RNA–Protein interactions for RNA: YDL084W

SUB2, Transcript of Component of the TREX complex required for nuclear mRNA export, yeast

Gene SUB2, Length 1,341 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUB2	YDL084W	MCP1	Q12106	302 aa		5.21	□□□□□ -1.58
SUB2	YDL084W	PRR2	Q12310	699 aa		5.21	□□□□□ -1.58
SUB2	YDL084W	FRE7	Q12333	620 aa		5.21	□□□□□ -1.58
SUB2	YDL084W	SPO14	P36126	1683 aa		5.2	□□□□□ -1.58
SUB2	YDL084W	CAP2	P13517	287 aa		5.2	□□□□□ -1.58
SUB2	YDL084W	CDC26	P14724	124 aa		5.2	□□□□□ -1.58
SUB2	YDL084W	MBR1	P23493	339 aa		5.2	□□□□□ -1.58
SUB2	YDL084W	YKR041W	P36134	250 aa		5.2	□□□□□ -1.58
SUB2	YDL084W	YHK8	P38776	514 aa		5.2	□□□□□ -1.58
SUB2	YDL084W	RRP4	P38792	359 aa	Known RBP	5.2	□□□□□ -1.58
SUB2	YDL084W	IPT1	P38954	527 aa		5.2	□□□□□ -1.58
SUB2	YDL084W	ELO1	P39540	310 aa		5.2	□□□□□ -1.58
SUB2	YDL084W	HPA3	P39979	161 aa		5.2	□□□□□ -1.58
SUB2	YDL084W	PAN6	P40459	309 aa		5.2	□□□□□ -1.58
SUB2	YDL084W	YIL024C	P40543	189 aa		5.2	□□□□□ -1.58
SUB2	YDL084W	UBC11	P52492	156 aa		5.2	□□□□□ -1.58
SUB2	YDL084W	YNR071C	P53757	342 aa		5.2	□□□□□ -1.58
SUB2	YDL084W	COF1	Q03048	143 aa	Known RBP	5.2	□□□□□ -1.58
SUB2	YDL084W	UPS3	Q04006	179 aa		5.2	□□□□□ -1.58
SUB2	YDL084W	MRX8	Q05473	314 aa		5.2	□□□□□ -1.58
SUB2	YDL084W	ARC18	Q05933	178 aa	Known RBP	5.2	□□□□□ -1.58
SUB2	YDL084W	YLR030W	Q07967	263 aa		5.2	□□□□□ -1.58
SUB2	YDL084W	ENB1	Q08299	606 aa		5.2	□□□□□ -1.58
SUB2	YDL084W	WTM2	Q12206	467 aa		5.2	□□□□□ -1.58
SUB2	YDL084W	RPL7B	Q12213	244 aa	Known RBP	5.2	□□□□□ -1.58
SUB2	YDL084W	ATG5	Q12380	294 aa		5.2	□□□□□ -1.58
SUB2	YDL084W	KTI11	Q3E840	82 aa		5.2	□□□□□ -1.58
SUB2	YDL084W	STE4	P18851	423 aa		5.19	□□□□□ -1.58
SUB2	YDL084W	ANB1	P19211	157 aa		5.19	□□□□□ -1.58
SUB2	YDL084W	EMP24	P32803	203 aa	Known RBP	5.19	□□□□□ -1.58
SUB2	YDL084W	NTF2	P33331	125 aa	Known RBP	5.19	□□□□□ -1.58
SUB2	YDL084W	SFK1	P35735	353 aa		5.19	□□□□□ -1.58
SUB2	YDL084W	YHL049C	P38722	271 aa		5.19	□□□□□ -1.58
SUB2	YDL084W	YHL026C	P38740	315 aa		5.19	□□□□□ -1.58
SUB2	YDL084W	SWM2	P40342	146 aa		5.19	□□□□□ -1.58
SUB2	YDL084W	SSY5	P47002	699 aa		5.19	□□□□□ -1.58
SUB2	YDL084W	AVT1	P47082	602 aa		5.19	□□□□□ -1.58
SUB2	YDL084W	MUP1	P50276	574 aa		5.19	□□□□□ -1.58
SUB2	YDL084W	YIP4	P53093	235 aa		5.19	□□□□□ -1.58
SUB2	YDL084W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	5.19	□□□□□ -1.58	RIP-Chip
SUB2	YDL084W	MRX11	Q03079	207 aa		5.19	□□□□□ -1.58
SUB2	YDL084W	SRT1	Q03175	343 aa		5.19	□□□□□ -1.58
SUB2	YDL084W	TY1A-DR2	Q03964	440 aa	Known RBP	5.19	□□□□□ -1.58
SUB2	YDL084W	ORT1	Q12375	292 aa		5.19	□□□□□ -1.58
SUB2	YDL084W	Q0182	Q9ZZW1	134 aa		5.19	□□□□□ -1.58
SUB2	YDL084W	RAD6	P06104	172 aa		5.18	□□□□□ -1.58
SUB2	YDL084W	CHO1	P08456	276 aa		5.18	□□□□□ -1.58
SUB2	YDL084W	YPR170W-B	P0C5R9	85 aa		5.18	□□□□□ -1.58
SUB2	YDL084W	PEX34	P25584	144 aa		5.18	□□□□□ -1.58
SUB2	YDL084W	YBR241C	P38142	488 aa		5.18	□□□□□ -1.58
SUB2	YDL084W	LSM2	P38203	95 aa	Known RBP	5.18	□□□□□ -1.58
SUB2	YDL084W	POP8	P38208	133 aa		5.18	□□□□□ -1.58
SUB2	YDL084W	LYS1	P38998	373 aa	RIP-Chip data	5.18	□□□□□ -1.58	not detected
SUB2	YDL084W	FAA2	P39518	744 aa		5.18	□□□□□ -1.58
SUB2	YDL084W	YER188W	P40103	239 aa		5.18	□□□□□ -1.58
SUB2	YDL084W	BUD8	P41698	603 aa		5.18	□□□□□ -1.58
SUB2	YDL084W	CTK2	P46962	323 aa		5.18	□□□□□ -1.58
SUB2	YDL084W	UBX6	P47049	396 aa		5.18	□□□□□ -1.58
SUB2	YDL084W	YGL230C	P53074	147 aa		5.18	□□□□□ -1.58
SUB2	YDL084W	YGR015C	P53208	328 aa		5.18	□□□□□ -1.58
SUB2	YDL084W	GPI15	P53961	229 aa		5.18	□□□□□ -1.58
SUB2	YDL084W	NAM8	Q00539	523 aa	Known RBP	5.18	□□□□□ -1.58
SUB2	YDL084W	YDR415C	Q04033	374 aa	Predicted RBP	5.18	□□□□□ -1.58
SUB2	YDL084W	THI74	Q04083	370 aa		5.18	□□□□□ -1.58
SUB2	YDL084W	LRS4	Q04087	347 aa	Known RBP	5.18	□□□□□ -1.58
SUB2	YDL084W	GRH1	Q04410	372 aa	Known RBP	5.18	□□□□□ -1.58
SUB2	YDL084W	SEN15	Q04675	128 aa		5.18	□□□□□ -1.58
SUB2	YDL084W	HEM25	Q07534	307 aa		5.18	□□□□□ -1.58
SUB2	YDL084W	COQ10	Q08058	207 aa		5.18	□□□□□ -1.58
SUB2	YDL084W	YOR387C	Q08910	206 aa		5.18	□□□□□ -1.58
SUB2	YDL084W	FCY1	Q12178	158 aa		5.18	□□□□□ -1.58
SUB2	YDL084W	TY1A-NL1	Q12391	440 aa	Known RBP	5.18	□□□□□ -1.58
SUB2	YDL084W	ERP3	Q12403	225 aa		5.18	□□□□□ -1.58
SUB2	YDL084W	LAS17	Q12446	633 aa		5.18	□□□□□ -1.58
SUB2	YDL084W	SUC2	P00724	532 aa		5.17	□□□□□ -1.58
SUB2	YDL084W	BI2	P03873	423 aa		5.17	□□□□□ -1.58
SUB2	YDL084W	SPS18	P32572	300 aa		5.17	□□□□□ -1.58
SUB2	YDL084W	TKL2	P33315	681 aa		5.17	□□□□□ -1.58
SUB2	YDL084W	SKN1	P33336	771 aa		5.17	□□□□□ -1.58
SUB2	YDL084W	PNT1	P38969	423 aa		5.17	□□□□□ -1.58
SUB2	YDL084W	GAA1	P39012	614 aa		5.17	□□□□□ -1.58
SUB2	YDL084W	SPC25	P40014	221 aa		5.17	□□□□□ -1.58
SUB2	YDL084W	SNM1	P40993	198 aa		5.17	□□□□□ -1.58
SUB2	YDL084W	MCM22	P47167	239 aa		5.17	□□□□□ -1.58
SUB2	YDL084W	SBH1	P52870	82 aa		5.17	□□□□□ -1.58
SUB2	YDL084W	CRZ1	P53968	678 aa		5.17	□□□□□ -1.58
SUB2	YDL084W	YVH1	Q02256	364 aa	Known RBP	5.17	□□□□□ -1.58
SUB2	YDL084W	ERP1	Q05359	219 aa	Known RBP	5.17	□□□□□ -1.58
SUB2	YDL084W	HRI1	Q05905	244 aa	Known RBP	5.17	□□□□□ -1.58
SUB2	YDL084W	SWC7	Q06707	132 aa		5.17	□□□□□ -1.58
SUB2	YDL084W	AIM39	Q08223	395 aa		5.17	□□□□□ -1.58
SUB2	YDL084W	RDL2	Q08742	149 aa	Known RBP	5.17	□□□□□ -1.58
SUB2	YDL084W	YLL058W	Q12198	575 aa		5.17	□□□□□ -1.58
SUB2	YDL084W	MHT1	Q12525	324 aa		5.17	□□□□□ -1.58
SUB2	YDL084W	YLR422W	Q06409	1932 aa		5.16	□□□□□ -1.58
SUB2	YDL084W	YCL002C	P25565	263 aa		5.16	□□□□□ -1.58
SUB2	YDL084W	YCR102C	P25608	368 aa		5.16	□□□□□ -1.58
SUB2	YDL084W	OAC1	P32332	324 aa		5.16	□□□□□ -1.58
SUB2	YDL084W	SHB17	P36136	271 aa	Known RBP	5.16	□□□□□ -1.58
SUB2	YDL084W	PRE5	P40302	234 aa	Known RBP	5.16	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 10.1 ms