RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 CDC25BP30305 580 aa17.87■□□□□ 0.45
CACNA1A-253ENST00000637927 PGS1Q32NB8 556 aa17.87■□□□□ 0.45
CACNA1A-253ENST00000637927 KRT39Q6A163 491 aa17.87■□□□□ 0.45
CACNA1A-253ENST00000637927 PDIK1LQ8N165 341 aa17.87■□□□□ 0.45
CACNA1A-253ENST00000637927 TMEM245Q9H330 911 aa17.87■□□□□ 0.45
CACNA1A-253ENST00000637927 ECT2Q9H8V3 914 aa17.87■□□□□ 0.45
CACNA1A-253ENST00000637927 ASNSD1Q9NWL6 643 aa17.87■□□□□ 0.45
CACNA1A-253ENST00000637927 ARHGEF37A1IGU5 675 aa17.87■□□□□ 0.45
CACNA1A-253ENST00000637927 C6orf222P0C671 652 aaPredicted RBP17.87■□□□□ 0.45
CACNA1A-253ENST00000637927 ZFXP17010 805 aaPredicted RBP17.87■□□□□ 0.45
CACNA1A-253ENST00000637927 ROR1Q01973 937 aa17.87■□□□□ 0.45
CACNA1A-253ENST00000637927 ARHGEF25Q86VW2 580 aa17.87■□□□□ 0.45
CACNA1A-253ENST00000637927 FOPNLQ96NB1 174 aa17.87■□□□□ 0.45
CACNA1A-253ENST00000637927 VTI1BQ9UEU0 232 aa17.87■□□□□ 0.45
CACNA1A-253ENST00000637927 ATP6V1HQ9UI12 483 aa17.87■□□□□ 0.45
CACNA1A-253ENST00000637927 SH3BGRLO75368 114 aa17.86■□□□□ 0.45
CACNA1A-253ENST00000637927 VAMP7P51809 220 aa17.86■□□□□ 0.45
CACNA1A-253ENST00000637927 ALKBH5Q6P6C2 394 aaKnown RBP17.86■□□□□ 0.45
CACNA1A-253ENST00000637927 PNMA5Q96PV4 448 aa17.86■□□□□ 0.45
CACNA1A-253ENST00000637927 MAP3K20Q9NYL2 800 aaKnown RBP17.86■□□□□ 0.45
CACNA1A-253ENST00000637927 KCNQ2O43526 872 aa17.86■□□□□ 0.45
CACNA1A-253ENST00000637927 GSTM1P09488 218 aa17.86■□□□□ 0.45
CACNA1A-253ENST00000637927 RAD54LQ92698 747 aa17.86■□□□□ 0.45
CACNA1A-253ENST00000637927 UNKQ9C0B0 810 aaKnown RBP17.86■□□□□ 0.45
CACNA1A-253ENST00000637927 CCDC15Q0P6D6 951 aa17.86■□□□□ 0.45
CACNA1A-253ENST00000637927 DPYDQ12882 1025 aa17.86■□□□□ 0.45
CACNA1A-253ENST00000637927 FBXL21Q9UKT6 434 aa17.86■□□□□ 0.45
CACNA1A-253ENST00000637927 MMEP08473 750 aa17.86■□□□□ 0.45
CACNA1A-253ENST00000637927 HMGCS2P54868 508 aa17.86■□□□□ 0.45
CACNA1A-253ENST00000637927 GOLPH3LQ9H4A5 285 aa17.86■□□□□ 0.45
CACNA1A-253ENST00000637927 SNX8Q9Y5X2 465 aa17.86■□□□□ 0.45
CACNA1A-253ENST00000637927 NPHP4O75161 1426 aaPredicted RBP17.86■□□□□ 0.45
CACNA1A-253ENST00000637927 IKBKBO14920 756 aa17.86■□□□□ 0.45
CACNA1A-253ENST00000637927 FGFR4P22455 802 aa17.86■□□□□ 0.45
CACNA1A-253ENST00000637927 CHI3L1P36222 383 aaPredicted RBP17.86■□□□□ 0.45
CACNA1A-253ENST00000637927 GSSP48637 474 aa17.86■□□□□ 0.45
CACNA1A-253ENST00000637927 SLC30A5Q8TAD4 765 aa17.86■□□□□ 0.45
CACNA1A-253ENST00000637927 KIF28PB7ZC32 967 aa17.86■□□□□ 0.45
CACNA1A-253ENST00000637927 CCNE1P24864 410 aa17.86■□□□□ 0.45
CACNA1A-253ENST00000637927 ACSF2Q96CM8 615 aaPredicted RBP17.86■□□□□ 0.45
CACNA1A-253ENST00000637927 ZC3H7BQ9UGR2 993 aaKnown RBP17.86■□□□□ 0.45
CACNA1A-253ENST00000637927 ENO4A6NNW6 628 aa17.85■□□□□ 0.45
CACNA1A-253ENST00000637927 PYGBP11216 843 aa17.85■□□□□ 0.45
CACNA1A-253ENST00000637927 NFIL3Q16649 462 aa17.85■□□□□ 0.45
CACNA1A-253ENST00000637927 PODNQ7Z5L7 613 aa17.85■□□□□ 0.45
CACNA1A-253ENST00000637927 LXNQ9BS40 222 aa17.85■□□□□ 0.45
CACNA1A-253ENST00000637927 GUCA1AP43080 201 aaPredicted RBP17.85■□□□□ 0.45
CACNA1A-253ENST00000637927 ORC1Q13415 861 aa17.85■□□□□ 0.45
CACNA1A-253ENST00000637927 NACC2Q96BF6 587 aa17.85■□□□□ 0.45
CACNA1A-253ENST00000637927 CLIP3Q96DZ5 547 aa17.85■□□□□ 0.45
CACNA1A-253ENST00000637927 RGS5O15539 181 aa17.85■□□□□ 0.45
CACNA1A-253ENST00000637927 ITGAXP20702 1163 aa17.85■□□□□ 0.45
CACNA1A-253ENST00000637927 PLOD1Q02809 727 aaPredicted RBP17.85■□□□□ 0.45
CACNA1A-253ENST00000637927 RESTQ13127 1097 aa17.85■□□□□ 0.45
CACNA1A-253ENST00000637927 KRT78Q8N1N4 520 aa17.85■□□□□ 0.45
CACNA1A-253ENST00000637927 SPATA18Q8TC71 538 aa17.85■□□□□ 0.45
CACNA1A-253ENST00000637927 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.85■□□□□ 0.45
CACNA1A-253ENST00000637927 RRP15Q9Y3B9 282 aaKnown RBP17.85■□□□□ 0.45
CACNA1A-253ENST00000637927 NFIBO00712 420 aa17.85■□□□□ 0.45
CACNA1A-253ENST00000637927 ZNF197O14709 1029 aa17.85■□□□□ 0.45
CACNA1A-253ENST00000637927 ZBTB39O15060 712 aa17.85■□□□□ 0.45
CACNA1A-253ENST00000637927 ASAP2O43150 1006 aa17.85■□□□□ 0.45
CACNA1A-253ENST00000637927 TMC2Q8TDI7 906 aa17.85■□□□□ 0.45
CACNA1A-253ENST00000637927 NBPF26B4DH59 902 aa17.85■□□□□ 0.45
CACNA1A-253ENST00000637927 ATP1A1P05023 1023 aaKnown RBP17.85■□□□□ 0.45
CACNA1A-253ENST00000637927 TNNI3P19429 210 aa17.85■□□□□ 0.45
CACNA1A-253ENST00000637927 NR1D1P20393 614 aa17.85■□□□□ 0.45
CACNA1A-253ENST00000637927 TNFAIP2Q03169 654 aa17.85■□□□□ 0.45
CACNA1A-253ENST00000637927 C16orf72Q14CZ0 275 aa17.85■□□□□ 0.45
CACNA1A-253ENST00000637927 ZNF555Q8NEP9 628 aa17.85■□□□□ 0.45
CACNA1A-253ENST00000637927 ZNF564Q8TBZ8 553 aaPredicted RBP17.85■□□□□ 0.45
CACNA1A-253ENST00000637927 NEK9Q8TD19 979 aa17.85■□□□□ 0.45
CACNA1A-253ENST00000637927 ACAP3Q96P50 834 aa17.85■□□□□ 0.45
CACNA1A-253ENST00000637927 PLEKHA5Q9HAU0 1116 aa17.85■□□□□ 0.45
CACNA1A-253ENST00000637927 KLK14Q9P0G3 267 aa17.85■□□□□ 0.45
CACNA1A-253ENST00000637927 MYO5CQ9NQX4 1742 aa17.85■□□□□ 0.45
CACNA1A-253ENST00000637927 RNF103O00237 685 aa17.84■□□□□ 0.45
CACNA1A-253ENST00000637927 LDHAP00338 332 aaKnown RBP17.84■□□□□ 0.45
CACNA1A-253ENST00000637927 TRIM49P0CI25 452 aa17.84■□□□□ 0.45
CACNA1A-253ENST00000637927 TRIM49CP0CI26 452 aa17.84■□□□□ 0.45
CACNA1A-253ENST00000637927 TPI1P60174 286 aa17.84■□□□□ 0.45
CACNA1A-253ENST00000637927 PTRHD1Q6GMV3 140 aaKnown RBP17.84■□□□□ 0.45
CACNA1A-253ENST00000637927 HDAC6Q9UBN7 1215 aa17.84■□□□□ 0.45
CACNA1A-253ENST00000637927 EFHC2Q5JST6 749 aa17.84■□□□□ 0.45
CACNA1A-253ENST00000637927 EPHA10Q5JZY3 1008 aa17.84■□□□□ 0.45
CACNA1A-253ENST00000637927 A0A1W2PQ27 194 aa17.84■□□□□ 0.45
CACNA1A-253ENST00000637927 A0A1W2PQ64 194 aa17.84■□□□□ 0.45
CACNA1A-253ENST00000637927 A0A1W2PQD8 194 aa17.84■□□□□ 0.45
CACNA1A-253ENST00000637927 XPO1O14980 1071 aaKnown RBP17.84■□□□□ 0.45
CACNA1A-253ENST00000637927 ABCB1P08183 1280 aaPredicted RBP17.84■□□□□ 0.45
CACNA1A-253ENST00000637927 ACADMP11310 421 aa17.84■□□□□ 0.45
CACNA1A-253ENST00000637927 HPGDP15428 266 aa17.84■□□□□ 0.45
CACNA1A-253ENST00000637927 DEFB128Q7Z7B8 93 aa17.84■□□□□ 0.45
CACNA1A-253ENST00000637927 OOSP2Q86WS3 158 aa17.84■□□□□ 0.45
CACNA1A-253ENST00000637927 TMEM143Q96AN5 459 aa17.84■□□□□ 0.45
CACNA1A-253ENST00000637927 CD209Q9NNX6 404 aa17.84■□□□□ 0.45
CACNA1A-253ENST00000637927 PRKAB1Q9Y478 270 aa17.84■□□□□ 0.45
CACNA1A-253ENST00000637927 CPDO75976 1380 aa17.84■□□□□ 0.45
CACNA1A-253ENST00000637927 TDP2O95551 362 aa17.84■□□□□ 0.45
CACNA1A-253ENST00000637927 CEP55Q53EZ4 464 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms