RNA–Protein interactions for RNA: YDR171W

HSP42, Transcript of Small heat shock protein (sHSP) with chaperone activity, yeastyeast

Gene HSP42, Length 1,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSP42YDR171W PNC1P53184 216 aaKnown RBP3.68□□□□□ -1.82
HSP42YDR171W VHT1P53241 593 aa3.68□□□□□ -1.82
HSP42YDR171W TRM112P53738 135 aaPredicted RBP3.68□□□□□ -1.82
HSP42YDR171W ACT1P60010 375 aaKnown RBP3.68□□□□□ -1.82
HSP42YDR171W PIR3Q03180 325 aa3.68□□□□□ -1.82
HSP42YDR171W CCE1Q03702 353 aa3.68□□□□□ -1.82
HSP42YDR171W BER1Q06688 274 aaKnown RBP3.68□□□□□ -1.82
HSP42YDR171W DCI1Q08558 271 aa3.68□□□□□ -1.82
HSP42YDR171W MMT2Q08970 484 aa3.68□□□□□ -1.82
HSP42YDR171W RAD28Q12021 506 aa3.68□□□□□ -1.82
HSP42YDR171W FCF2Q12035 217 aaPredicted RBP3.68□□□□□ -1.82
HSP42YDR171W PAA1Q12447 191 aaKnown RBP3.68□□□□□ -1.82
HSP42YDR171W TDH2P00358 332 aaKnown RBP3.67□□□□□ -1.82
HSP42YDR171W RPL15AP05748 204 aaKnown RBP3.67□□□□□ -1.82
HSP42YDR171W YOL162WP0CF19 215 aa3.67□□□□□ -1.82
HSP42YDR171W CKA1P15790 372 aa3.67□□□□□ -1.82
HSP42YDR171W FUN14P18411 198 aa3.67□□□□□ -1.82
HSP42YDR171W YCR007CP25354 239 aa3.67□□□□□ -1.82
HSP42YDR171W TRX3P25372 127 aa3.67□□□□□ -1.82
HSP42YDR171W SNC2P33328 115 aa3.67□□□□□ -1.82
HSP42YDR171W MRPL28P36527 147 aa3.67□□□□□ -1.82
HSP42YDR171W YHL026CP38740 315 aa3.67□□□□□ -1.82
HSP42YDR171W TRR2P38816 342 aa3.67□□□□□ -1.82
HSP42YDR171W SPC25P40014 221 aa3.67□□□□□ -1.82
HSP42YDR171W MMF1P40185 145 aaKnown RBP3.67□□□□□ -1.82
HSP42YDR171W LYS12P40495 371 aaKnown RBP3.67□□□□□ -1.82
HSP42YDR171W AGE2P40529 298 aa3.67□□□□□ -1.82
HSP42YDR171W IBA57P47158 497 aa3.67□□□□□ -1.82
HSP42YDR171W MGA1P53050 456 aa3.67□□□□□ -1.82
HSP42YDR171W YMR253CQ04835 414 aa3.67□□□□□ -1.82
HSP42YDR171W NDE2Q07500 545 aa3.67□□□□□ -1.82
HSP42YDR171W YDL009CQ12210 107 aa3.67□□□□□ -1.82
HSP42YDR171W FYV7Q12247 151 aa3.67□□□□□ -1.82
HSP42YDR171W YLR118CQ12354 227 aa3.67□□□□□ -1.82
HSP42YDR171W PEX11Q12462 236 aa3.67□□□□□ -1.82
HSP42YDR171W AIM45Q12480 344 aaKnown RBP3.67□□□□□ -1.82
HSP42YDR171W ADK1P07170 222 aaKnown RBP3.66□□□□□ -1.82
HSP42YDR171W ATP5P09457 212 aa3.66□□□□□ -1.82
HSP42YDR171W RPL31BP0C2H9 113 aaKnown RBP3.66□□□□□ -1.82
HSP42YDR171W MTF1P14908 341 aaKnown RBP3.66□□□□□ -1.82
HSP42YDR171W PUT3P25502 979 aaPredicted RBP3.66□□□□□ -1.82
HSP42YDR171W YCR022CP25620 114 aa3.66□□□□□ -1.82
HSP42YDR171W TIP1P27654 210 aaPredicted RBP3.66□□□□□ -1.82
HSP42YDR171W ERG24P32462 438 aaKnown RBP3.66□□□□□ -1.82
HSP42YDR171W CMC1P36064 111 aa3.66□□□□□ -1.82
HSP42YDR171W DRE2P36152 348 aa3.66□□□□□ -1.82
HSP42YDR171W YBR013CP38215 129 aa3.66□□□□□ -1.82
HSP42YDR171W POP7P38291 140 aa3.66□□□□□ -1.82
HSP42YDR171W RTC3P38804 111 aaPredicted RBP3.66□□□□□ -1.82
HSP42YDR171W YEL073CP39974 107 aa3.66□□□□□ -1.82
HSP42YDR171W FLX1P40464 311 aa3.66□□□□□ -1.82
HSP42YDR171W SYS1P41544 203 aa3.66□□□□□ -1.82
HSP42YDR171W NIF3P53081 288 aa3.66□□□□□ -1.82
HSP42YDR171W YGL204CP53089 101 aa3.66□□□□□ -1.82
HSP42YDR171W YGL114WP53134 725 aa3.66□□□□□ -1.82
HSP42YDR171W SLX9P53251 210 aaPredicted RBP3.66□□□□□ -1.82
HSP42YDR171W MPA43P53583 542 aaPredicted RBP3.66□□□□□ -1.82
HSP42YDR171W YIF1P53845 314 aaKnown RBP3.66□□□□□ -1.82
HSP42YDR171W MTQ1P53944 314 aa3.66□□□□□ -1.82
HSP42YDR171W CYT2Q00873 224 aa3.66□□□□□ -1.82
HSP42YDR171W ATC1Q04005 294 aa3.66□□□□□ -1.82
HSP42YDR171W BNA5Q05979 453 aa3.66□□□□□ -1.82
HSP42YDR171W MRPL51Q06090 140 aaPredicted RBP3.66□□□□□ -1.82
HSP42YDR171W MRX9Q07349 420 aaKnown RBP3.66□□□□□ -1.82
HSP42YDR171W COX19Q3E731 98 aa3.66□□□□□ -1.82
HSP42YDR171W MEX67Q99257 599 aaKnown RBP3.66□□□□□ -1.82
HSP42YDR171W SPS4P09937 338 aa3.65□□□□□ -1.83
HSP42YDR171W RPL31AP0C2H8 113 aaKnown RBP3.65□□□□□ -1.83
HSP42YDR171W MCK1P21965 375 aaKnown RBP3.65□□□□□ -1.83
HSP42YDR171W PPH21P23594 369 aa3.65□□□□□ -1.83
HSP42YDR171W GPI12P23797 304 aa3.65□□□□□ -1.83
HSP42YDR171W CPR4P25334 318 aa3.65□□□□□ -1.83
HSP42YDR171W YCR101CP25607 182 aa3.65□□□□□ -1.83
HSP42YDR171W POT1P27796 417 aaKnown RBP RIP-Chip data3.65□□□□□ -1.83not detected
HSP42YDR171W FUN19P28003 413 aaPredicted RBP3.65□□□□□ -1.83
HSP42YDR171W IDH2P28241 369 aaKnown RBP3.65□□□□□ -1.83
HSP42YDR171W EHD3P28817 500 aa3.65□□□□□ -1.83
HSP42YDR171W TRR1P29509 319 aaKnown RBP3.65□□□□□ -1.83
HSP42YDR171W YEF1P32622 495 aa3.65□□□□□ -1.83
HSP42YDR171W CSE2P33308 149 aa3.65□□□□□ -1.83
HSP42YDR171W MSN4P33749 630 aa3.65□□□□□ -1.83
HSP42YDR171W PAN3P36102 679 aaPredicted RBP3.65□□□□□ -1.83
HSP42YDR171W MRPL27P36526 146 aaPredicted RBP3.65□□□□□ -1.83
HSP42YDR171W CBP4P37267 147 aa3.65□□□□□ -1.83
HSP42YDR171W RIB5P38145 238 aa3.65□□□□□ -1.83
HSP42YDR171W TRS20P38334 175 aa3.65□□□□□ -1.83
HSP42YDR171W INM1P38710 295 aa3.65□□□□□ -1.83
HSP42YDR171W YHR127WP38833 243 aaKnown RBP3.65□□□□□ -1.83
HSP42YDR171W RPL13BP40212 199 aaKnown RBP3.65□□□□□ -1.83
HSP42YDR171W RPR2P40571 144 aa3.65□□□□□ -1.83
HSP42YDR171W UFE1P41834 346 aa3.65□□□□□ -1.83
HSP42YDR171W RPA34P47006 233 aaPredicted RBP3.65□□□□□ -1.83
HSP42YDR171W COX16P47081 118 aa3.65□□□□□ -1.83
HSP42YDR171W YJR056CP47115 236 aa3.65□□□□□ -1.83
HSP42YDR171W YGR042WP53227 271 aa3.65□□□□□ -1.83
HSP42YDR171W EST3Q03096 181 aa3.65□□□□□ -1.83
HSP42YDR171W TMA23Q03525 211 aa3.65□□□□□ -1.83
HSP42YDR171W SEC13Q04491 297 aaKnown RBP3.65□□□□□ -1.83
HSP42YDR171W AVO2Q04749 426 aa3.65□□□□□ -1.83
HSP42YDR171W YMR310CQ04867 317 aaPredicted RBP3.65□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 28.5 ms