RNA–Protein interactions for RNA: YNR031C

SSK2, Transcript of MAP kinase kinase kinase of HOG1 mitogen-activated signaling pathway, yeastyeast

Gene SSK2, Length 4,740 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSK2YNR031C GOT1Q03554 138 aa1.34□□□□□ -2.2
SSK2YNR031C TRM12Q04235 462 aa1.34□□□□□ -2.2
SSK2YNR031C SNO4Q04902 237 aa1.34□□□□□ -2.2
SSK2YNR031C TMA10Q06177 86 aa1.34□□□□□ -2.2
SSK2YNR031C YOL073CQ08232 322 aa1.34□□□□□ -2.2
SSK2YNR031C HSP33Q08914 237 aaKnown RBP1.34□□□□□ -2.2
SSK2YNR031C HSP32Q08992 237 aa1.34□□□□□ -2.2
SSK2YNR031C YOR029WQ12243 111 aa1.34□□□□□ -2.2
SSK2YNR031C PEX11Q12462 236 aa1.34□□□□□ -2.2
SSK2YNR031C RPL6BP05739 176 aaKnown RBP1.33□□□□□ -2.2
SSK2YNR031C ARF1P11076 181 aaKnown RBP1.33□□□□□ -2.2
SSK2YNR031C CPR2P23285 205 aa1.33□□□□□ -2.2
SSK2YNR031C PPH21P23594 369 aa1.33□□□□□ -2.2
SSK2YNR031C SUA7P29055 345 aaPredicted RBP1.33□□□□□ -2.2
SSK2YNR031C GPX1P36014 167 aa1.33□□□□□ -2.2
SSK2YNR031C RTC2P38279 296 aa1.33□□□□□ -2.2
SSK2YNR031C ICS2P38284 255 aa1.33□□□□□ -2.2
SSK2YNR031C OXA1P39952 402 aa1.33□□□□□ -2.2
SSK2YNR031C YIL108WP40483 696 aaKnown RBP1.33□□□□□ -2.2
SSK2YNR031C SMK1P41808 388 aa1.33□□□□□ -2.2
SSK2YNR031C NSE4P43124 402 aa1.33□□□□□ -2.2
SSK2YNR031C MSO1P53604 210 aaKnown RBP1.33□□□□□ -2.2
SSK2YNR031C HCH1P53834 153 aa1.33□□□□□ -2.2
SSK2YNR031C SNO1Q03144 224 aa1.33□□□□□ -2.2
SSK2YNR031C PFA5Q03289 374 aa1.33□□□□□ -2.2
SSK2YNR031C TRS31Q03337 283 aa1.33□□□□□ -2.2
SSK2YNR031C ACL4Q03771 387 aa1.33□□□□□ -2.2
SSK2YNR031C SMP3Q04174 516 aa1.33□□□□□ -2.2
SSK2YNR031C YDR124WQ04608 324 aa1.33□□□□□ -2.2
SSK2YNR031C ASR1Q06834 288 aa1.33□□□□□ -2.2
SSK2YNR031C MEU1Q07938 337 aaKnown RBP RIP-Chip data1.33□□□□□ -2.2not detected
SSK2YNR031C YOL029CQ08187 201 aa1.33□□□□□ -2.2
SSK2YNR031C RDL2Q08742 149 aaKnown RBP1.33□□□□□ -2.2
SSK2YNR031C NDD1Q08887 554 aa1.33□□□□□ -2.2
SSK2YNR031C YPL257WQ08974 193 aa1.33□□□□□ -2.2
SSK2YNR031C FCF2Q12035 217 aaPredicted RBP1.33□□□□□ -2.2
SSK2YNR031C YOL107WQ12239 342 aa1.33□□□□□ -2.2
SSK2YNR031C POM34Q12445 299 aa1.33□□□□□ -2.2
SSK2YNR031C PCC1Q3E833 88 aa1.33□□□□□ -2.2
SSK2YNR031C CAR1P00812 333 aaKnown RBP1.33□□□□□ -2.2
SSK2YNR031C ADH3P07246 375 aaKnown RBP1.33□□□□□ -2.2
SSK2YNR031C PEP4P07267 405 aaKnown RBP1.33□□□□□ -2.2
SSK2YNR031C SAG1P20840 650 aa1.33□□□□□ -2.2
SSK2YNR031C GAS1P22146 559 aaKnown RBP1.33□□□□□ -2.2
SSK2YNR031C LSB5P25369 354 aa1.33□□□□□ -2.2
SSK2YNR031C ATP11P32453 318 aa1.33□□□□□ -2.2
SSK2YNR031C PTM1P32857 523 aa1.33□□□□□ -2.2
SSK2YNR031C ECT1P33412 323 aa1.33□□□□□ -2.2
SSK2YNR031C ECM15P35195 104 aa1.33□□□□□ -2.2
SSK2YNR031C COS9P36034 407 aa1.33□□□□□ -2.2
SSK2YNR031C YBR013CP38215 129 aa1.33□□□□□ -2.2
SSK2YNR031C IST2P38250 946 aa1.33□□□□□ -2.2
SSK2YNR031C ARN2P38724 620 aa1.33□□□□□ -2.2
SSK2YNR031C KRE29P40026 464 aa1.33□□□□□ -2.2
SSK2YNR031C MOG1P47123 218 aa1.33□□□□□ -2.2
SSK2YNR031C CCC1P47818 322 aa1.33□□□□□ -2.2
SSK2YNR031C PHB2P50085 310 aa1.33□□□□□ -2.2
SSK2YNR031C ERG25P53045 309 aa1.33□□□□□ -2.2
SSK2YNR031C NIF3P53081 288 aa1.33□□□□□ -2.2
SSK2YNR031C FHN1P53279 174 aa1.33□□□□□ -2.2
SSK2YNR031C TPS1Q00764 495 aaKnown RBP1.33□□□□□ -2.2
SSK2YNR031C LPP1Q04396 274 aa1.33□□□□□ -2.2
SSK2YNR031C POS5Q06892 414 aa1.33□□□□□ -2.2
SSK2YNR031C YLR046CQ12253 270 aa1.33□□□□□ -2.2
SSK2YNR031C ISA2Q12425 185 aa1.33□□□□□ -2.2
SSK2YNR031C PSF1Q12488 208 aa1.33□□□□□ -2.2
SSK2YNR031C YPT6Q99260 215 aa1.33□□□□□ -2.2
SSK2YNR031C RPL9AP05738 191 aaKnown RBP1.33□□□□□ -2.2
SSK2YNR031C RPS23AP0CX29 145 aaKnown RBP1.33□□□□□ -2.2
SSK2YNR031C RPS23BP0CX30 145 aa1.33□□□□□ -2.2
SSK2YNR031C NOP1P15646 327 aaKnown RBP1.33□□□□□ -2.2
SSK2YNR031C ATP10P18496 279 aa1.33□□□□□ -2.2
SSK2YNR031C MAG1P22134 296 aaKnown RBP1.33□□□□□ -2.2
SSK2YNR031C AST1P35183 429 aa1.33□□□□□ -2.2
SSK2YNR031C MRPL39P36533 70 aa1.33□□□□□ -2.2
SSK2YNR031C ECM8P38246 354 aa1.33□□□□□ -2.2
SSK2YNR031C SEC72P39742 193 aaKnown RBP1.33□□□□□ -2.2
SSK2YNR031C YER135CP40082 130 aa1.33□□□□□ -2.2
SSK2YNR031C RPL13BP40212 199 aaKnown RBP1.33□□□□□ -2.2
SSK2YNR031C PGD1P40356 397 aa1.33□□□□□ -2.2
SSK2YNR031C YFR020WP43600 232 aa1.33□□□□□ -2.2
SSK2YNR031C YJR149WP47177 404 aa1.33□□□□□ -2.2
SSK2YNR031C SOL1P50278 321 aa1.33□□□□□ -2.2
SSK2YNR031C RPL9BP51401 191 aaKnown RBP1.33□□□□□ -2.2
SSK2YNR031C ARO8P53090 500 aaKnown RBP1.33□□□□□ -2.2
SSK2YNR031C HXT11P54862 567 aa1.33□□□□□ -2.2
SSK2YNR031C YCL001W-AP87012 153 aa1.33□□□□□ -2.2
SSK2YNR031C GAS3Q03655 524 aa1.33□□□□□ -2.2
SSK2YNR031C TRS23Q03784 219 aa1.33□□□□□ -2.2
SSK2YNR031C MUS81Q04149 632 aaPredicted RBP1.33□□□□□ -2.2
SSK2YNR031C YMR320WQ04897 101 aa1.33□□□□□ -2.2
SSK2YNR031C MRX8Q05473 314 aa1.33□□□□□ -2.2
SSK2YNR031C YHC1Q05900 231 aaKnown RBP1.33□□□□□ -2.2
SSK2YNR031C CSI2Q08054 341 aa1.33□□□□□ -2.2
SSK2YNR031C BTS1Q12051 335 aa1.33□□□□□ -2.2
SSK2YNR031C YDL180WQ12301 547 aa1.33□□□□□ -2.2
SSK2YNR031C RPL13AQ12690 199 aaPredicted RBP1.33□□□□□ -2.2
SSK2YNR031C YJR112W-AQ3E743 109 aa1.33□□□□□ -2.2
SSK2YNR031C RAD10P06838 210 aa1.32□□□□□ -2.2
SSK2YNR031C TAH1P25638 111 aaPredicted RBP1.32□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 39 ms