RNA–Protein interactions for RNA: YDL201W

TRM8, Transcript of Noncatalytic subunit of a tRNA methyltransferase complex, yeast

Gene TRM8, Length 861 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRM8	YDL201W	PRY2	P36110	329 aa		4.06	□□□□□ -1.76
TRM8	YDL201W	SMX2	P40204	77 aa	Known RBP	4.06	□□□□□ -1.76
TRM8	YDL201W	PAN6	P40459	309 aa		4.06	□□□□□ -1.76
TRM8	YDL201W	YGR201C	P42936	225 aa		4.06	□□□□□ -1.76
TRM8	YDL201W	RRT5	P43607	289 aa		4.06	□□□□□ -1.76
TRM8	YDL201W	CCC1	P47818	322 aa		4.06	□□□□□ -1.76
TRM8	YDL201W	SCS3	P53012	380 aa		4.06	□□□□□ -1.76
TRM8	YDL201W	RCF2	P53721	224 aa		4.06	□□□□□ -1.76
TRM8	YDL201W	IMP4	P53941	290 aa	Known RBP	4.06	□□□□□ -1.76
TRM8	YDL201W	HNT1	Q04344	158 aa	Known RBP	4.06	□□□□□ -1.76
TRM8	YDL201W	GAS2	Q06135	555 aa		4.06	□□□□□ -1.76
TRM8	YDL201W	PEX11	Q12462	236 aa		4.06	□□□□□ -1.76
TRM8	YDL201W	IGO2	Q9P305	131 aa		4.06	□□□□□ -1.76
TRM8	YDL201W	YMR316C-A	I2HB70	103 aa		4.05	□□□□□ -1.76
TRM8	YDL201W	COX4	P04037	155 aa		4.05	□□□□□ -1.76
TRM8	YDL201W	MRS1	P07266	363 aa		4.05	□□□□□ -1.76
TRM8	YDL201W	RPS18A	P0CX55	146 aa	Known RBP	4.05	□□□□□ -1.76
TRM8	YDL201W	RPS18B	P0CX56	146 aa	Predicted RBP	4.05	□□□□□ -1.76
TRM8	YDL201W	CUP2	P15315	225 aa		4.05	□□□□□ -1.76
TRM8	YDL201W	DBF2	P22204	572 aa		4.05	□□□□□ -1.76
TRM8	YDL201W	MRPL20	P22354	195 aa	Predicted RBP	4.05	□□□□□ -1.76
TRM8	YDL201W	URA10	P30402	227 aa		4.05	□□□□□ -1.76
TRM8	YDL201W	AGA1	P32323	725 aa		4.05	□□□□□ -1.76
TRM8	YDL201W	TRS65	P32893	560 aa		4.05	□□□□□ -1.76
TRM8	YDL201W	SIP2	P34164	415 aa	Known RBP	4.05	□□□□□ -1.76
TRM8	YDL201W	SSH1	P38353	490 aa	Known RBP	4.05	□□□□□ -1.76
TRM8	YDL201W	ECM14	P38836	430 aa		4.05	□□□□□ -1.76
TRM8	YDL201W	MTC6	P38849	526 aa		4.05	□□□□□ -1.76
TRM8	YDL201W	RMD6	P39975	231 aa		4.05	□□□□□ -1.76
TRM8	YDL201W	SER33	P40510	469 aa		4.05	□□□□□ -1.76
TRM8	YDL201W	GUF1	P46943	645 aa		4.05	□□□□□ -1.76
TRM8	YDL201W	APS3	P47064	194 aa		4.05	□□□□□ -1.76
TRM8	YDL201W	RBL2	P48606	106 aa	Known RBP	4.05	□□□□□ -1.76
TRM8	YDL201W	NRM1	P53718	249 aa		4.05	□□□□□ -1.76
TRM8	YDL201W	SCS7	Q03529	384 aa		4.05	□□□□□ -1.76
TRM8	YDL201W	HPT1	Q04178	221 aa	Known RBP	4.05	□□□□□ -1.76
TRM8	YDL201W	FAR10	Q06001	478 aa		4.05	□□□□□ -1.76
TRM8	YDL201W	RFU1	Q08003	200 aa		4.05	□□□□□ -1.76
TRM8	YDL201W	YGK3	Q12222	375 aa	Predicted RBP	4.05	□□□□□ -1.76
TRM8	YDL201W	MHT1	Q12525	324 aa		4.05	□□□□□ -1.76
TRM8	YDL201W	CDC28	P00546	298 aa	Known RBP	4.04	□□□□□ -1.76
TRM8	YDL201W	RAD10	P06838	210 aa		4.04	□□□□□ -1.76
TRM8	YDL201W	PBI2	P0CT04	75 aa	Known RBP	4.04	□□□□□ -1.76
TRM8	YDL201W	URE2	P23202	354 aa	Known RBP	4.04	□□□□□ -1.76
TRM8	YDL201W	MIR1	P23641	311 aa	Known RBP	4.04	□□□□□ -1.76
TRM8	YDL201W	ARO7	P32178	256 aa		4.04	□□□□□ -1.76
TRM8	YDL201W	APS1	P35181	156 aa		4.04	□□□□□ -1.76
TRM8	YDL201W	YKR041W	P36134	250 aa		4.04	□□□□□ -1.76
TRM8	YDL201W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	4.04	□□□□□ -1.76	not detected
TRM8	YDL201W	POP4	P38336	279 aa		4.04	□□□□□ -1.76
TRM8	YDL201W	MRPL49	P40858	161 aa	Predicted RBP	4.04	□□□□□ -1.76
TRM8	YDL201W	IKS1	P47042	667 aa		4.04	□□□□□ -1.76
TRM8	YDL201W	SYF2	P53277	215 aa	Predicted RBP	4.04	□□□□□ -1.76
TRM8	YDL201W	MPA43	P53583	542 aa	Predicted RBP	4.04	□□□□□ -1.76
TRM8	YDL201W	SUR7	P54003	302 aa		4.04	□□□□□ -1.76
TRM8	YDL201W	TMA20	P89886	181 aa	Predicted RBP	4.04	□□□□□ -1.76
TRM8	YDL201W	PIR3	Q03180	325 aa		4.04	□□□□□ -1.76
TRM8	YDL201W	RAV2	Q03956	351 aa		4.04	□□□□□ -1.76
TRM8	YDL201W	UTP15	Q04305	513 aa	Known RBP	4.04	□□□□□ -1.76
TRM8	YDL201W	RRG7	Q08774	242 aa	Predicted RBP	4.04	□□□□□ -1.76
TRM8	YDL201W	YLR112W	Q12130	139 aa		4.04	□□□□□ -1.76
TRM8	YDL201W	BSC1	Q12140	328 aa		4.04	□□□□□ -1.76
TRM8	YDL201W	YDL199C	Q12407	687 aa		4.04	□□□□□ -1.76
TRM8	YDL201W	SNF4	P12904	322 aa		4.03	□□□□□ -1.76
TRM8	YDL201W	SUA7	P29055	345 aa	Predicted RBP	4.03	□□□□□ -1.76
TRM8	YDL201W	LDS1	P31379	325 aa		4.03	□□□□□ -1.76
TRM8	YDL201W	MIX23	P38162	196 aa		4.03	□□□□□ -1.76
TRM8	YDL201W	RCK1	P38622	512 aa		4.03	□□□□□ -1.76
TRM8	YDL201W	LSM12	P38828	187 aa	Known RBP	4.03	□□□□□ -1.76
TRM8	YDL201W	NVJ1	P38881	321 aa		4.03	□□□□□ -1.76
TRM8	YDL201W	ILM1	P47155	203 aa		4.03	□□□□□ -1.76
TRM8	YDL201W	RMI1	Q02685	241 aa		4.03	□□□□□ -1.76
TRM8	YDL201W	SWP1	Q02795	286 aa		4.03	□□□□□ -1.76
TRM8	YDL201W	YDR415C	Q04033	374 aa	Predicted RBP	4.03	□□□□□ -1.76
TRM8	YDL201W	RAX2	Q12465	1220 aa		4.03	□□□□□ -1.76
TRM8	YDL201W	WIP1	Q2V2P8	89 aa		4.03	□□□□□ -1.76
TRM8	YDL201W	Q0144	Q9ZZW2	109 aa		4.03	□□□□□ -1.76
TRM8	YDL201W	EPT1	P22140	391 aa		4.02	□□□□□ -1.77
TRM8	YDL201W	SRY1	P36007	326 aa		4.02	□□□□□ -1.77
TRM8	YDL201W	SCO2	P38072	301 aa		4.02	□□□□□ -1.77
TRM8	YDL201W	EFM1	P38732	585 aa		4.02	□□□□□ -1.77
TRM8	YDL201W	IPI1	P38803	334 aa	Predicted RBP	4.02	□□□□□ -1.77
TRM8	YDL201W	HEM14	P40012	539 aa		4.02	□□□□□ -1.77
TRM8	YDL201W	GLE2	P40066	365 aa		4.02	□□□□□ -1.77
TRM8	YDL201W	YER186C	P40101	306 aa		4.02	□□□□□ -1.77
TRM8	YDL201W	RRG9	P40156	214 aa		4.02	□□□□□ -1.77
TRM8	YDL201W	HAC1	P41546	238 aa		4.02	□□□□□ -1.77
TRM8	YDL201W	LCB3	P47013	409 aa		4.02	□□□□□ -1.77
TRM8	YDL201W	ALB1	P47019	175 aa	Predicted RBP	4.02	□□□□□ -1.77
TRM8	YDL201W	YJR111C	P47148	283 aa	Known RBP	4.02	□□□□□ -1.77
TRM8	YDL201W	TOS8	P53147	276 aa		4.02	□□□□□ -1.77
TRM8	YDL201W	YGL034C	P53186	121 aa		4.02	□□□□□ -1.77
TRM8	YDL201W	MRX11	Q03079	207 aa		4.02	□□□□□ -1.77
TRM8	YDL201W	MZM1	Q03429	123 aa	Predicted RBP	4.02	□□□□□ -1.77
TRM8	YDL201W	SYC1	Q08553	188 aa	Predicted RBP	4.02	□□□□□ -1.77
TRM8	YDL201W	ATP14	Q12349	124 aa		4.02	□□□□□ -1.77
TRM8	YDL201W	YLR361C-A	Q3E795	98 aa		4.02	□□□□□ -1.77
TRM8	YDL201W	HHF1	P02309	103 aa	Known RBP	4.01	□□□□□ -1.77
TRM8	YDL201W	RPL25	P04456	142 aa	Known RBP	4.01	□□□□□ -1.77
TRM8	YDL201W	DSF1	P0CX08	502 aa		4.01	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 26 ms