RNA–Protein interactions for RNA: ENST00000638443.1

ATM-226, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 2,146 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-226ENST00000638443 CDHR5Q9HBB8 845 aa10.64□□□□□ -0.71
ATM-226ENST00000638443 CHORDC1Q9UHD1 332 aaPredicted RBP10.64□□□□□ -0.71
ATM-226ENST00000638443 PMM2O15305 246 aa10.64□□□□□ -0.71
ATM-226ENST00000638443 CA12O43570 354 aa10.64□□□□□ -0.71
ATM-226ENST00000638443 FTCDO95954 541 aa10.64□□□□□ -0.71
ATM-226ENST00000638443 IGHA2P01877 340 aa10.64□□□□□ -0.71
ATM-226ENST00000638443 MYL3P08590 195 aa10.64□□□□□ -0.71
ATM-226ENST00000638443 ARF4P18085 180 aaPredicted RBP10.64□□□□□ -0.71
ATM-226ENST00000638443 CXCR5P32302 372 aa10.64□□□□□ -0.71
ATM-226ENST00000638443 PSMC4P43686 418 aa10.64□□□□□ -0.71
ATM-226ENST00000638443 TM4SF4P48230 202 aa10.64□□□□□ -0.71
ATM-226ENST00000638443 PRKCZQ05513 592 aa10.64□□□□□ -0.71
ATM-226ENST00000638443 NAB2Q15742 525 aa10.64□□□□□ -0.71
ATM-226ENST00000638443 NFRKBQ6P4R8 1299 aa10.64□□□□□ -0.71
ATM-226ENST00000638443 MPZL3Q6UWV2 235 aa10.64□□□□□ -0.71
ATM-226ENST00000638443 TRAPPC11Q7Z392 1133 aa10.64□□□□□ -0.71
ATM-226ENST00000638443 KIAA0319LQ8IZA0 1049 aa10.64□□□□□ -0.71
ATM-226ENST00000638443 MSL3Q8N5Y2 521 aaKnown RBP10.64□□□□□ -0.71
ATM-226ENST00000638443 FBXO22Q8NEZ5 403 aa10.64□□□□□ -0.71
ATM-226ENST00000638443 EPS8L1Q8TE68 723 aa10.64□□□□□ -0.71
ATM-226ENST00000638443 SOCS4Q8WXH5 440 aa10.64□□□□□ -0.71
ATM-226ENST00000638443 SHC3Q92529 594 aa10.64□□□□□ -0.71
ATM-226ENST00000638443 TMUB1Q9BVT8 246 aa10.64□□□□□ -0.71
ATM-226ENST00000638443 KIAA1586Q9HCI6 787 aa10.64□□□□□ -0.71
ATM-226ENST00000638443 SMARCAL1Q9NZC9 954 aa10.64□□□□□ -0.71
ATM-226ENST00000638443 EHD2Q9NZN4 543 aa10.64□□□□□ -0.71
ATM-226ENST00000638443 CDC23Q9UJX2 597 aa10.64□□□□□ -0.71
ATM-226ENST00000638443 CPSF3Q9UKF6 684 aaKnown RBP10.64□□□□□ -0.71
ATM-226ENST00000638443 BZW2Q9Y6E2 419 aaKnown RBP10.64□□□□□ -0.71
ATM-226ENST00000638443 MGAMO43451 1857 aa10.64□□□□□ -0.71
ATM-226ENST00000638443 COL1A2P08123 1366 aa10.63□□□□□ -0.71
ATM-226ENST00000638443 OGTO15294 1046 aa10.63□□□□□ -0.71
ATM-226ENST00000638443 PALMO75781 387 aa10.63□□□□□ -0.71
ATM-226ENST00000638443 LDHAP00338 332 aaKnown RBP10.63□□□□□ -0.71
ATM-226ENST00000638443 CST3P01034 146 aaPredicted RBP10.63□□□□□ -0.71
ATM-226ENST00000638443 MMEP08473 750 aa10.63□□□□□ -0.71
ATM-226ENST00000638443 SSTR3P32745 418 aaPredicted RBP10.63□□□□□ -0.71
ATM-226ENST00000638443 GTF2H1P32780 548 aa10.63□□□□□ -0.71
ATM-226ENST00000638443 PHKA2P46019 1235 aa10.63□□□□□ -0.71
ATM-226ENST00000638443 INHBEP58166 350 aa10.63□□□□□ -0.71
ATM-226ENST00000638443 TEX35Q5T0J7 233 aa10.63□□□□□ -0.71
ATM-226ENST00000638443 USP37Q86T82 979 aa10.63□□□□□ -0.71
ATM-226ENST00000638443 FAM71AQ8IYT1 594 aa10.63□□□□□ -0.71
ATM-226ENST00000638443 ARHGEF26Q96DR7 871 aa10.63□□□□□ -0.71
ATM-226ENST00000638443 PCDHB18PQ96TA0 734 aa10.63□□□□□ -0.71
ATM-226ENST00000638443 CXCL16Q9H2A7 254 aa10.63□□□□□ -0.71
ATM-226ENST00000638443 PDZD7Q9H5P4 517 aa10.63□□□□□ -0.71
ATM-226ENST00000638443 OSGEPQ9NPF4 335 aa10.63□□□□□ -0.71
ATM-226ENST00000638443 NOCTQ9UK39 431 aaKnown RBP10.63□□□□□ -0.71
ATM-226ENST00000638443 GRID2IPA4D2P6 1211 aa10.63□□□□□ -0.71
ATM-226ENST00000638443 MAGEB2O15479 319 aa10.63□□□□□ -0.71
ATM-226ENST00000638443 ATMINO43313 823 aaPredicted RBP10.63□□□□□ -0.71
ATM-226ENST00000638443 TACC1O75410 805 aa10.63□□□□□ -0.71
ATM-226ENST00000638443 KRT5P13647 590 aa10.63□□□□□ -0.71
ATM-226ENST00000638443 CHRNB2P17787 502 aa10.63□□□□□ -0.71
ATM-226ENST00000638443 FLT3LGP49771 235 aa10.63□□□□□ -0.71
ATM-226ENST00000638443 GALCP54803 685 aa10.63□□□□□ -0.71
ATM-226ENST00000638443 LACTBP83111 547 aaPredicted RBP10.63□□□□□ -0.71
ATM-226ENST00000638443 TRIM58Q8NG06 486 aa10.63□□□□□ -0.71
ATM-226ENST00000638443 COG1Q8WTW3 980 aa10.63□□□□□ -0.71
ATM-226ENST00000638443 MAP7D2Q96T17 732 aa10.63□□□□□ -0.71
ATM-226ENST00000638443 OSMRQ99650 979 aa10.63□□□□□ -0.71
ATM-226ENST00000638443 AGPAT1Q99943 283 aa10.63□□□□□ -0.71
ATM-226ENST00000638443 C1orf112Q9NSG2 853 aa10.63□□□□□ -0.71
ATM-226ENST00000638443 NUB1Q9Y5A7 615 aa10.63□□□□□ -0.71
ATM-226ENST00000638443 CFAP69A5D8W1 941 aa10.62□□□□□ -0.71
ATM-226ENST00000638443 PDE2AO00408 941 aaPredicted RBP10.62□□□□□ -0.71
ATM-226ENST00000638443 KIAA0391O15091 583 aaKnown RBP10.62□□□□□ -0.71
ATM-226ENST00000638443 TREHO43280 583 aa10.62□□□□□ -0.71
ATM-226ENST00000638443 TSPAN1O60635 241 aa10.62□□□□□ -0.71
ATM-226ENST00000638443 PGK1P00558 417 aa10.62□□□□□ -0.71
ATM-226ENST00000638443 NFICP08651 508 aa10.62□□□□□ -0.71
ATM-226ENST00000638443 C6orf222P0C671 652 aaPredicted RBP10.62□□□□□ -0.71
ATM-226ENST00000638443 MFAP3P55082 362 aa10.62□□□□□ -0.71
ATM-226ENST00000638443 NOP14P78316 857 aaKnown RBP10.62□□□□□ -0.71
ATM-226ENST00000638443 TFAMQ00059 246 aaKnown RBP10.62□□□□□ -0.71
ATM-226ENST00000638443 TMEM164Q5U3C3 297 aa10.62□□□□□ -0.71
ATM-226ENST00000638443 TMEM40Q8WWA1 233 aa10.62□□□□□ -0.71
ATM-226ENST00000638443 ANKRD7Q92527 254 aa10.62□□□□□ -0.71
ATM-226ENST00000638443 NOX5Q96PH1 765 aa10.62□□□□□ -0.71
ATM-226ENST00000638443 THAP2Q9H0W7 228 aa10.62□□□□□ -0.71
ATM-226ENST00000638443 RNF19AQ9NV58 838 aa10.62□□□□□ -0.71
ATM-226ENST00000638443 TNFSF13BQ9Y275 285 aa10.62□□□□□ -0.71
ATM-226ENST00000638443 MRPL42Q9Y6G3 142 aaKnown RBP10.62□□□□□ -0.71
ATM-226ENST00000638443 ASAP2O43150 1006 aa10.61□□□□□ -0.71
ATM-226ENST00000638443 CFHP08603 1231 aa10.61□□□□□ -0.71
ATM-226ENST00000638443 CYBAP13498 195 aa10.61□□□□□ -0.71
ATM-226ENST00000638443 ELNP15502 786 aa10.61□□□□□ -0.71
ATM-226ENST00000638443 CYP11B1P15538 503 aa10.61□□□□□ -0.71
ATM-226ENST00000638443 ZSCAN20P17040 1043 aaPredicted RBP10.61□□□□□ -0.71
ATM-226ENST00000638443 TNFAIP3P21580 790 aa10.61□□□□□ -0.71
ATM-226ENST00000638443 SCP2P22307 547 aa10.61□□□□□ -0.71
ATM-226ENST00000638443 TMOD1P28289 359 aa10.61□□□□□ -0.71
ATM-226ENST00000638443 SCNN1AP37088 669 aa10.61□□□□□ -0.71
ATM-226ENST00000638443 GUCY2FP51841 1108 aa10.61□□□□□ -0.71
ATM-226ENST00000638443 MYL6P60660 151 aa10.61□□□□□ -0.71
ATM-226ENST00000638443 FMO1Q01740 532 aa10.61□□□□□ -0.71
ATM-226ENST00000638443 NCOA4Q13772 614 aa10.61□□□□□ -0.71
ATM-226ENST00000638443 FSCN1Q16658 493 aaKnown RBP10.61□□□□□ -0.71
ATM-226ENST00000638443 PAPD7Q5XG87 772 aaKnown RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms