aO89084 844 aa19.49■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Stmn4P63042 189 aa19.49■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Pou6f1Q07916 301 aa19.49■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Upf3bQ3ULL6 472 aa19.49■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Stambpl1Q76N33 436 aa19.49■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Vat1lQ80TB8 417 aa19.49■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Rbm12b1Q80YR9 836 aaKnown RBP19.49■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Kirrel3Q8BR86 778 aa19.49■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Fbxl5Q8C2S5 690 aa19.49■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Ivns1abpQ920Q8 642 aa19.49■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Psmd6Q99JI4 389 aa19.49■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Megf6Q80V70 1572 aa19.49■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Gm7995L7N2E4 160 aa19.48■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Tor1aip2Q8BYU6 502 aa19.48■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 BrdtQ91Y44 956 aa19.48■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 NptxrQ99J85 493 aa19.48■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Rbp7Q9EPC5 134 aa19.48■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Orc3Q9JK30 715 aaKnown RBP19.48■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Plcg1Q62077 1302 aa19.48■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Zfy1P10925 782 aa19.48■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Nrp1P97333 923 aa19.48■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Serpinb1cQ5SV42 375 aa19.48■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Nlrp4eQ66X19 978 aa19.48■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 2700097O09RikQ6PGK3 301 aa19.48■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Rhot1Q8BG51 631 aa19.48■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Slc4a7Q8BTY2 1034 aa19.48■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Inpp5fQ8CDA1 1132 aa19.48■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Ndfip2Q91ZP6 311 aa19.48■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Igf2bp3Q9CPN8 579 aaKnown RBP19.48■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Emc2Q9CRD2 297 aa19.48■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Slc27a2O35488 620 aa19.48■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Cdca2Q14B71 982 aaKnown RBP19.48■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Gm11437Q5QR91 290 aa19.48■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Birc2Q62210 612 aa19.48■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Tdpoz4Q6YCH2 370 aa19.48■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Azin2Q8BVM4 459 aa19.48■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Zfp449Q8CB76 518 aa19.48■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Lrch1P62046 709 aa19.47■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Usp37Q8C0R0 979 aa19.47■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Acot11Q8VHQ9 594 aa19.47■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 HgsQ99LI8 775 aa19.47■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Cst12Q9DAN8 128 aa19.47■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Trip11E9Q512 1976 aa19.47■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Gcnt4E9Q649 455 aa19.47■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Phka1P18826 1241 aa19.47■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Rfx2P48379 717 aa19.47■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 NfiaQ02780 532 aa19.47■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Gspt2Q149F3 632 aa19.47■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Kmt5aQ2YDW7 349 aa19.47■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Wasf2Q8BH43 497 aa19.47■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Clec4aQ9QZ15 238 aa19.47■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Birc5O70201 140 aa19.46■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Adamts10P58459 1104 aa19.46■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Taf1bP97358 586 aa19.46■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Krt77Q6IFZ6 572 aa19.46■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Trmt13Q8BYH3 481 aa19.46■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Apol7cQ8C6E1 369 aa19.46■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Hectd2Q8CDU6 774 aa19.46■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Trappc12Q8K2L8 797 aa19.46■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 McmbpQ8R3C0 642 aa19.46■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 DaglbQ91WC9 669 aa19.46■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Lrrc63A6H694 637 aa19.46■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Impa1O55023 277 aa19.46■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Trim43bP86448 445 aa19.46■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Rcn1Q05186 325 aa19.46■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Gm13103Q4VAD2 491 aa19.46■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Abi3bpQ59IW6 1179 aa19.46■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Acvrl1Q61288 502 aa19.46■□□□□ 0.71
Retrieved 100 of 22,080 RNA–protein pairs in 23.1 ms