RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 TUBE1Q9UJT0 475 aa4.03□□□□□ -1.76
CCDC7-213ENST00000639290 CCPG1Q9ULG6 757 aa4.03□□□□□ -1.76
CCDC7-213ENST00000639290 PCDHA2Q9Y5H9 948 aa4.03□□□□□ -1.76
CCDC7-213ENST00000639290 MN1Q10571 1320 aaPredicted RBP4.03□□□□□ -1.76
CCDC7-213ENST00000639290 SMIM35A0A1B0GVV1 85 aa4.03□□□□□ -1.76
CCDC7-213ENST00000639290 TGM5O43548 720 aa4.03□□□□□ -1.76
CCDC7-213ENST00000639290 AP1G2O75843 785 aa4.03□□□□□ -1.76
CCDC7-213ENST00000639290 LDLRP01130 860 aa4.03□□□□□ -1.76
CCDC7-213ENST00000639290 VAMP1P23763 118 aa4.03□□□□□ -1.76
CCDC7-213ENST00000639290 VARSP26640 1264 aaKnown RBP4.03□□□□□ -1.76
CCDC7-213ENST00000639290 PXNP49023 591 aaPredicted RBP4.03□□□□□ -1.76
CCDC7-213ENST00000639290 SF3A1Q15459 793 aaKnown RBP4.03□□□□□ -1.76
CCDC7-213ENST00000639290 TBR1Q16650 682 aa4.03□□□□□ -1.76
CCDC7-213ENST00000639290 WDR45BQ5MNZ6 344 aa4.03□□□□□ -1.76
CCDC7-213ENST00000639290 SYCP2LQ5T4T6 812 aa4.03□□□□□ -1.76
CCDC7-213ENST00000639290 C16orf86Q6ZW13 317 aa4.03□□□□□ -1.76
CCDC7-213ENST00000639290 ZNF598Q86UK7 904 aaKnown RBP4.03□□□□□ -1.76
CCDC7-213ENST00000639290 ECHDC2Q86YB7 292 aa4.03□□□□□ -1.76
CCDC7-213ENST00000639290 HPS3Q969F9 1004 aa4.03□□□□□ -1.76
CCDC7-213ENST00000639290 SUCLG2Q96I99 432 aa4.03□□□□□ -1.76
CCDC7-213ENST00000639290 ZNF512BQ96KM6 892 aaPredicted RBP4.03□□□□□ -1.76
CCDC7-213ENST00000639290 VN1R3Q9BXE9 311 aa4.03□□□□□ -1.76
CCDC7-213ENST00000639290 SPRTNQ9H040 489 aaPredicted RBP4.03□□□□□ -1.76
CCDC7-213ENST00000639290 RANBP17Q9H2T7 1088 aaKnown RBP4.03□□□□□ -1.76
CCDC7-213ENST00000639290 TFIP11Q9UBB9 837 aaKnown RBP4.03□□□□□ -1.76
CCDC7-213ENST00000639290 MRVI1Q9Y6F6 885 aa4.03□□□□□ -1.76
CCDC7-213ENST00000639290 A0A1B0GTW7 788 aa4.02□□□□□ -1.77
CCDC7-213ENST00000639290 A1L4Q6 167 aa4.02□□□□□ -1.77
CCDC7-213ENST00000639290 WDR27A2RRH5 827 aa4.02□□□□□ -1.77
CCDC7-213ENST00000639290 RCCD1A6NED2 376 aa4.02□□□□□ -1.77
CCDC7-213ENST00000639290 ACTN4O43707 911 aaKnown RBP4.02□□□□□ -1.77
CCDC7-213ENST00000639290 MGEA5O60502 916 aa4.02□□□□□ -1.77
CCDC7-213ENST00000639290 RPS6KA5O75582 802 aa4.02□□□□□ -1.77
CCDC7-213ENST00000639290 GLDCP23378 1020 aa4.02□□□□□ -1.77
CCDC7-213ENST00000639290 SREBF1P36956 1147 aa4.02□□□□□ -1.77
CCDC7-213ENST00000639290 RFX5P48382 616 aaPredicted RBP4.02□□□□□ -1.77
CCDC7-213ENST00000639290 GRIK2Q13002 908 aa4.02□□□□□ -1.77
CCDC7-213ENST00000639290 KCNAB2Q13303 367 aa4.02□□□□□ -1.77
CCDC7-213ENST00000639290 ADAM9Q13443 819 aa4.02□□□□□ -1.77
CCDC7-213ENST00000639290 PON2Q15165 354 aa4.02□□□□□ -1.77
CCDC7-213ENST00000639290 HES3Q5TGS1 186 aa4.02□□□□□ -1.77
CCDC7-213ENST00000639290 RSRC2Q7L4I2 434 aaKnown RBP4.02□□□□□ -1.77
CCDC7-213ENST00000639290 METTL3Q86U44 580 aaKnown RBP4.02□□□□□ -1.77
CCDC7-213ENST00000639290 BIVMQ86UB2 503 aa4.02□□□□□ -1.77
CCDC7-213ENST00000639290 AMOTL1Q8IY63 956 aa4.02□□□□□ -1.77
CCDC7-213ENST00000639290 ZSCAN1Q8NBB4 408 aa4.02□□□□□ -1.77
CCDC7-213ENST00000639290 GIPC2Q8TF65 315 aa4.02□□□□□ -1.77
CCDC7-213ENST00000639290 FOXJ1Q92949 421 aa4.02□□□□□ -1.77
CCDC7-213ENST00000639290 PDCD2LQ9BRP1 358 aa4.02□□□□□ -1.77
CCDC7-213ENST00000639290 ALG2Q9H553 416 aa4.02□□□□□ -1.77
CCDC7-213ENST00000639290 POLR1BQ9H9Y6 1135 aa4.02□□□□□ -1.77
CCDC7-213ENST00000639290 KANSL3Q9P2N6 904 aa4.02□□□□□ -1.77
CCDC7-213ENST00000639290 YKT6O15498 198 aa4.02□□□□□ -1.77
CCDC7-213ENST00000639290 NR1I2O75469 434 aa4.02□□□□□ -1.77
CCDC7-213ENST00000639290 PRF1P14222 555 aa4.02□□□□□ -1.77
CCDC7-213ENST00000639290 KLRB1Q12918 225 aa4.02□□□□□ -1.77
CCDC7-213ENST00000639290 MAP7D1Q3KQU3 841 aa4.02□□□□□ -1.77
CCDC7-213ENST00000639290 PLEKHG6Q3KR16 790 aa4.02□□□□□ -1.77
CCDC7-213ENST00000639290 CLLU1OSQ5K130 101 aa4.02□□□□□ -1.77
CCDC7-213ENST00000639290 PRSS36Q5K4E3 855 aa4.02□□□□□ -1.77
CCDC7-213ENST00000639290 CC2D1BQ5T0F9 858 aaKnown RBP4.02□□□□□ -1.77
CCDC7-213ENST00000639290 FSTL4Q6MZW2 842 aa4.02□□□□□ -1.77
CCDC7-213ENST00000639290 CLEC14AQ86T13 490 aa4.02□□□□□ -1.77
CCDC7-213ENST00000639290 VCPIP1Q96JH7 1222 aa4.02□□□□□ -1.77
CCDC7-213ENST00000639290 TBC1D32Q96NH3 1257 aa4.02□□□□□ -1.77
CCDC7-213ENST00000639290 PRDM16Q9HAZ2 1276 aa4.02□□□□□ -1.77
CCDC7-213ENST00000639290 ASCL3Q9NQ33 180 aa4.02□□□□□ -1.77
CCDC7-213ENST00000639290 CHST7Q9NS84 486 aa4.02□□□□□ -1.77
CCDC7-213ENST00000639290 ACSL6Q9UKU0 697 aa4.02□□□□□ -1.77
CCDC7-213ENST00000639290 PLAAQ9Y263 795 aa4.02□□□□□ -1.77
CCDC7-213ENST00000639290 PLIN4Q96Q06 1357 aa4.02□□□□□ -1.77
CCDC7-213ENST00000639290 FAM171A2A8MVW0 826 aa4.01□□□□□ -1.77
CCDC7-213ENST00000639290 ENC1O14682 589 aa4.01□□□□□ -1.77
CCDC7-213ENST00000639290 JAK2O60674 1132 aa4.01□□□□□ -1.77
CCDC7-213ENST00000639290 SHOX2O60902 331 aaPredicted RBP4.01□□□□□ -1.77
CCDC7-213ENST00000639290 NADKO95544 446 aaPredicted RBP4.01□□□□□ -1.77
CCDC7-213ENST00000639290 ITPKAP23677 461 aa4.01□□□□□ -1.77
CCDC7-213ENST00000639290 KRT76Q01546 638 aa4.01□□□□□ -1.77
CCDC7-213ENST00000639290 GRIN1Q05586 938 aa4.01□□□□□ -1.77
CCDC7-213ENST00000639290 PPFIA1Q13136 1202 aa4.01□□□□□ -1.77
CCDC7-213ENST00000639290 ELOAQ14241 798 aaKnown RBP4.01□□□□□ -1.77
CCDC7-213ENST00000639290 GRM2Q14416 872 aa4.01□□□□□ -1.77
CCDC7-213ENST00000639290 ITPRIPL2Q3MIP1 535 aa4.01□□□□□ -1.77
CCDC7-213ENST00000639290 FAM78AQ5JUQ0 283 aa4.01□□□□□ -1.77
CCDC7-213ENST00000639290 BLOC1S3Q6QNY0 202 aa4.01□□□□□ -1.77
CCDC7-213ENST00000639290 NOSTRINQ8IVI9 506 aa4.01□□□□□ -1.77
CCDC7-213ENST00000639290 DNAJB3Q8WWF6 145 aa4.01□□□□□ -1.77
CCDC7-213ENST00000639290 ERLEC1Q96DZ1 483 aa4.01□□□□□ -1.77
CCDC7-213ENST00000639290 FUCA2Q9BTY2 467 aa4.01□□□□□ -1.77
CCDC7-213ENST00000639290 OSGEPQ9NPF4 335 aa4.01□□□□□ -1.77
CCDC7-213ENST00000639290 MAP3K20Q9NYL2 800 aaKnown RBP4.01□□□□□ -1.77
CCDC7-213ENST00000639290 ADAMTS1Q9UHI8 967 aa4.01□□□□□ -1.77
CCDC7-213ENST00000639290 ZMYM5Q9UJ78 669 aa4.01□□□□□ -1.77
CCDC7-213ENST00000639290 MAFFQ9ULX9 164 aa4.01□□□□□ -1.77
CCDC7-213ENST00000639290 CLCA2Q9UQC9 943 aa4.01□□□□□ -1.77
CCDC7-213ENST00000639290 TELO2Q9Y4R8 837 aa4.01□□□□□ -1.77
CCDC7-213ENST00000639290 AKAP9Q99996 3911 aa4.01□□□□□ -1.77
CCDC7-213ENST00000639290 MYH4Q9Y623 1939 aa4.01□□□□□ -1.77
CCDC7-213ENST00000639290 NUP210Q8TEM1 1887 aaPredicted RBP4.01□□□□□ -1.77
CCDC7-213ENST00000639290 PTPRDP23468 1912 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms