RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 STYK1Q6J9G0 422 aa14.73□□□□□ -0.05
PHGDH-233ENST00000642021 C9orf72Q96LT7 481 aa14.73□□□□□ -0.05
PHGDH-233ENST00000642021 ZNF341Q9BYN7 854 aa14.73□□□□□ -0.05
PHGDH-233ENST00000642021 NSRP1Q9H0G5 558 aaKnown RBP14.73□□□□□ -0.05
PHGDH-233ENST00000642021 QTRT2Q9H974 415 aaKnown RBP14.73□□□□□ -0.05
PHGDH-233ENST00000642021 KMT5AQ9NQR1 393 aa14.73□□□□□ -0.05
PHGDH-233ENST00000642021 TBC1D22BQ9NU19 505 aa14.73□□□□□ -0.05
PHGDH-233ENST00000642021 ANAPC5Q9UJX4 755 aa14.73□□□□□ -0.05
PHGDH-233ENST00000642021 TAS2R40P59535 323 aa14.73□□□□□ -0.05
PHGDH-233ENST00000642021 KLF1Q13351 362 aaPredicted RBP14.73□□□□□ -0.05
PHGDH-233ENST00000642021 NEDD9Q14511 834 aa14.73□□□□□ -0.05
PHGDH-233ENST00000642021 PGM5Q15124 567 aa14.73□□□□□ -0.05
PHGDH-233ENST00000642021 ZKSCAN8Q15776 578 aaPredicted RBP14.73□□□□□ -0.05
PHGDH-233ENST00000642021 GALNTL6Q49A17 601 aa14.73□□□□□ -0.05
PHGDH-233ENST00000642021 ACCSLQ4AC99 568 aa14.73□□□□□ -0.05
PHGDH-233ENST00000642021 TMEM63BQ5T3F8 832 aa14.73□□□□□ -0.05
PHGDH-233ENST00000642021 TMC2Q8TDI7 906 aa14.73□□□□□ -0.05
PHGDH-233ENST00000642021 CKAP2Q8WWK9 683 aa14.73□□□□□ -0.05
PHGDH-233ENST00000642021 FAM213AQ9BRX8 229 aa14.73□□□□□ -0.05
PHGDH-233ENST00000642021 PLVAPQ9BX97 442 aa14.73□□□□□ -0.05
PHGDH-233ENST00000642021 PNMA3Q9UL41 463 aa14.73□□□□□ -0.05
PHGDH-233ENST00000642021 EXOC7Q9UPT5 735 aa14.73□□□□□ -0.05
PHGDH-233ENST00000642021 NAALADL1Q9UQQ1 740 aa14.73□□□□□ -0.05
PHGDH-233ENST00000642021 ZNFX1Q9P2E3 1918 aaKnown RBP14.73□□□□□ -0.05
PHGDH-233ENST00000642021 HGSO14964 777 aaPredicted RBP14.73□□□□□ -0.05
PHGDH-233ENST00000642021 DMP1Q13316 513 aaPredicted RBP14.73□□□□□ -0.05
PHGDH-233ENST00000642021 SPOPLQ6IQ16 392 aa14.73□□□□□ -0.05
PHGDH-233ENST00000642021 CGB2Q6NT52 195 aa14.73□□□□□ -0.05
PHGDH-233ENST00000642021 ATL2Q8NHH9 583 aa14.73□□□□□ -0.05
PHGDH-233ENST00000642021 ZNF862O60290 1169 aa14.72□□□□□ -0.05
PHGDH-233ENST00000642021 GJB6O95452 261 aa14.72□□□□□ -0.05
PHGDH-233ENST00000642021 ATF2P15336 505 aa14.72□□□□□ -0.05
PHGDH-233ENST00000642021 FITM2Q8N6M3 262 aa14.72□□□□□ -0.05
PHGDH-233ENST00000642021 TRAIPQ9BWF2 469 aa14.72□□□□□ -0.05
PHGDH-233ENST00000642021 L3MBTL1Q9Y468 752 aa14.72□□□□□ -0.05
PHGDH-233ENST00000642021 UMODL1Q5DID0 1318 aa14.72□□□□□ -0.05
PHGDH-233ENST00000642021 C21orf2O43822 256 aa14.72□□□□□ -0.05
PHGDH-233ENST00000642021 FDX1P10109 184 aa14.72□□□□□ -0.05
PHGDH-233ENST00000642021 DSG3P32926 999 aa14.72□□□□□ -0.05
PHGDH-233ENST00000642021 GCNT1Q02742 428 aa14.72□□□□□ -0.05
PHGDH-233ENST00000642021 MGAT5Q09328 741 aa14.72□□□□□ -0.05
PHGDH-233ENST00000642021 SPDYE2Q495Y8 402 aa14.72□□□□□ -0.05
PHGDH-233ENST00000642021 RSBN1LQ6PCB5 846 aaPredicted RBP14.72□□□□□ -0.05
PHGDH-233ENST00000642021 TAS1R3Q7RTX0 852 aa14.72□□□□□ -0.05
PHGDH-233ENST00000642021 SRRM1Q8IYB3 904 aaKnown RBP14.72□□□□□ -0.05
PHGDH-233ENST00000642021 KIF2BQ8N4N8 673 aa14.72□□□□□ -0.05
PHGDH-233ENST00000642021 RMDN2Q96LZ7 410 aa14.72□□□□□ -0.05
PHGDH-233ENST00000642021 NTPCRQ9BSD7 190 aaKnown RBP14.72□□□□□ -0.05
PHGDH-233ENST00000642021 TIPINQ9BVW5 301 aa14.72□□□□□ -0.05
PHGDH-233ENST00000642021 ECT2Q9H8V3 914 aa14.72□□□□□ -0.05
PHGDH-233ENST00000642021 TESPA1A2RU30 521 aaPredicted RBP14.71□□□□□ -0.05
PHGDH-233ENST00000642021 GAS8O95995 478 aa14.71□□□□□ -0.05
PHGDH-233ENST00000642021 PASD1Q8IV76 773 aa14.71□□□□□ -0.05
PHGDH-233ENST00000642021 GLIS1Q8NBF1 620 aa14.71□□□□□ -0.05
PHGDH-233ENST00000642021 GMLQ99445 158 aa14.71□□□□□ -0.05
PHGDH-233ENST00000642021 AVENQ9NQS1 362 aaPredicted RBP14.71□□□□□ -0.05
PHGDH-233ENST00000642021 ANKEF1Q9NU02 776 aa14.71□□□□□ -0.05
PHGDH-233ENST00000642021 TRIM33Q9UPN9 1127 aa14.71□□□□□ -0.05
PHGDH-233ENST00000642021 WDR64B1ANS9 1081 aa14.71□□□□□ -0.06
PHGDH-233ENST00000642021 HNRNPDLO14979 420 aaKnown RBP14.71□□□□□ -0.06
PHGDH-233ENST00000642021 SORBS3O60504 671 aa14.71□□□□□ -0.06
PHGDH-233ENST00000642021 BNIP1Q12981 228 aa14.71□□□□□ -0.06
PHGDH-233ENST00000642021 ZNF268Q14587 947 aaPredicted RBP14.71□□□□□ -0.06
PHGDH-233ENST00000642021 ATP13A4Q4VNC1 1196 aa14.71□□□□□ -0.06
PHGDH-233ENST00000642021 C15orf39Q6ZRI6 1047 aa14.71□□□□□ -0.06
PHGDH-233ENST00000642021 MCF2L2Q86YR7 1114 aa14.71□□□□□ -0.06
PHGDH-233ENST00000642021 GPD1LQ8N335 351 aa14.71□□□□□ -0.06
PHGDH-233ENST00000642021 FAM212AQ96EL1 285 aa14.71□□□□□ -0.06
PHGDH-233ENST00000642021 CEP170P1Q96L14 293 aa14.71□□□□□ -0.06
PHGDH-233ENST00000642021 RMDN3Q96TC7 470 aa14.71□□□□□ -0.06
PHGDH-233ENST00000642021 PDCD2LQ9BRP1 358 aa14.71□□□□□ -0.06
PHGDH-233ENST00000642021 C11orf70Q9BRQ4 267 aa14.71□□□□□ -0.06
PHGDH-233ENST00000642021 PRKAG3Q9UGI9 489 aa14.71□□□□□ -0.06
PHGDH-233ENST00000642021 IGF2BP3O00425 579 aaKnown RBP eCLIP14.7□□□□□ -0.06
PHGDH-233ENST00000642021 TCEA3O75764 348 aa14.7□□□□□ -0.06
PHGDH-233ENST00000642021 SUN1O94901 812 aa14.7□□□□□ -0.06
PHGDH-233ENST00000642021 CYP1A1P04798 512 aaPredicted RBP14.7□□□□□ -0.06
PHGDH-233ENST00000642021 NQO1P15559 274 aaKnown RBP14.7□□□□□ -0.06
PHGDH-233ENST00000642021 CD58P19256 250 aa14.7□□□□□ -0.06
PHGDH-233ENST00000642021 FOXN2P32314 431 aa14.7□□□□□ -0.06
PHGDH-233ENST00000642021 GJC1P36383 396 aa14.7□□□□□ -0.06
PHGDH-233ENST00000642021 SLC1A1P43005 524 aa14.7□□□□□ -0.06
PHGDH-233ENST00000642021 ALDH5A1P51649 535 aaPredicted RBP14.7□□□□□ -0.06
PHGDH-233ENST00000642021 SCARA3Q6AZY7 606 aa14.7□□□□□ -0.06
PHGDH-233ENST00000642021 SYDE1Q6ZW31 735 aaPredicted RBP14.7□□□□□ -0.06
PHGDH-233ENST00000642021 MON1BQ7L1V2 547 aa14.7□□□□□ -0.06
PHGDH-233ENST00000642021 SPATA21Q7Z572 469 aa14.7□□□□□ -0.06
PHGDH-233ENST00000642021 ANKLE1Q8NAG6 615 aa14.7□□□□□ -0.06
PHGDH-233ENST00000642021 GIMAP7Q8NHV1 300 aa14.7□□□□□ -0.06
PHGDH-233ENST00000642021 STAMBPL1Q96FJ0 436 aa14.7□□□□□ -0.06
PHGDH-233ENST00000642021 TGS1Q96RS0 853 aaKnown RBP14.7□□□□□ -0.06
PHGDH-233ENST00000642021 PCDHB2Q9Y5E7 798 aa14.7□□□□□ -0.06
PHGDH-233ENST00000642021 A8MUI8 341 aa14.7□□□□□ -0.06
PHGDH-233ENST00000642021 TBC1D12O60347 775 aa14.7□□□□□ -0.06
PHGDH-233ENST00000642021 PROSCO94903 275 aa14.7□□□□□ -0.06
PHGDH-233ENST00000642021 SLC8A1P32418 973 aa14.7□□□□□ -0.06
PHGDH-233ENST00000642021 GTF2H1P32780 548 aa14.7□□□□□ -0.06
PHGDH-233ENST00000642021 NSFP46459 744 aaKnown RBP14.7□□□□□ -0.06
PHGDH-233ENST00000642021 GHRHRQ02643 423 aa14.7□□□□□ -0.06
PHGDH-233ENST00000642021 IZUMO3Q5VZ72 239 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms