RNA–Protein interactions for RNA: YPR013C

CMR3, Transcript of Putative zinc finger protein, yeast

Gene CMR3, Length 954 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CMR3	YPR013C	SEC22	P22214	214 aa		3.33	□□□□□ -1.88
CMR3	YPR013C	TRR1	P29509	319 aa	Known RBP	3.33	□□□□□ -1.88
CMR3	YPR013C	RNP1	P32385	249 aa		3.33	□□□□□ -1.88
CMR3	YPR013C	SSU72	P53538	206 aa	Predicted RBP	3.33	□□□□□ -1.88
CMR3	YPR013C	DID2	P69771	204 aa		3.33	□□□□□ -1.88
CMR3	YPR013C	ABF2	Q02486	183 aa		3.33	□□□□□ -1.88
CMR3	YPR013C	PIN3	Q06449	215 aa		3.33	□□□□□ -1.88
CMR3	YPR013C	YPL257W	Q08974	193 aa		3.33	□□□□□ -1.88
CMR3	YPR013C	USB1	Q12208	290 aa	Known RBP	3.33	□□□□□ -1.88
CMR3	YPR013C	IES3	Q12345	250 aa		3.33	□□□□□ -1.88
CMR3	YPR013C	YHR139C-A	O13536	103 aa		3.32	□□□□□ -1.88
CMR3	YPR013C	SEC4	P07560	215 aa	Known RBP	3.32	□□□□□ -1.88
CMR3	YPR013C	ERG24	P32462	438 aa	Known RBP	3.32	□□□□□ -1.88
CMR3	YPR013C	MRPS9	P38120	278 aa		3.32	□□□□□ -1.88
CMR3	YPR013C	FES1	P38260	290 aa		3.32	□□□□□ -1.88
CMR3	YPR013C	NRK1	P53915	240 aa		3.32	□□□□□ -1.88
CMR3	YPR013C	PET191	Q02772	108 aa		3.32	□□□□□ -1.88
CMR3	YPR013C	YMD8	Q03697	442 aa		3.32	□□□□□ -1.88
CMR3	YPR013C	NOC4	Q06512	552 aa	Predicted RBP	3.32	□□□□□ -1.88
CMR3	YPR013C	YLR030W	Q07967	263 aa		3.32	□□□□□ -1.88
CMR3	YPR013C	PUT1	P09368	476 aa		3.31	□□□□□ -1.88
CMR3	YPR013C	GCY1	P14065	312 aa	Known RBP RIP-Chip data	3.31	□□□□□ -1.88	not detected
CMR3	YPR013C	MSA2	P36157	363 aa		3.31	□□□□□ -1.88
CMR3	YPR013C	DOG2	P38773	246 aa		3.31	□□□□□ -1.88
CMR3	YPR013C	DOG1	P38774	246 aa		3.31	□□□□□ -1.88
CMR3	YPR013C	SEO1	P39709	593 aa		3.31	□□□□□ -1.88
CMR3	YPR013C	AIM25	P47140	327 aa		3.31	□□□□□ -1.88
CMR3	YPR013C	MDM34	P53083	459 aa		3.31	□□□□□ -1.88
CMR3	YPR013C	ALG9	P53868	555 aa	Known RBP	3.31	□□□□□ -1.88
CMR3	YPR013C	LSM7	P53905	115 aa	Known RBP	3.31	□□□□□ -1.88
CMR3	YPR013C	YNL140C	P53910	189 aa		3.31	□□□□□ -1.88
CMR3	YPR013C	YLR460C	P54007	376 aa		3.31	□□□□□ -1.88
CMR3	YPR013C	SCW10	Q04951	389 aa		3.31	□□□□□ -1.88
CMR3	YPR013C	GRX8	Q05926	109 aa		3.31	□□□□□ -1.88
CMR3	YPR013C	YOR020W-A	Q3E824	90 aa		3.31	□□□□□ -1.88
CMR3	YPR013C	RPL25	P04456	142 aa	Known RBP	3.3	□□□□□ -1.88
CMR3	YPR013C	MRS1	P07266	363 aa		3.3	□□□□□ -1.88
CMR3	YPR013C	TOM40	P23644	387 aa	Known RBP	3.3	□□□□□ -1.88
CMR3	YPR013C	LDB16	P25587	256 aa		3.3	□□□□□ -1.88
CMR3	YPR013C	TAH1	P25638	111 aa	Predicted RBP	3.3	□□□□□ -1.88
CMR3	YPR013C	TRR2	P38816	342 aa		3.3	□□□□□ -1.88
CMR3	YPR013C	MTW1	P39731	289 aa		3.3	□□□□□ -1.88
CMR3	YPR013C	YER121W	P40076	114 aa		3.3	□□□□□ -1.88
CMR3	YPR013C	PDS1	P40316	373 aa	Predicted RBP	3.3	□□□□□ -1.88
CMR3	YPR013C	GRH1	Q04410	372 aa	Known RBP	3.3	□□□□□ -1.88
CMR3	YPR013C	YLR036C	Q07986	203 aa		3.3	□□□□□ -1.88
CMR3	YPR013C	IGO2	Q9P305	131 aa		3.3	□□□□□ -1.88
CMR3	YPR013C	QCR2	P07257	368 aa		3.29	□□□□□ -1.88
CMR3	YPR013C	DSF1	P0CX08	502 aa		3.29	□□□□□ -1.88
CMR3	YPR013C	YNR073C	P0CX09	502 aa		3.29	□□□□□ -1.88
CMR3	YPR013C	TCA17	P32613	152 aa		3.29	□□□□□ -1.88
CMR3	YPR013C	RCN1	P36054	211 aa		3.29	□□□□□ -1.88
CMR3	YPR013C	COS8	P38723	381 aa		3.29	□□□□□ -1.88
CMR3	YPR013C	RPF1	P38805	295 aa	Known RBP	3.29	□□□□□ -1.88
CMR3	YPR013C	RMD6	P39975	231 aa		3.29	□□□□□ -1.88
CMR3	YPR013C	YFR045W	P43617	309 aa		3.29	□□□□□ -1.88
CMR3	YPR013C	MIG2	P53035	382 aa		3.29	□□□□□ -1.88
CMR3	YPR013C	ARO80	Q04052	950 aa		3.29	□□□□□ -1.88
CMR3	YPR013C	NIP7	Q08962	181 aa	Known RBP	3.29	□□□□□ -1.88
CMR3	YPR013C	GEP5	Q12393	293 aa		3.29	□□□□□ -1.88
CMR3	YPR013C	FCY2	P17064	533 aa		3.28	□□□□□ -1.88
CMR3	YPR013C	TRX3	P25372	127 aa		3.28	□□□□□ -1.88
CMR3	YPR013C	AME1	P38313	324 aa		3.28	□□□□□ -1.88
CMR3	YPR013C	YOL024W	Q08172	172 aa		3.28	□□□□□ -1.88
CMR3	YPR013C	BBP1	Q12365	385 aa		3.28	□□□□□ -1.88
CMR3	YPR013C	NOT5	Q12514	560 aa	Predicted RBP	3.28	□□□□□ -1.88
CMR3	YPR013C	YHR214C-E	Q8TGK0	99 aa		3.28	□□□□□ -1.88
CMR3	YPR013C	CDC7	P06243	507 aa		3.27	□□□□□ -1.89
CMR3	YPR013C	MGT1	P26188	188 aa		3.27	□□□□□ -1.89
CMR3	YPR013C	PTM1	P32857	523 aa		3.27	□□□□□ -1.89
CMR3	YPR013C	UBC6	P33296	250 aa	Predicted RBP	3.27	□□□□□ -1.89
CMR3	YPR013C	YBR063C	P38083	404 aa		3.27	□□□□□ -1.89
CMR3	YPR013C	FIS1	P40515	155 aa		3.27	□□□□□ -1.89
CMR3	YPR013C	YKE4	P40544	346 aa		3.27	□□□□□ -1.89
CMR3	YPR013C	ECO1	P43605	281 aa		3.27	□□□□□ -1.89
CMR3	YPR013C	RPA43	P46669	326 aa		3.27	□□□□□ -1.89
CMR3	YPR013C	JAC1	P53193	184 aa		3.27	□□□□□ -1.89
CMR3	YPR013C	HST4	P53688	370 aa		3.27	□□□□□ -1.89
CMR3	YPR013C	YOL160W	Q08321	113 aa		3.27	□□□□□ -1.89
CMR3	YPR013C	YDL085C-A	Q3E7B7	68 aa	Known RBP	3.27	□□□□□ -1.89
CMR3	YPR013C	TDA8	Q6B2U8	126 aa		3.27	□□□□□ -1.89
CMR3	YPR013C	CCH1	P50077	2039 aa		3.26	□□□□□ -1.89
CMR3	YPR013C	SGA1	P08019	549 aa		3.26	□□□□□ -1.89
CMR3	YPR013C	YAR068W	P39564	161 aa		3.26	□□□□□ -1.89
CMR3	YPR013C	IRC22	P40006	225 aa		3.26	□□□□□ -1.89
CMR3	YPR013C	MRPL49	P40858	161 aa	Predicted RBP	3.26	□□□□□ -1.89
CMR3	YPR013C	YGR050C	P53231	118 aa		3.26	□□□□□ -1.89
CMR3	YPR013C	YNL247W	P53852	767 aa	Known RBP	3.26	□□□□□ -1.89
CMR3	YPR013C	LPP1	Q04396	274 aa		3.26	□□□□□ -1.89
CMR3	YPR013C	GGA1	Q06336	557 aa		3.26	□□□□□ -1.89
CMR3	YPR013C	SIR2	P06700	562 aa		3.25	□□□□□ -1.89
CMR3	YPR013C	ADH3	P07246	375 aa	Known RBP	3.25	□□□□□ -1.89
CMR3	YPR013C	YPR170W-B	P0C5R9	85 aa		3.25	□□□□□ -1.89
CMR3	YPR013C	MAG1	P22134	296 aa	Known RBP	3.25	□□□□□ -1.89
CMR3	YPR013C	YGP1	P38616	354 aa	Known RBP	3.25	□□□□□ -1.89
CMR3	YPR013C	AST2	P39945	430 aa	Known RBP	3.25	□□□□□ -1.89
CMR3	YPR013C	HMF1	P40037	129 aa	Known RBP	3.25	□□□□□ -1.89
CMR3	YPR013C	FLC3	P53121	802 aa		3.25	□□□□□ -1.89
CMR3	YPR013C	YNL184C	P53876	108 aa		3.25	□□□□□ -1.89
CMR3	YPR013C	COG5	P53951	403 aa		3.25	□□□□□ -1.89

Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms