RNA–Protein interactions for RNA: YDR254W

CHL4, Transcript of Outer kinetochore protein required for chromosome stability, yeast

Gene CHL4, Length 1,377 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CHL4	YDR254W	AHC2	P25649	128 aa		5.06	□□□□□ -1.6
CHL4	YDR254W	YCR090C	P25654	182 aa	Known RBP	5.06	□□□□□ -1.6
CHL4	YDR254W	COQ3	P27680	312 aa		5.06	□□□□□ -1.6
CHL4	YDR254W	YMC1	P32331	307 aa		5.06	□□□□□ -1.6
CHL4	YDR254W	YNK1	P36010	153 aa	Known RBP	5.06	□□□□□ -1.6
CHL4	YDR254W	AYR1	P40471	297 aa		5.06	□□□□□ -1.6
CHL4	YDR254W	RPS12	P48589	143 aa	Known RBP	5.06	□□□□□ -1.6
CHL4	YDR254W	ARO8	P53090	500 aa	Known RBP	5.06	□□□□□ -1.6
CHL4	YDR254W	HST4	P53688	370 aa		5.06	□□□□□ -1.6
CHL4	YDR254W	THI20	Q08224	551 aa		5.06	□□□□□ -1.6
CHL4	YDR254W	FDH1	Q08911	376 aa		5.06	□□□□□ -1.6
CHL4	YDR254W	RPL2A	P0CX45	254 aa	Known RBP	5.05	□□□□□ -1.6
CHL4	YDR254W	RPL2B	P0CX46	254 aa	Known RBP	5.05	□□□□□ -1.6
CHL4	YDR254W	CAP2	P13517	287 aa		5.05	□□□□□ -1.6
CHL4	YDR254W	MDM10	P18409	493 aa		5.05	□□□□□ -1.6
CHL4	YDR254W	ERD2	P18414	219 aa		5.05	□□□□□ -1.6
CHL4	YDR254W	SNC1	P31109	117 aa		5.05	□□□□□ -1.6
CHL4	YDR254W	ERG24	P32462	438 aa	Known RBP	5.05	□□□□□ -1.6
CHL4	YDR254W	LSM12	P38828	187 aa	Known RBP	5.05	□□□□□ -1.6
CHL4	YDR254W	AIM18	P38884	321 aa		5.05	□□□□□ -1.6
CHL4	YDR254W	CHL4	P38907	458 aa		5.05	□□□□□ -1.6
CHL4	YDR254W	YEA4	P40004	342 aa		5.05	□□□□□ -1.6
CHL4	YDR254W	YAE1	P47118	141 aa	Predicted RBP	5.05	□□□□□ -1.6
CHL4	YDR254W	ORC5	P50874	479 aa		5.05	□□□□□ -1.6
CHL4	YDR254W	TIM13	P53299	105 aa		5.05	□□□□□ -1.6
CHL4	YDR254W	ATP23	P53722	227 aa		5.05	□□□□□ -1.6
CHL4	YDR254W	NHP10	Q03435	203 aa		5.05	□□□□□ -1.6
CHL4	YDR254W	SCS7	Q03529	384 aa		5.05	□□□□□ -1.6
CHL4	YDR254W	YTH1	Q06102	208 aa	Predicted RBP	5.05	□□□□□ -1.6
CHL4	YDR254W	RRG7	Q08774	242 aa	Predicted RBP	5.05	□□□□□ -1.6
CHL4	YDR254W	YAL064W-B	O13512	126 aa		5.04	□□□□□ -1.6
CHL4	YDR254W	HAP2	P06774	265 aa		5.04	□□□□□ -1.6
CHL4	YDR254W	YGL041W-A	P0C5N3	154 aa		5.04	□□□□□ -1.6
CHL4	YDR254W	YCR007C	P25354	239 aa		5.04	□□□□□ -1.6
CHL4	YDR254W	APS1	P35181	156 aa		5.04	□□□□□ -1.6
CHL4	YDR254W	GVP36	P40531	326 aa	Known RBP	5.04	□□□□□ -1.6
CHL4	YDR254W	YNR048W	P53740	393 aa		5.04	□□□□□ -1.6
CHL4	YDR254W	HHT1	P61830	136 aa		5.04	□□□□□ -1.6
CHL4	YDR254W	PET191	Q02772	108 aa		5.04	□□□□□ -1.6
CHL4	YDR254W	COF1	Q03048	143 aa	Known RBP	5.04	□□□□□ -1.6
CHL4	YDR254W	TMA23	Q03525	211 aa		5.04	□□□□□ -1.6
CHL4	YDR254W	GMC1	Q04399	608 aa		5.04	□□□□□ -1.6
CHL4	YDR254W	YLR446W	Q06204	433 aa		5.04	□□□□□ -1.6
CHL4	YDR254W	SHH4	Q06236	168 aa		5.04	□□□□□ -1.6
CHL4	YDR254W	FSF1	Q12029	327 aa	Known RBP	5.04	□□□□□ -1.6
CHL4	YDR254W	YLR099W-A	Q3E798	87 aa		5.04	□□□□□ -1.6
CHL4	YDR254W	UBI4	P0CG63	381 aa	Known RBP	5.04	□□□□□ -1.6
CHL4	YDR254W	SNF4	P12904	322 aa		5.04	□□□□□ -1.6
CHL4	YDR254W	ILV6	P25605	309 aa	Known RBP	5.04	□□□□□ -1.6
CHL4	YDR254W	TRS65	P32893	560 aa		5.04	□□□□□ -1.6
CHL4	YDR254W	PMU1	P36069	295 aa		5.04	□□□□□ -1.6
CHL4	YDR254W	YPT31	P38555	223 aa	Known RBP	5.04	□□□□□ -1.6
CHL4	YDR254W	XBP1	P40489	647 aa		5.04	□□□□□ -1.6
CHL4	YDR254W	YFL015C	P43578	164 aa		5.04	□□□□□ -1.6
CHL4	YDR254W	BUD13	P46947	266 aa	Predicted RBP	5.04	□□□□□ -1.6
CHL4	YDR254W	SDT1	P53078	280 aa		5.04	□□□□□ -1.6
CHL4	YDR254W	YGL101W	P53144	215 aa		5.04	□□□□□ -1.6
CHL4	YDR254W	ARK1	P53974	638 aa		5.04	□□□□□ -1.6
CHL4	YDR254W	AIM36	Q03798	255 aa		5.04	□□□□□ -1.6
CHL4	YDR254W	ERP1	Q05359	219 aa	Known RBP	5.04	□□□□□ -1.6
CHL4	YDR254W	LIP2	Q06005	328 aa		5.04	□□□□□ -1.6
CHL4	YDR254W	PDR15	Q04182	1529 aa	Known RBP	5.03	□□□□□ -1.6
CHL4	YDR254W	IPP1	P00817	287 aa	Known RBP	5.03	□□□□□ -1.6
CHL4	YDR254W	YAR066W	P0CX18	203 aa		5.03	□□□□□ -1.6
CHL4	YDR254W	YHR214W	P0CX19	203 aa		5.03	□□□□□ -1.6
CHL4	YDR254W	RPC19	P28000	142 aa	Known RBP	5.03	□□□□□ -1.6
CHL4	YDR254W	SRL3	P36167	246 aa		5.03	□□□□□ -1.6
CHL4	YDR254W	MRPL39	P36533	70 aa		5.03	□□□□□ -1.6
CHL4	YDR254W	ARN1	P38731	627 aa		5.03	□□□□□ -1.6
CHL4	YDR254W	APQ12	P40532	138 aa		5.03	□□□□□ -1.6
CHL4	YDR254W	MIC19	P43594	170 aa		5.03	□□□□□ -1.6
CHL4	YDR254W	MNN5	P46982	586 aa		5.03	□□□□□ -1.6
CHL4	YDR254W	LSM7	P53905	115 aa	Known RBP	5.03	□□□□□ -1.6
CHL4	YDR254W	DIC1	Q06143	298 aa		5.03	□□□□□ -1.6
CHL4	YDR254W	SPP41	P38904	1435 aa		5.02	□□□□□ -1.61
CHL4	YDR254W	RPL7A	P05737	244 aa	Known RBP	5.02	□□□□□ -1.61
CHL4	YDR254W	PCL1	P24867	279 aa		5.02	□□□□□ -1.61
CHL4	YDR254W	PRY2	P36110	329 aa		5.02	□□□□□ -1.61
CHL4	YDR254W	MRPL15	P36523	253 aa		5.02	□□□□□ -1.61
CHL4	YDR254W	MRP21	P38175	177 aa		5.02	□□□□□ -1.61
CHL4	YDR254W	CFD1	P40558	293 aa		5.02	□□□□□ -1.61
CHL4	YDR254W	OST2	P46964	130 aa		5.02	□□□□□ -1.61
CHL4	YDR254W	GWT1	P47026	490 aa		5.02	□□□□□ -1.61
CHL4	YDR254W	SLM2	P53955	656 aa		5.02	□□□□□ -1.61
CHL4	YDR254W	LSM3	P57743	89 aa	Known RBP	5.02	□□□□□ -1.61
CHL4	YDR254W	YDL218W	Q07629	317 aa		5.02	□□□□□ -1.61
CHL4	YDR254W	OSW1	Q08692	278 aa		5.02	□□□□□ -1.61
CHL4	YDR254W	FRE8	Q12209	686 aa		5.02	□□□□□ -1.61
CHL4	YDR254W	RPL7B	Q12213	244 aa	Known RBP	5.02	□□□□□ -1.61
CHL4	YDR254W	MHP1	P43638	1398 aa		5.01	□□□□□ -1.61
CHL4	YDR254W	TY2B-LR1	P0C2J3	1770 aa		5.01	□□□□□ -1.61
CHL4	YDR254W	TY2B-F	P0CX63	1770 aa		5.01	□□□□□ -1.61
CHL4	YDR254W	TY2B-GR2	P0CX64	1770 aa		5.01	□□□□□ -1.61
CHL4	YDR254W	TY2B-C	P25384	1770 aa		5.01	□□□□□ -1.61
CHL4	YDR254W	TY2B-DR2	Q03494	1770 aa		5.01	□□□□□ -1.61
CHL4	YDR254W	TY1B-DR1	Q03855	1755 aa		5.01	□□□□□ -1.61
CHL4	YDR254W	TY2B-DR3	Q07791	1770 aa	Known RBP	5.01	□□□□□ -1.61
CHL4	YDR254W	TY2B-OR1	Q12113	1770 aa		5.01	□□□□□ -1.61
CHL4	YDR254W	TY2B-DR1	Q12472	1770 aa		5.01	□□□□□ -1.61
CHL4	YDR254W	TY2B-OR2	Q12501	1770 aa		5.01	□□□□□ -1.61

Retrieved 100 of 5,963 RNA–protein pairs in 39.9 ms