RNA–Protein interactions for RNA: ENST00000637769.1

CACNA1A-247, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-247ENST00000637769 NUP93Q8N1F7 819 aa18.91■□□□□ 0.62
CACNA1A-247ENST00000637769 ATPAF2Q8N5M1 289 aa18.91■□□□□ 0.62
CACNA1A-247ENST00000637769 ANKRD27Q96NW4 1050 aa18.91■□□□□ 0.62
CACNA1A-247ENST00000637769 RMDN3Q96TC7 470 aa18.91■□□□□ 0.62
CACNA1A-247ENST00000637769 ANKARQ7Z5J8 1434 aa18.91■□□□□ 0.62
CACNA1A-247ENST00000637769 A0A1W2PQC6 194 aa18.91■□□□□ 0.62
CACNA1A-247ENST00000637769 CENPXA8MT69 81 aa18.91■□□□□ 0.62
CACNA1A-247ENST00000637769 RRM2P31350 389 aa18.91■□□□□ 0.62
CACNA1A-247ENST00000637769 CYP27A1Q02318 531 aa18.91■□□□□ 0.62
CACNA1A-247ENST00000637769 DCAF4L1Q3SXM0 396 aa18.91■□□□□ 0.62
CACNA1A-247ENST00000637769 LRIG3Q6UXM1 1119 aa18.91■□□□□ 0.62
CACNA1A-247ENST00000637769 LCORLQ8N3X6 602 aa18.91■□□□□ 0.62
CACNA1A-247ENST00000637769 DPP10Q8N608 796 aa18.91■□□□□ 0.62
CACNA1A-247ENST00000637769 STKLD1Q8NE28 680 aa18.91■□□□□ 0.62
CACNA1A-247ENST00000637769 CLEC4MQ9H2X3 399 aaPredicted RBP18.91■□□□□ 0.62
CACNA1A-247ENST00000637769 TRABDQ9H4I3 376 aa18.91■□□□□ 0.62
CACNA1A-247ENST00000637769 M0QYV0 167 aa18.91■□□□□ 0.62
CACNA1A-247ENST00000637769 ZBTB5O15062 677 aa18.91■□□□□ 0.62
CACNA1A-247ENST00000637769 FAM45AQ8TCE6 357 aa18.91■□□□□ 0.62
CACNA1A-247ENST00000637769 TMA16Q96EY4 203 aaKnown RBP18.91■□□□□ 0.62
CACNA1A-247ENST00000637769 UBA2Q9UBT2 640 aaPredicted RBP18.91■□□□□ 0.62
CACNA1A-247ENST00000637769 MARK3P27448 753 aa18.9■□□□□ 0.62
CACNA1A-247ENST00000637769 ILF2Q12905 390 aaKnown RBP18.9■□□□□ 0.62
CACNA1A-247ENST00000637769 BTBD8Q5XKL5 378 aa18.9■□□□□ 0.62
CACNA1A-247ENST00000637769 DSG1Q02413 1049 aa18.9■□□□□ 0.62
CACNA1A-247ENST00000637769 C3orf20Q8ND61 904 aa18.9■□□□□ 0.62
CACNA1A-247ENST00000637769 LATS2Q9NRM7 1088 aa18.9■□□□□ 0.62
CACNA1A-247ENST00000637769 SEC24DO94855 1032 aaPredicted RBP18.9■□□□□ 0.62
CACNA1A-247ENST00000637769 ACADSP16219 412 aa18.9■□□□□ 0.62
CACNA1A-247ENST00000637769 ALDH18A1P54886 795 aaKnown RBP18.9■□□□□ 0.62
CACNA1A-247ENST00000637769 KDSRQ06136 332 aa18.9■□□□□ 0.62
CACNA1A-247ENST00000637769 TTC7AQ9ULT0 858 aaPredicted RBP18.9■□□□□ 0.62
CACNA1A-247ENST00000637769 SF3B1O75533 1304 aaKnown RBP eCLIP18.9■□□□□ 0.62
CACNA1A-247ENST00000637769 APRTP07741 180 aa18.9■□□□□ 0.62
CACNA1A-247ENST00000637769 ARHGEF7Q14155 803 aa18.9■□□□□ 0.62
CACNA1A-247ENST00000637769 LLGL1Q15334 1064 aa18.9■□□□□ 0.62
CACNA1A-247ENST00000637769 DGKHQ86XP1 1220 aa18.9■□□□□ 0.62
CACNA1A-247ENST00000637769 CTNNAL1Q9UBT7 734 aa18.9■□□□□ 0.62
CACNA1A-247ENST00000637769 PVALEFA0A1B0GWK0 134 aa18.9■□□□□ 0.62
CACNA1A-247ENST00000637769 C19orf18Q8NEA5 215 aa18.9■□□□□ 0.62
CACNA1A-247ENST00000637769 PKP3Q9Y446 797 aa18.9■□□□□ 0.62
CACNA1A-247ENST00000637769 KRT20P35900 424 aa18.9■□□□□ 0.62
CACNA1A-247ENST00000637769 IZUMO3Q5VZ72 239 aa18.9■□□□□ 0.62
CACNA1A-247ENST00000637769 SHCBP1Q8NEM2 672 aa18.9■□□□□ 0.62
CACNA1A-247ENST00000637769 ARHGEF38Q9NXL2 777 aa18.9■□□□□ 0.62
CACNA1A-247ENST00000637769 ZC3H7BQ9UGR2 993 aaKnown RBP18.9■□□□□ 0.62
CACNA1A-247ENST00000637769 AFF4Q9UHB7 1163 aaKnown RBP18.9■□□□□ 0.62
CACNA1A-247ENST00000637769 USP39Q53GS9 565 aaKnown RBP18.9■□□□□ 0.62
CACNA1A-247ENST00000637769 RFWD2Q8NHY2 731 aa18.9■□□□□ 0.62
CACNA1A-247ENST00000637769 POLBP06746 335 aa18.89■□□□□ 0.62
CACNA1A-247ENST00000637769 VSNL1P62760 191 aa18.89■□□□□ 0.62
CACNA1A-247ENST00000637769 CNTN1Q12860 1018 aa18.89■□□□□ 0.62
CACNA1A-247ENST00000637769 TTC39BQ5VTQ0 682 aaPredicted RBP18.89■□□□□ 0.62
CACNA1A-247ENST00000637769 RTKN2Q8IZC4 609 aa18.89■□□□□ 0.61
CACNA1A-247ENST00000637769 KCND2Q9NZV8 630 aa18.89■□□□□ 0.61
CACNA1A-247ENST00000637769 ENO1P06733 434 aaKnown RBP18.89■□□□□ 0.61
CACNA1A-247ENST00000637769 RXRGP48443 463 aa18.89■□□□□ 0.61
CACNA1A-247ENST00000637769 CCT8P50990 548 aa18.89■□□□□ 0.61
CACNA1A-247ENST00000637769 KCNK10P57789 538 aa18.89■□□□□ 0.61
CACNA1A-247ENST00000637769 NEK10Q6ZWH5 1172 aa18.89■□□□□ 0.61
CACNA1A-247ENST00000637769 NME3Q13232 169 aa18.89■□□□□ 0.61
CACNA1A-247ENST00000637769 DHX35Q9H5Z1 703 aaKnown RBP18.89■□□□□ 0.61
CACNA1A-247ENST00000637769 AATKQ6ZMQ8 1374 aa18.89■□□□□ 0.61
CACNA1A-247ENST00000637769 CNTRLQ7Z7A1 2325 aa18.89■□□□□ 0.61
CACNA1A-247ENST00000637769 PSMC6P62333 389 aa18.89■□□□□ 0.61
CACNA1A-247ENST00000637769 POTEEQ6S8J3 1075 aa18.89■□□□□ 0.61
CACNA1A-247ENST00000637769 MOSPD2Q8NHP6 518 aa18.89■□□□□ 0.61
CACNA1A-247ENST00000637769 CNDP1Q96KN2 507 aa18.89■□□□□ 0.61
CACNA1A-247ENST00000637769 SLC24A3Q9HC58 644 aa18.89■□□□□ 0.61
CACNA1A-247ENST00000637769 DMAP1Q9NPF5 467 aaPredicted RBP18.89■□□□□ 0.61
CACNA1A-247ENST00000637769 SPHKAPQ2M3C7 1700 aa18.89■□□□□ 0.61
CACNA1A-247ENST00000637769 KCNN4O15554 427 aa18.89■□□□□ 0.61
CACNA1A-247ENST00000637769 SHROOM1Q2M3G4 852 aaPredicted RBP18.89■□□□□ 0.61
CACNA1A-247ENST00000637769 PRMT1Q99873 361 aaKnown RBP18.89■□□□□ 0.61
CACNA1A-247ENST00000637769 MTA3Q9BTC8 594 aa18.89■□□□□ 0.61
CACNA1A-247ENST00000637769 NCAPD2Q15021 1401 aa18.89■□□□□ 0.61
CACNA1A-247ENST00000637769 URB1O60287 2271 aaKnown RBP18.89■□□□□ 0.61
CACNA1A-247ENST00000637769 SRP72O76094 671 aaKnown RBP18.88■□□□□ 0.61
CACNA1A-247ENST00000637769 SPRP35270 261 aaPredicted RBP18.88■□□□□ 0.61
CACNA1A-247ENST00000637769 PPP3CCP48454 512 aa18.88■□□□□ 0.61
CACNA1A-247ENST00000637769 SNX30Q5VWJ9 437 aa18.88■□□□□ 0.61
CACNA1A-247ENST00000637769 LRRC49Q8IUZ0 686 aa18.88■□□□□ 0.61
CACNA1A-247ENST00000637769 PIGUQ9H490 435 aa18.88■□□□□ 0.61
CACNA1A-247ENST00000637769 CNGB3Q9NQW8 809 aa18.88■□□□□ 0.61
CACNA1A-247ENST00000637769 FCGR1AP12314 374 aa18.88■□□□□ 0.61
CACNA1A-247ENST00000637769 EIF3EP60228 445 aaKnown RBP18.88■□□□□ 0.61
CACNA1A-247ENST00000637769 QRICH2Q9H0J4 1663 aa18.88■□□□□ 0.61
CACNA1A-247ENST00000637769 RGS5O15539 181 aa18.88■□□□□ 0.61
CACNA1A-247ENST00000637769 FTLP02792 175 aaPredicted RBP18.88■□□□□ 0.61
CACNA1A-247ENST00000637769 SERPINH1P50454 418 aaKnown RBP18.88■□□□□ 0.61
CACNA1A-247ENST00000637769 STX5Q13190 355 aa18.88■□□□□ 0.61
CACNA1A-247ENST00000637769 TTC33Q6PID6 262 aaPredicted RBP18.88■□□□□ 0.61
CACNA1A-247ENST00000637769 PIGSQ96S52 555 aa18.88■□□□□ 0.61
CACNA1A-247ENST00000637769 TRIM24O15164 1050 aa18.88■□□□□ 0.61
CACNA1A-247ENST00000637769 HIST2H2ACQ16777 129 aaPredicted RBP18.88■□□□□ 0.61
CACNA1A-247ENST00000637769 HIST2H2AA3Q6FI13 130 aa18.88■□□□□ 0.61
CACNA1A-247ENST00000637769 SENP7Q9BQF6 1050 aa18.88■□□□□ 0.61
CACNA1A-247ENST00000637769 BMP10O95393 424 aa18.88■□□□□ 0.61
CACNA1A-247ENST00000637769 CARD14Q9BXL6 1004 aa18.88■□□□□ 0.61
CACNA1A-247ENST00000637769 ARMC7Q9H6L4 198 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms