RNA–Protein interactions for RNA: YNL260C

LTO1, Transcript of Essential protein that forms a complex with Rli1p and Yae1p, yeast

Gene LTO1, Length 597 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LTO1	YNL260C	CLP1	Q08685	445 aa	Predicted RBP	3.09	□□□□□ -1.91
LTO1	YNL260C	NIP7	Q08962	181 aa	Known RBP	3.09	□□□□□ -1.91
LTO1	YNL260C	DPM1	P14020	267 aa	Known RBP	3.08	□□□□□ -1.92
LTO1	YNL260C	YPT52	P36018	234 aa	Known RBP	3.08	□□□□□ -1.92
LTO1	YNL260C	YHR125W	P38831	101 aa		3.08	□□□□□ -1.92
LTO1	YNL260C	YMD8	Q03697	442 aa		3.08	□□□□□ -1.92
LTO1	YNL260C	YHR032W-A	P0C5N6	59 aa		3.07	□□□□□ -1.92
LTO1	YNL260C	OAC1	P32332	324 aa		3.07	□□□□□ -1.92
LTO1	YNL260C	RPF1	P38805	295 aa	Known RBP	3.07	□□□□□ -1.92
LTO1	YNL260C	IKI1	P38874	309 aa		3.07	□□□□□ -1.92
LTO1	YNL260C	YAR068W	P39564	161 aa		3.07	□□□□□ -1.92
LTO1	YNL260C	IRC18	P47056	224 aa		3.07	□□□□□ -1.92
LTO1	YNL260C	YJL016W	P47072	561 aa		3.07	□□□□□ -1.92
LTO1	YNL260C	GIM3	P53900	129 aa		3.07	□□□□□ -1.92
LTO1	YNL260C	ABF2	Q02486	183 aa		3.07	□□□□□ -1.92
LTO1	YNL260C	YDR248C	Q03786	193 aa		3.07	□□□□□ -1.92
LTO1	YNL260C	ATG39	Q06159	398 aa		3.07	□□□□□ -1.92
LTO1	YNL260C	LSO2	Q3E772	92 aa	Known RBP	3.07	□□□□□ -1.92
LTO1	YNL260C	RFA3	P26755	122 aa	Known RBP	3.06	□□□□□ -1.92
LTO1	YNL260C	TIF34	P40217	347 aa	Known RBP	3.06	□□□□□ -1.92
LTO1	YNL260C	HRT1	Q08273	121 aa		3.06	□□□□□ -1.92
LTO1	YNL260C	TUS1	Q06412	1307 aa		3.05	□□□□□ -1.92
LTO1	YNL260C	Q0255	P03881	472 aa		3.05	□□□□□ -1.92
LTO1	YNL260C	MGM101	P32787	269 aa	Known RBP	3.05	□□□□□ -1.92
LTO1	YNL260C	VMA11	P32842	164 aa		3.05	□□□□□ -1.92
LTO1	YNL260C	YBR063C	P38083	404 aa		3.05	□□□□□ -1.92
LTO1	YNL260C	COG3	P40094	801 aa		3.05	□□□□□ -1.92
LTO1	YNL260C	PDR17	P53844	350 aa		3.05	□□□□□ -1.92
LTO1	YNL260C	YMR279C	Q03263	540 aa		3.05	□□□□□ -1.92
LTO1	YNL260C	MIX17	Q03667	156 aa		3.05	□□□□□ -1.92
LTO1	YNL260C	JIP3	O13555	125 aa		3.04	□□□□□ -1.92
LTO1	YNL260C	RPL27A	P0C2H6	136 aa	Known RBP	3.04	□□□□□ -1.92
LTO1	YNL260C	RPL27B	P0C2H7	136 aa	Known RBP	3.04	□□□□□ -1.92
LTO1	YNL260C	YPR170W-B	P0C5R9	85 aa		3.04	□□□□□ -1.92
LTO1	YNL260C	GCN3	P14741	305 aa		3.04	□□□□□ -1.92
LTO1	YNL260C	DOG2	P38773	246 aa		3.04	□□□□□ -1.92
LTO1	YNL260C	DOG1	P38774	246 aa		3.04	□□□□□ -1.92
LTO1	YNL260C	FAR7	P43592	221 aa		3.04	□□□□□ -1.92
LTO1	YNL260C	RPA43	P46669	326 aa		3.04	□□□□□ -1.92
LTO1	YNL260C	DSK2	P48510	373 aa		3.04	□□□□□ -1.92
LTO1	YNL260C	CAB4	P53332	305 aa		3.04	□□□□□ -1.92
LTO1	YNL260C	SUE1	Q06524	206 aa		3.04	□□□□□ -1.92
LTO1	YNL260C	RAD9	P14737	1309 aa		3.03	□□□□□ -1.92
LTO1	YNL260C	CCA1	P21269	546 aa		3.03	□□□□□ -1.92
LTO1	YNL260C	SPS18	P32572	300 aa		3.03	□□□□□ -1.92
LTO1	YNL260C	APS1	P35181	156 aa		3.03	□□□□□ -1.92
LTO1	YNL260C	MED6	P38782	295 aa		3.03	□□□□□ -1.92
LTO1	YNL260C	BMT5	P40493	336 aa		3.03	□□□□□ -1.92
LTO1	YNL260C	PRM8	P53174	237 aa		3.03	□□□□□ -1.92
LTO1	YNL260C	GET1	P53192	235 aa		3.03	□□□□□ -1.92
LTO1	YNL260C	YGR026W	P53217	278 aa		3.03	□□□□□ -1.92
LTO1	YNL260C	SLM2	P53955	656 aa		3.03	□□□□□ -1.92
LTO1	YNL260C	RPL26A	P05743	127 aa	Known RBP	3.02	□□□□□ -1.93
LTO1	YNL260C	YPK2	P18961	677 aa		3.02	□□□□□ -1.93
LTO1	YNL260C	YJR056C	P47115	236 aa		3.02	□□□□□ -1.93
LTO1	YNL260C	YJR146W	P47174	117 aa		3.02	□□□□□ -1.93
LTO1	YNL260C	RPL26B	P53221	127 aa	Known RBP	3.02	□□□□□ -1.93
LTO1	YNL260C	SCM4	P32564	187 aa		3.01	□□□□□ -1.93
LTO1	YNL260C	YCR087C-A	P37263	153 aa		3.01	□□□□□ -1.93
LTO1	YNL260C	ECM33	P38248	429 aa	Known RBP	3.01	□□□□□ -1.93
LTO1	YNL260C	YHL026C	P38740	315 aa		3.01	□□□□□ -1.93
LTO1	YNL260C	NOP19	P53317	196 aa	Predicted RBP	3.01	□□□□□ -1.93
LTO1	YNL260C	LPP1	Q04396	274 aa		3.01	□□□□□ -1.93
LTO1	YNL260C	ATG38	Q05789	226 aa	Known RBP	3.01	□□□□□ -1.93
LTO1	YNL260C	ABP140	Q08641	628 aa	Known RBP	3.01	□□□□□ -1.93
LTO1	YNL260C	MHT1	Q12525	324 aa		3.01	□□□□□ -1.93
LTO1	YNL260C	YCL012C	Q8J0M4	134 aa		3.01	□□□□□ -1.93
LTO1	YNL260C	SAC3	P46674	1301 aa		3	□□□□□ -1.93
LTO1	YNL260C	UTR5	P32630	166 aa		3	□□□□□ -1.93
LTO1	YNL260C	GRE3	P38715	327 aa	Known RBP RIP-Chip data	3	□□□□□ -1.93	not detected
LTO1	YNL260C	YIL001W	P40560	513 aa		3	□□□□□ -1.93
LTO1	YNL260C	SNX4	P47057	423 aa		3	□□□□□ -1.93
LTO1	YNL260C	AKR2	Q12013	749 aa		3	□□□□□ -1.93
LTO1	YNL260C	TDA8	Q6B2U8	126 aa		3	□□□□□ -1.93
LTO1	YNL260C	ATG22	P25568	528 aa		2.99	□□□□□ -1.93
LTO1	YNL260C	TRM5	P38793	499 aa		2.99	□□□□□ -1.93
LTO1	YNL260C	IRC22	P40006	225 aa		2.99	□□□□□ -1.93
LTO1	YNL260C	DID2	P69771	204 aa		2.99	□□□□□ -1.93
LTO1	YNL260C	CDD1	Q06549	142 aa		2.99	□□□□□ -1.93
LTO1	YNL260C	CHD1	P32657	1468 aa		2.98	□□□□□ -1.93
LTO1	YNL260C	QCR7	P00128	127 aa		2.98	□□□□□ -1.93
LTO1	YNL260C	RPL9A	P05738	191 aa	Known RBP	2.98	□□□□□ -1.93
LTO1	YNL260C	APA2	P22108	325 aa		2.98	□□□□□ -1.93
LTO1	YNL260C	RMD6	P39975	231 aa		2.98	□□□□□ -1.93
LTO1	YNL260C	SMD3	P43321	101 aa	Known RBP	2.98	□□□□□ -1.93
LTO1	YNL260C	RPL9B	P51401	191 aa	Known RBP	2.98	□□□□□ -1.93
LTO1	YNL260C	YNL010W	P53981	241 aa	Known RBP	2.98	□□□□□ -1.93
LTO1	YNL260C	DIA1	P54005	336 aa		2.98	□□□□□ -1.93
LTO1	YNL260C	GAS3	Q03655	524 aa		2.98	□□□□□ -1.93
LTO1	YNL260C	VPS68	Q12016	184 aa		2.98	□□□□□ -1.93
LTO1	YNL260C	MDM32	Q12171	622 aa		2.98	□□□□□ -1.93
LTO1	YNL260C	YHR214C-E	Q8TGK0	99 aa		2.98	□□□□□ -1.93
LTO1	YNL260C	MER1	P16523	270 aa		2.97	□□□□□ -1.93
LTO1	YNL260C	CLB6	P32943	380 aa		2.97	□□□□□ -1.93
LTO1	YNL260C	CTR2	P38865	189 aa		2.97	□□□□□ -1.93
LTO1	YNL260C	YRB2	P40517	327 aa		2.97	□□□□□ -1.93
LTO1	YNL260C	MRPL49	P40858	161 aa	Predicted RBP	2.97	□□□□□ -1.93
LTO1	YNL260C	CDC8	P00572	216 aa		2.96	□□□□□ -1.94
LTO1	YNL260C	SKG1	P36169	355 aa		2.96	□□□□□ -1.94
LTO1	YNL260C	COS6	P53344	381 aa		2.96	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 40.7 ms