RNA–Protein interactions for RNA: YNL016W

PUB1, Transcript of Poly (A)+ RNA-binding protein, yeastyeast

Gene PUB1, Length 1,362 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUB1YNL016W KTI12P34253 313 aaKnown RBP3.34□□□□□ -1.88
PUB1YNL016W CLG1P35190 452 aa3.34□□□□□ -1.88
PUB1YNL016W MRPL28P36527 147 aa3.34□□□□□ -1.88
PUB1YNL016W MIX23P38162 196 aa3.34□□□□□ -1.88
PUB1YNL016W MED8P38304 223 aa3.34□□□□□ -1.88
PUB1YNL016W ARC40P38328 384 aaKnown RBP3.34□□□□□ -1.88
PUB1YNL016W PET8P38921 284 aa3.34□□□□□ -1.88
PUB1YNL016W COX14P39103 70 aa3.34□□□□□ -1.88
PUB1YNL016W VMA10P48836 114 aaKnown RBP3.34□□□□□ -1.88
PUB1YNL016W YGL235WP53071 178 aa3.34□□□□□ -1.88
PUB1YNL016W TIM13P53299 105 aa3.34□□□□□ -1.88
PUB1YNL016W EMI1Q04406 187 aa3.34□□□□□ -1.88
PUB1YNL016W ORM2Q06144 216 aa3.34□□□□□ -1.88
PUB1YNL016W YPR091CQ06833 770 aa3.34□□□□□ -1.88
PUB1YNL016W YLR050CQ12155 161 aaKnown RBP3.34□□□□□ -1.88
PUB1YNL016W COX5AP00424 153 aa3.33□□□□□ -1.88
PUB1YNL016W EPT1P22140 391 aa3.33□□□□□ -1.88
PUB1YNL016W MGT1P26188 188 aa3.33□□□□□ -1.88
PUB1YNL016W CAT2P32796 670 aaKnown RBP3.33□□□□□ -1.88
PUB1YNL016W YET1P35723 206 aa3.33□□□□□ -1.88
PUB1YNL016W SRY1P36007 326 aa3.33□□□□□ -1.88
PUB1YNL016W YKR041WP36134 250 aa3.33□□□□□ -1.88
PUB1YNL016W MTC6P38849 526 aa3.33□□□□□ -1.88
PUB1YNL016W CHL4P38907 458 aa3.33□□□□□ -1.88
PUB1YNL016W CYC2P38909 366 aa3.33□□□□□ -1.88
PUB1YNL016W YIL029CP40538 142 aa3.33□□□□□ -1.88
PUB1YNL016W MDV1P47025 714 aa3.33□□□□□ -1.88
PUB1YNL016W GTR2P53290 341 aa3.33□□□□□ -1.88
PUB1YNL016W IDP3P53982 420 aaKnown RBP3.33□□□□□ -1.88
PUB1YNL016W TPS1Q00764 495 aaKnown RBP3.33□□□□□ -1.88
PUB1YNL016W YET2Q04210 160 aa3.33□□□□□ -1.88
PUB1YNL016W YLR030WQ07967 263 aa3.33□□□□□ -1.88
PUB1YNL016W YOR283WQ12040 230 aaKnown RBP3.33□□□□□ -1.88
PUB1YNL016W TFC7Q12415 435 aa3.33□□□□□ -1.88
PUB1YNL016W EAF3Q12432 401 aa3.33□□□□□ -1.88
PUB1YNL016W MRX4Q12467 430 aa3.33□□□□□ -1.88
PUB1YNL016W EFG1Q3E705 233 aaKnown RBP3.33□□□□□ -1.88
PUB1YNL016W DBF2P22204 572 aa3.32□□□□□ -1.88
PUB1YNL016W URE2P23202 354 aaKnown RBP3.32□□□□□ -1.88
PUB1YNL016W MIR1P23641 311 aaKnown RBP3.32□□□□□ -1.88
PUB1YNL016W RNA14P25298 677 aaKnown RBP3.32□□□□□ -1.88
PUB1YNL016W TIP20P33891 701 aa3.32□□□□□ -1.88
PUB1YNL016W YBR062CP38239 180 aa3.32□□□□□ -1.88
PUB1YNL016W ECM33P38248 429 aaKnown RBP3.32□□□□□ -1.88
PUB1YNL016W AIM18P38884 321 aa3.32□□□□□ -1.88
PUB1YNL016W MOB2P43563 287 aa3.32□□□□□ -1.88
PUB1YNL016W BUD13P46947 266 aaPredicted RBP3.32□□□□□ -1.88
PUB1YNL016W YGL204CP53089 101 aa3.32□□□□□ -1.88
PUB1YNL016W TPC1P53257 314 aa3.32□□□□□ -1.88
PUB1YNL016W COS6P53344 381 aa3.32□□□□□ -1.88
PUB1YNL016W SDC1Q03323 175 aa3.32□□□□□ -1.88
PUB1YNL016W TDA1Q03533 586 aa3.32□□□□□ -1.88
PUB1YNL016W YDR248CQ03786 193 aa3.32□□□□□ -1.88
PUB1YNL016W UTP15Q04305 513 aaKnown RBP3.32□□□□□ -1.88
PUB1YNL016W SPG4Q04438 115 aa3.32□□□□□ -1.88
PUB1YNL016W SPC24Q04477 213 aa3.32□□□□□ -1.88
PUB1YNL016W FCY22Q12119 530 aa3.32□□□□□ -1.88
PUB1YNL016W RPS18AP0CX55 146 aaKnown RBP3.31□□□□□ -1.88
PUB1YNL016W RPS18BP0CX56 146 aaPredicted RBP3.31□□□□□ -1.88
PUB1YNL016W YCL042WP25572 119 aa3.31□□□□□ -1.88
PUB1YNL016W ATG15P25641 520 aa3.31□□□□□ -1.88
PUB1YNL016W ARO7P32178 256 aa3.31□□□□□ -1.88
PUB1YNL016W HYR1P40581 163 aaKnown RBP3.31□□□□□ -1.88
PUB1YNL016W OST1P41543 476 aaKnown RBP3.31□□□□□ -1.88
PUB1YNL016W AZF1P41696 914 aa3.31□□□□□ -1.88
PUB1YNL016W PRM10P42946 383 aa3.31□□□□□ -1.88
PUB1YNL016W LCB3P47013 409 aa3.31□□□□□ -1.88
PUB1YNL016W COG5P53951 403 aa3.31□□□□□ -1.88
PUB1YNL016W RSC9Q03124 581 aa3.31□□□□□ -1.88
PUB1YNL016W LDB18Q07887 179 aa3.31□□□□□ -1.88
PUB1YNL016W ERV2Q12284 196 aa3.31□□□□□ -1.88
PUB1YNL016W RDI1Q12434 202 aa3.31□□□□□ -1.88
PUB1YNL016W STT4P37297 1900 aa3.3□□□□□ -1.88
PUB1YNL016W CPA1P07258 411 aaKnown RBP3.3□□□□□ -1.88
PUB1YNL016W RPS28BP0C0X0 67 aaKnown RBP3.3□□□□□ -1.88
PUB1YNL016W GCN3P14741 305 aa3.3□□□□□ -1.88
PUB1YNL016W GPX1P36014 167 aa3.3□□□□□ -1.88
PUB1YNL016W MRP21P38175 177 aa3.3□□□□□ -1.88
PUB1YNL016W MBA1P38300 278 aa3.3□□□□□ -1.88
PUB1YNL016W VMA22P38784 181 aa3.3□□□□□ -1.88
PUB1YNL016W PEX22P39718 180 aa3.3□□□□□ -1.88
PUB1YNL016W OXA1P39952 402 aa3.3□□□□□ -1.88
PUB1YNL016W YER076CP40049 302 aa3.3□□□□□ -1.88
PUB1YNL016W CWC25P53854 179 aaKnown RBP3.3□□□□□ -1.88
PUB1YNL016W YMR254CQ04838 102 aa3.3□□□□□ -1.88
PUB1YNL016W LIP2Q06005 328 aa3.3□□□□□ -1.88
PUB1YNL016W YPR127WQ06494 345 aa3.3□□□□□ -1.88
PUB1YNL016W OSW1Q08692 278 aa3.3□□□□□ -1.88
PUB1YNL016W YPL245WQ12179 454 aaKnown RBP3.3□□□□□ -1.88
PUB1YNL016W SFM1Q12314 213 aa3.3□□□□□ -1.88
PUB1YNL016W HTZ1Q12692 134 aaKnown RBP3.3□□□□□ -1.88
PUB1YNL016W RPS28AQ3E7X9 67 aaPredicted RBP3.3□□□□□ -1.88
PUB1YNL016W YPL229WQ99395 206 aa3.3□□□□□ -1.88
PUB1YNL016W CDC28P00546 298 aaKnown RBP3.29□□□□□ -1.88
PUB1YNL016W MRS1P07266 363 aa3.29□□□□□ -1.88
PUB1YNL016W RPL42AP0CX27 106 aaKnown RBP3.29□□□□□ -1.88
PUB1YNL016W RPL42BP0CX28 106 aaKnown RBP3.29□□□□□ -1.88
PUB1YNL016W PET54P10834 293 aa3.29□□□□□ -1.88
PUB1YNL016W ATR1P13090 542 aa3.29□□□□□ -1.88
PUB1YNL016W CUP2P15315 225 aa3.29□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms