RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-222ENST00000638959 PCDHB6Q9Y5E3 794 aa1.64□□□□□ -2.15
LMBR1-222ENST00000638959 CXorf49A8MYA2 514 aaPredicted RBP1.63□□□□□ -2.15
LMBR1-222ENST00000638959 SCAMP3O14828 347 aaKnown RBP1.63□□□□□ -2.15
LMBR1-222ENST00000638959 SLC28A2O43868 658 aa1.63□□□□□ -2.15
LMBR1-222ENST00000638959 PRAMEF4O60810 478 aa1.63□□□□□ -2.15
LMBR1-222ENST00000638959 BCAR3O75815 825 aa1.63□□□□□ -2.15
LMBR1-222ENST00000638959 PRPF6O94906 941 aaKnown RBP1.63□□□□□ -2.15
LMBR1-222ENST00000638959 GCSHP23434 173 aa1.63□□□□□ -2.15
LMBR1-222ENST00000638959 CXCR3P49682 368 aa1.63□□□□□ -2.15
LMBR1-222ENST00000638959 FLT3LGP49771 235 aa1.63□□□□□ -2.15
LMBR1-222ENST00000638959 CCT8P50990 548 aa1.63□□□□□ -2.15
LMBR1-222ENST00000638959 MGAT5Q09328 741 aa1.63□□□□□ -2.15
LMBR1-222ENST00000638959 MFSD14BQ5SR56 506 aa1.63□□□□□ -2.15
LMBR1-222ENST00000638959 PRAMEF14Q5SWL7 426 aa1.63□□□□□ -2.15
LMBR1-222ENST00000638959 FOXB2Q5VYV0 432 aa1.63□□□□□ -2.15
LMBR1-222ENST00000638959 CEP85Q6P2H3 762 aa1.63□□□□□ -2.15
LMBR1-222ENST00000638959 ZNF549Q6P9A3 640 aa1.63□□□□□ -2.15
LMBR1-222ENST00000638959 LMBR1LQ6UX01 489 aa1.63□□□□□ -2.15
LMBR1-222ENST00000638959 CATSPERGQ6ZRH7 1159 aa1.63□□□□□ -2.15
LMBR1-222ENST00000638959 KRTAP5-5Q701N2 237 aaPredicted RBP1.63□□□□□ -2.15
LMBR1-222ENST00000638959 NME9Q86XW9 330 aa1.63□□□□□ -2.15
LMBR1-222ENST00000638959 MCF2L2Q86YR7 1114 aa1.63□□□□□ -2.15
LMBR1-222ENST00000638959 PHYKPLQ8IUZ5 450 aa1.63□□□□□ -2.15
LMBR1-222ENST00000638959 CDYL2Q8N8U2 506 aa1.63□□□□□ -2.15
LMBR1-222ENST00000638959 ZBTB38Q8NAP3 1195 aaPredicted RBP1.63□□□□□ -2.15
LMBR1-222ENST00000638959 DBF4BQ8NFT6 615 aa1.63□□□□□ -2.15
LMBR1-222ENST00000638959 C16orf52Q8NHV5 167 aa1.63□□□□□ -2.15
LMBR1-222ENST00000638959 SLC30A5Q8TAD4 765 aa1.63□□□□□ -2.15
LMBR1-222ENST00000638959 TMEM125Q96AQ2 219 aa1.63□□□□□ -2.15
LMBR1-222ENST00000638959 PGBD1Q96JS3 809 aa1.63□□□□□ -2.15
LMBR1-222ENST00000638959 C5orf34Q96MH7 638 aa1.63□□□□□ -2.15
LMBR1-222ENST00000638959 BCL2L13Q9BXK5 485 aa1.63□□□□□ -2.15
LMBR1-222ENST00000638959 MYO1FO00160 1098 aa1.62□□□□□ -2.15
LMBR1-222ENST00000638959 SPRY2O43597 315 aa1.62□□□□□ -2.15
LMBR1-222ENST00000638959 DIAPH1O60610 1272 aaKnown RBP1.62□□□□□ -2.15
LMBR1-222ENST00000638959 JTBO76095 146 aa1.62□□□□□ -2.15
LMBR1-222ENST00000638959 SEC24DO94855 1032 aaPredicted RBP1.62□□□□□ -2.15
LMBR1-222ENST00000638959 C6orf222P0C671 652 aaPredicted RBP1.62□□□□□ -2.15
LMBR1-222ENST00000638959 PRF1P14222 555 aa1.62□□□□□ -2.15
LMBR1-222ENST00000638959 ERCC3P19447 782 aa1.62□□□□□ -2.15
LMBR1-222ENST00000638959 XPAP23025 273 aaPredicted RBP1.62□□□□□ -2.15
LMBR1-222ENST00000638959 SUMO1P63165 101 aaKnown RBP1.62□□□□□ -2.15
LMBR1-222ENST00000638959 ZXDBP98169 803 aa1.62□□□□□ -2.15
LMBR1-222ENST00000638959 EPHA7Q15375 998 aa1.62□□□□□ -2.15
LMBR1-222ENST00000638959 DRC7Q8IY82 874 aa1.62□□□□□ -2.15
LMBR1-222ENST00000638959 LRRC47Q8N1G4 583 aaKnown RBP1.62□□□□□ -2.15
LMBR1-222ENST00000638959 MYCBPAPQ8TBZ2 947 aa1.62□□□□□ -2.15
LMBR1-222ENST00000638959 DDX17Q92841 729 aaKnown RBP1.62□□□□□ -2.15
LMBR1-222ENST00000638959 WBP2Q969T9 261 aa1.62□□□□□ -2.15
LMBR1-222ENST00000638959 FAM84BQ96KN1 310 aaPredicted RBP1.62□□□□□ -2.15
LMBR1-222ENST00000638959 BACH2Q9BYV9 841 aa1.62□□□□□ -2.15
LMBR1-222ENST00000638959 POFUT1Q9H488 388 aa1.62□□□□□ -2.15
LMBR1-222ENST00000638959 INTS13Q9NVM9 706 aa1.62□□□□□ -2.15
LMBR1-222ENST00000638959 KLHL13Q9P2N7 655 aa1.62□□□□□ -2.15
LMBR1-222ENST00000638959 A0A1W2PR48 441 aa1.61□□□□□ -2.15
LMBR1-222ENST00000638959 DVL2O14641 736 aa1.61□□□□□ -2.15
LMBR1-222ENST00000638959 NRP2O60462 931 aa1.61□□□□□ -2.15
LMBR1-222ENST00000638959 SOCS5O75159 536 aa1.61□□□□□ -2.15
LMBR1-222ENST00000638959 TOMM40O96008 361 aa1.61□□□□□ -2.15
LMBR1-222ENST00000638959 CYP17A1P05093 508 aa1.61□□□□□ -2.15
LMBR1-222ENST00000638959 PSG1P11464 419 aa1.61□□□□□ -2.15
LMBR1-222ENST00000638959 RHCEP18577 417 aa1.61□□□□□ -2.15
LMBR1-222ENST00000638959 PTX3P26022 381 aaPredicted RBP1.61□□□□□ -2.15
LMBR1-222ENST00000638959 NRG3P56975 720 aa1.61□□□□□ -2.15
LMBR1-222ENST00000638959 KRTAP10-1P60331 282 aa1.61□□□□□ -2.15
LMBR1-222ENST00000638959 GABREP78334 506 aa1.61□□□□□ -2.15
LMBR1-222ENST00000638959 DAB2IPQ5VWQ8 1189 aa1.61□□□□□ -2.15
LMBR1-222ENST00000638959 CAPRIN2Q6IMN6 1127 aaKnown RBP1.61□□□□□ -2.15
LMBR1-222ENST00000638959 SLITRK1Q96PX8 696 aa1.61□□□□□ -2.15
LMBR1-222ENST00000638959 CDC6Q99741 560 aa1.61□□□□□ -2.15
LMBR1-222ENST00000638959 FDXACB1Q9BRP7 624 aaPredicted RBP1.61□□□□□ -2.15
LMBR1-222ENST00000638959 POT1Q9NUX5 634 aa1.61□□□□□ -2.15
LMBR1-222ENST00000638959 GPRC5DQ9NZD1 345 aa1.61□□□□□ -2.15
LMBR1-222ENST00000638959 PRKAG3Q9UGI9 489 aa1.61□□□□□ -2.15
LMBR1-222ENST00000638959 USP18Q9UMW8 372 aa1.61□□□□□ -2.15
LMBR1-222ENST00000638959 MYPNQ86TC9 1320 aa1.61□□□□□ -2.15
LMBR1-222ENST00000638959 WDR17Q8IZU2 1322 aa1.61□□□□□ -2.15
LMBR1-222ENST00000638959 ZBTB7CA1YPR0 619 aa1.6□□□□□ -2.15
LMBR1-222ENST00000638959 B4DGG1 531 aa1.6□□□□□ -2.15
LMBR1-222ENST00000638959 ADAMTS3O15072 1205 aa1.6□□□□□ -2.15
LMBR1-222ENST00000638959 PRSS23O95084 383 aa1.6□□□□□ -2.15
LMBR1-222ENST00000638959 SSBP05455 408 aaKnown RBP eCLIP1.6□□□□□ -2.15
LMBR1-222ENST00000638959 LTA4HP09960 611 aaKnown RBP1.6□□□□□ -2.15
LMBR1-222ENST00000638959 KRT2P35908 639 aa1.6□□□□□ -2.15
LMBR1-222ENST00000638959 TMEM177Q53S58 311 aa1.6□□□□□ -2.15
LMBR1-222ENST00000638959 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP1.6□□□□□ -2.15
LMBR1-222ENST00000638959 PIM3Q86V86 326 aa1.6□□□□□ -2.15
LMBR1-222ENST00000638959 PNLDC1Q8NA58 520 aaKnown RBP1.6□□□□□ -2.15
LMBR1-222ENST00000638959 COQ8BQ96D53 544 aa1.6□□□□□ -2.15
LMBR1-222ENST00000638959 REPS1Q96D71 796 aa1.6□□□□□ -2.15
LMBR1-222ENST00000638959 ZC3H10Q96K80 434 aaKnown RBP1.6□□□□□ -2.15
LMBR1-222ENST00000638959 SENP6Q9GZR1 1112 aaPredicted RBP1.6□□□□□ -2.15
LMBR1-222ENST00000638959 FAM234AQ9H0X4 552 aa1.6□□□□□ -2.15
LMBR1-222ENST00000638959 ST7Q9NRC1 585 aa1.6□□□□□ -2.15
LMBR1-222ENST00000638959 TTC3P53804 2025 aa1.6□□□□□ -2.15
LMBR1-222ENST00000638959 PNPLA7Q6ZV29 1317 aa1.6□□□□□ -2.15
LMBR1-222ENST00000638959 TRBV23-1A0A0A0MS06 115 aa1.59□□□□□ -2.15
LMBR1-222ENST00000638959 ST20-MTHFSA0A0A6YYL1 179 aa1.59□□□□□ -2.15
LMBR1-222ENST00000638959 ANTXRLA6NF34 631 aa1.59□□□□□ -2.15
LMBR1-222ENST00000638959 GASTP01350 101 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms