RNA–Protein interactions for RNA: ENST00000637981.1

CACNA1A-256, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 1,346 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-256	ENST00000637981	SPATA6	Q9NWH7	488 aa	Predicted RBP	10.38	□□□□□ -0.75
CACNA1A-256	ENST00000637981	NCDN	Q9UBB6	729 aa		10.38	□□□□□ -0.75
CACNA1A-256	ENST00000637981	HOOK1	Q9UJC3	728 aa	Known RBP	10.38	□□□□□ -0.75
CACNA1A-256	ENST00000637981	GIT1	Q9Y2X7	761 aa		10.38	□□□□□ -0.75
CACNA1A-256	ENST00000637981	TDRD15	B5MCY1	1934 aa	Known RBP	10.38	□□□□□ -0.75
CACNA1A-256	ENST00000637981	CACNA1A	O00555	2505 aa		10.38	□□□□□ -0.75
CACNA1A-256	ENST00000637981		A0A1B0GVL5	298 aa		10.37	□□□□□ -0.75
CACNA1A-256	ENST00000637981	INO80B-WBP1	J3KQ70	363 aa		10.37	□□□□□ -0.75
CACNA1A-256	ENST00000637981	SPTLC1	O15269	473 aa		10.37	□□□□□ -0.75
CACNA1A-256	ENST00000637981	TADA2A	O75478	443 aa		10.37	□□□□□ -0.75
CACNA1A-256	ENST00000637981	KRT18	P05783	430 aa	Known RBP	10.37	□□□□□ -0.75
CACNA1A-256	ENST00000637981	PFKFB1	P16118	471 aa		10.37	□□□□□ -0.75
CACNA1A-256	ENST00000637981	AKAP5	P24588	427 aa		10.37	□□□□□ -0.75
CACNA1A-256	ENST00000637981	PTEN	P60484	403 aa		10.37	□□□□□ -0.75
CACNA1A-256	ENST00000637981	TFDP1	Q14186	410 aa		10.37	□□□□□ -0.75
CACNA1A-256	ENST00000637981	UBXN2B	Q14CS0	331 aa		10.37	□□□□□ -0.75
CACNA1A-256	ENST00000637981	PPP2R5A	Q15172	486 aa		10.37	□□□□□ -0.75
CACNA1A-256	ENST00000637981	MLF2	Q15773	248 aa	Predicted RBP	10.37	□□□□□ -0.75
CACNA1A-256	ENST00000637981	ZNF528	Q3MIS6	628 aa		10.37	□□□□□ -0.75
CACNA1A-256	ENST00000637981	PRSS55	Q6UWB4	352 aa	Predicted RBP	10.37	□□□□□ -0.75
CACNA1A-256	ENST00000637981	MTSS1L	Q765P7	747 aa		10.37	□□□□□ -0.75
CACNA1A-256	ENST00000637981	GSTCD	Q8NEC7	633 aa		10.37	□□□□□ -0.75
CACNA1A-256	ENST00000637981	DHX58	Q96C10	678 aa		10.37	□□□□□ -0.75
CACNA1A-256	ENST00000637981	BORCS6	Q96GS4	357 aa		10.37	□□□□□ -0.75
CACNA1A-256	ENST00000637981	IFT74	Q96LB3	600 aa		10.37	□□□□□ -0.75
CACNA1A-256	ENST00000637981	DRC1	Q96MC2	740 aa		10.37	□□□□□ -0.75
CACNA1A-256	ENST00000637981	CNTNAP3B	Q96NU0	1288 aa		10.37	□□□□□ -0.75
CACNA1A-256	ENST00000637981	DCBLD2	Q96PD2	775 aa		10.37	□□□□□ -0.75
CACNA1A-256	ENST00000637981	PANK2	Q9BZ23	570 aa		10.37	□□□□□ -0.75
CACNA1A-256	ENST00000637981	CNTNAP3	Q9BZ76	1288 aa		10.37	□□□□□ -0.75
CACNA1A-256	ENST00000637981	TNMD	Q9H2S6	317 aa		10.37	□□□□□ -0.75
CACNA1A-256	ENST00000637981	C17orf75	Q9HAS0	396 aa		10.37	□□□□□ -0.75
CACNA1A-256	ENST00000637981	BLOC1S4	Q9NUP1	217 aa		10.37	□□□□□ -0.75
CACNA1A-256	ENST00000637981	FBXO4	Q9UKT5	387 aa		10.37	□□□□□ -0.75
CACNA1A-256	ENST00000637981	CDH7	Q9ULB5	785 aa		10.37	□□□□□ -0.75
CACNA1A-256	ENST00000637981	MTF2	Q9Y483	593 aa	Predicted RBP	10.37	□□□□□ -0.75
CACNA1A-256	ENST00000637981	COL4A3	Q01955	1670 aa		10.37	□□□□□ -0.75
CACNA1A-256	ENST00000637981	EP300	Q09472	2414 aa	Predicted RBP	10.37	□□□□□ -0.75
CACNA1A-256	ENST00000637981	MIA3	Q5JRA6	1907 aa		10.37	□□□□□ -0.75
CACNA1A-256	ENST00000637981	FAM170B	A6NMN3	283 aa		10.36	□□□□□ -0.75
CACNA1A-256	ENST00000637981	PRPF40A	O75400	957 aa	Known RBP	10.36	□□□□□ -0.75
CACNA1A-256	ENST00000637981	MYL1	P05976	194 aa		10.36	□□□□□ -0.75
CACNA1A-256	ENST00000637981	HNRNPA1	P09651	372 aa	Known RBP eCLIP	10.36	□□□□□ -0.75
CACNA1A-256	ENST00000637981	SLFN14	P0C7P3	912 aa		10.36	□□□□□ -0.75
CACNA1A-256	ENST00000637981	ARF4	P18085	180 aa	Predicted RBP	10.36	□□□□□ -0.75
CACNA1A-256	ENST00000637981	PTMS	P20962	102 aa		10.36	□□□□□ -0.75
CACNA1A-256	ENST00000637981	SCP2	P22307	547 aa		10.36	□□□□□ -0.75
CACNA1A-256	ENST00000637981	GUCY2C	P25092	1073 aa		10.36	□□□□□ -0.75
CACNA1A-256	ENST00000637981	SLC12A3	P55017	1021 aa		10.36	□□□□□ -0.75
CACNA1A-256	ENST00000637981	NTHL1	P78549	312 aa		10.36	□□□□□ -0.75
CACNA1A-256	ENST00000637981	PRKCQ	Q04759	706 aa		10.36	□□□□□ -0.75
CACNA1A-256	ENST00000637981	CSTF1	Q05048	431 aa	Known RBP	10.36	□□□□□ -0.75
CACNA1A-256	ENST00000637981	MBTD1	Q05BQ5	628 aa		10.36	□□□□□ -0.75
CACNA1A-256	ENST00000637981	FAM160A1	Q05DH4	1040 aa		10.36	□□□□□ -0.75
CACNA1A-256	ENST00000637981	GRIK3	Q13003	919 aa		10.36	□□□□□ -0.75
CACNA1A-256	ENST00000637981	DHX8	Q14562	1220 aa	Known RBP	10.36	□□□□□ -0.75
CACNA1A-256	ENST00000637981	MCM6	Q14566	821 aa		10.36	□□□□□ -0.75
CACNA1A-256	ENST00000637981	SLC44A4	Q53GD3	710 aa		10.36	□□□□□ -0.75
CACNA1A-256	ENST00000637981	RTP2	Q5QGT7	225 aa		10.36	□□□□□ -0.75
CACNA1A-256	ENST00000637981	PPM1L	Q5SGD2	360 aa		10.36	□□□□□ -0.75
CACNA1A-256	ENST00000637981	LIN9	Q5TKA1	542 aa		10.36	□□□□□ -0.75
CACNA1A-256	ENST00000637981	RINT1	Q6NUQ1	792 aa		10.36	□□□□□ -0.75
CACNA1A-256	ENST00000637981	KCNK18	Q7Z418	384 aa		10.36	□□□□□ -0.75
CACNA1A-256	ENST00000637981	GPBP1	Q86WP2	473 aa		10.36	□□□□□ -0.75
CACNA1A-256	ENST00000637981	CEP57	Q86XR8	500 aa		10.36	□□□□□ -0.75
CACNA1A-256	ENST00000637981	HASPIN	Q8TF76	798 aa		10.36	□□□□□ -0.75
CACNA1A-256	ENST00000637981	ATRIP	Q8WXE1	791 aa		10.36	□□□□□ -0.75
CACNA1A-256	ENST00000637981	FGF13	Q92913	245 aa		10.36	□□□□□ -0.75
CACNA1A-256	ENST00000637981	DDX23	Q9BUQ8	820 aa	Known RBP	10.36	□□□□□ -0.75
CACNA1A-256	ENST00000637981	XPNPEP1	Q9NQW7	623 aa		10.36	□□□□□ -0.75
CACNA1A-256	ENST00000637981	KLK14	Q9P0G3	267 aa		10.36	□□□□□ -0.75
CACNA1A-256	ENST00000637981	CACNG4	Q9UBN1	327 aa		10.36	□□□□□ -0.75
CACNA1A-256	ENST00000637981	FBXW11	Q9UKB1	542 aa		10.36	□□□□□ -0.75
CACNA1A-256	ENST00000637981	ODF2L	Q9ULJ1	636 aa		10.36	□□□□□ -0.75
CACNA1A-256	ENST00000637981	POLI	Q9UNA4	740 aa		10.36	□□□□□ -0.75
CACNA1A-256	ENST00000637981	HPSE	Q9Y251	543 aa		10.36	□□□□□ -0.75
CACNA1A-256	ENST00000637981	PCDHGA2	Q9Y5H1	932 aa		10.36	□□□□□ -0.75
CACNA1A-256	ENST00000637981	SF3B1	O75533	1304 aa	Known RBP eCLIP	10.36	□□□□□ -0.75
CACNA1A-256	ENST00000637981	PHLPP2	Q6ZVD8	1323 aa		10.36	□□□□□ -0.75
CACNA1A-256	ENST00000637981	ZNF292	O60281	2723 aa		10.36	□□□□□ -0.75
CACNA1A-256	ENST00000637981		A0A087WWV3	80 aa		10.35	□□□□□ -0.75
CACNA1A-256	ENST00000637981		H0YCG3	227 aa		10.35	□□□□□ -0.75
CACNA1A-256	ENST00000637981	CCL16	O15467	120 aa		10.35	□□□□□ -0.75
CACNA1A-256	ENST00000637981	XYLB	O75191	536 aa		10.35	□□□□□ -0.75
CACNA1A-256	ENST00000637981	TBCA	O75347	108 aa	Known RBP	10.35	□□□□□ -0.75
CACNA1A-256	ENST00000637981	KRT37	O76014	449 aa		10.35	□□□□□ -0.75
CACNA1A-256	ENST00000637981	ZNF202	O95125	648 aa		10.35	□□□□□ -0.75
CACNA1A-256	ENST00000637981	NPTXR	O95502	500 aa		10.35	□□□□□ -0.75
CACNA1A-256	ENST00000637981	C8A	P07357	584 aa		10.35	□□□□□ -0.75
CACNA1A-256	ENST00000637981	CD72	P21854	359 aa		10.35	□□□□□ -0.75
CACNA1A-256	ENST00000637981	SDHB	P21912	280 aa		10.35	□□□□□ -0.75
CACNA1A-256	ENST00000637981	ABCD1	P33897	745 aa		10.35	□□□□□ -0.75
CACNA1A-256	ENST00000637981	NDUFA8	P51970	172 aa		10.35	□□□□□ -0.75
CACNA1A-256	ENST00000637981	SMTN	P53814	917 aa		10.35	□□□□□ -0.75
CACNA1A-256	ENST00000637981	PFKP	Q01813	784 aa		10.35	□□□□□ -0.75
CACNA1A-256	ENST00000637981	POU5F1B	Q06416	359 aa		10.35	□□□□□ -0.75
CACNA1A-256	ENST00000637981	CAPS	Q13938	189 aa		10.35	□□□□□ -0.75
CACNA1A-256	ENST00000637981	HSP90AA2P	Q14568	343 aa	Predicted RBP	10.35	□□□□□ -0.75
CACNA1A-256	ENST00000637981	E2F4	Q16254	413 aa		10.35	□□□□□ -0.75
CACNA1A-256	ENST00000637981	AMHR2	Q16671	573 aa		10.35	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms