RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 GOT1L1Q8NHS2 421 aaPredicted RBP3.31□□□□□ -1.88
VIM-210ENST00000637053 SLC35G2Q8TBE7 412 aa3.31□□□□□ -1.88
VIM-210ENST00000637053 DIS3LQ8TF46 1054 aaKnown RBP3.31□□□□□ -1.88
VIM-210ENST00000637053 UCMAQ8WVF2 138 aa3.31□□□□□ -1.88
VIM-210ENST00000637053 SHC3Q92529 594 aa3.31□□□□□ -1.88
VIM-210ENST00000637053 USP7Q93009 1102 aa3.31□□□□□ -1.88
VIM-210ENST00000637053 HSPBAP1Q96EW2 488 aa3.31□□□□□ -1.88
VIM-210ENST00000637053 BICD1Q96G01 975 aa3.31□□□□□ -1.88
VIM-210ENST00000637053 DHTKD1Q96HY7 919 aaPredicted RBP3.31□□□□□ -1.88
VIM-210ENST00000637053 MAP6Q96JE9 813 aa3.31□□□□□ -1.88
VIM-210ENST00000637053 HHIPL1Q96JK4 782 aa3.31□□□□□ -1.88
VIM-210ENST00000637053 RIPOR3Q96MK2 946 aa3.31□□□□□ -1.88
VIM-210ENST00000637053 TAAR9Q96RI9 348 aa3.31□□□□□ -1.88
VIM-210ENST00000637053 FERD3LQ96RJ6 166 aa3.31□□□□□ -1.88
VIM-210ENST00000637053 CRBNQ96SW2 442 aa3.31□□□□□ -1.88
VIM-210ENST00000637053 NUP88Q99567 741 aaPredicted RBP3.31□□□□□ -1.88
VIM-210ENST00000637053 SPATA25Q9BR10 227 aa3.31□□□□□ -1.88
VIM-210ENST00000637053 C1QTNF3Q9BXJ4 246 aa3.31□□□□□ -1.88
VIM-210ENST00000637053 CAPS2Q9BXY5 557 aa3.31□□□□□ -1.88
VIM-210ENST00000637053 LRRCC1Q9C099 1032 aa3.31□□□□□ -1.88
VIM-210ENST00000637053 SRCIN1Q9C0H9 1055 aa3.31□□□□□ -1.88
VIM-210ENST00000637053 VPS11Q9H270 941 aa3.31□□□□□ -1.88
VIM-210ENST00000637053 TAOK3Q9H2K8 898 aa3.31□□□□□ -1.88
VIM-210ENST00000637053 SEMA4AQ9H3S1 761 aa3.31□□□□□ -1.88
VIM-210ENST00000637053 SMOC1Q9H4F8 434 aa3.31□□□□□ -1.88
VIM-210ENST00000637053 SLITRK6Q9H5Y7 841 aa3.31□□□□□ -1.88
VIM-210ENST00000637053 VCPKMTQ9H867 229 aa3.31□□□□□ -1.88
VIM-210ENST00000637053 VEZTQ9HBM0 779 aa3.31□□□□□ -1.88
VIM-210ENST00000637053 SPON1Q9HCB6 807 aa3.31□□□□□ -1.88
VIM-210ENST00000637053 WASH6PQ9NQA3 447 aa3.31□□□□□ -1.88
VIM-210ENST00000637053 ZNF277Q9NRM2 450 aaPredicted RBP3.31□□□□□ -1.88
VIM-210ENST00000637053 OLA1Q9NTK5 396 aaKnown RBP3.31□□□□□ -1.88
VIM-210ENST00000637053 INTS10Q9NVR2 710 aaKnown RBP3.31□□□□□ -1.88
VIM-210ENST00000637053 MCM9Q9NXL9 1143 aa3.31□□□□□ -1.88
VIM-210ENST00000637053 CHMP5Q9NZZ3 219 aa3.31□□□□□ -1.88
VIM-210ENST00000637053 CALCOCO1Q9P1Z2 691 aa3.31□□□□□ -1.88
VIM-210ENST00000637053 AASSQ9UDR5 926 aa3.31□□□□□ -1.88
VIM-210ENST00000637053 TBC1D29Q9UFV1 150 aa3.31□□□□□ -1.88
VIM-210ENST00000637053 KCNH3Q9ULD8 1083 aa3.31□□□□□ -1.88
VIM-210ENST00000637053 DENND2AQ9ULE3 1009 aa3.31□□□□□ -1.88
VIM-210ENST00000637053 PPM1HQ9ULR3 514 aa3.31□□□□□ -1.88
VIM-210ENST00000637053 JRKLQ9Y4A0 524 aa3.31□□□□□ -1.88
VIM-210ENST00000637053 PCDHGB6Q9Y5F9 930 aa3.31□□□□□ -1.88
VIM-210ENST00000637053 PCDHGB5Q9Y5G0 923 aa3.31□□□□□ -1.88
VIM-210ENST00000637053 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.3□□□□□ -1.88
VIM-210ENST00000637053 IRS2Q9Y4H2 1338 aa3.3□□□□□ -1.88
VIM-210ENST00000637053 A0A087WV62 115 aa3.3□□□□□ -1.88
VIM-210ENST00000637053 A0A087X0M5 115 aa3.3□□□□□ -1.88
VIM-210ENST00000637053 GPR75-ASB3A0A0A6YYF3 556 aa3.3□□□□□ -1.88
VIM-210ENST00000637053 A0A1B0GX30 115 aa3.3□□□□□ -1.88
VIM-210ENST00000637053 A0A1W2PPH5 198 aa3.3□□□□□ -1.88
VIM-210ENST00000637053 TMEM82A0PJX8 343 aa3.3□□□□□ -1.88
VIM-210ENST00000637053 F5H0A9 414 aaPredicted RBP3.3□□□□□ -1.88
VIM-210ENST00000637053 K7ESF4 209 aa3.3□□□□□ -1.88
VIM-210ENST00000637053 UBXN8O00124 270 aa3.3□□□□□ -1.88
VIM-210ENST00000637053 ABLIM1O14639 778 aa3.3□□□□□ -1.88
VIM-210ENST00000637053 DOK2O60496 412 aa3.3□□□□□ -1.88
VIM-210ENST00000637053 KINO60870 393 aaKnown RBP3.3□□□□□ -1.88
VIM-210ENST00000637053 SLC22A3O75751 556 aa3.3□□□□□ -1.88
VIM-210ENST00000637053 DNAJC8O75937 253 aaPredicted RBP3.3□□□□□ -1.88
VIM-210ENST00000637053 CDKL5O76039 1030 aa3.3□□□□□ -1.88
VIM-210ENST00000637053 DDHD2O94830 711 aa3.3□□□□□ -1.88
VIM-210ENST00000637053 ENDOD1O94919 500 aa3.3□□□□□ -1.88
VIM-210ENST00000637053 PLA2G1BP04054 148 aaKnown RBP3.3□□□□□ -1.88
VIM-210ENST00000637053 POLBP06746 335 aa3.3□□□□□ -1.88
VIM-210ENST00000637053 ADRB2P07550 413 aa3.3□□□□□ -1.88
VIM-210ENST00000637053 MYBP10242 640 aa3.3□□□□□ -1.88
VIM-210ENST00000637053 TOP1P11387 765 aaKnown RBP3.3□□□□□ -1.88
VIM-210ENST00000637053 PCP11498 1178 aaKnown RBP3.3□□□□□ -1.88
VIM-210ENST00000637053 ZNF24P17028 368 aa3.3□□□□□ -1.88
VIM-210ENST00000637053 BPIP17213 487 aa3.3□□□□□ -1.88
VIM-210ENST00000637053 POU3F2P20265 443 aaPredicted RBP3.3□□□□□ -1.88
VIM-210ENST00000637053 ABCB4P21439 1286 aa3.3□□□□□ -1.88
VIM-210ENST00000637053 CNTFP26441 200 aa3.3□□□□□ -1.88
VIM-210ENST00000637053 RPL10P27635 214 aaKnown RBP3.3□□□□□ -1.88
VIM-210ENST00000637053 GSTT1P30711 240 aa3.3□□□□□ -1.88
VIM-210ENST00000637053 ACTN2P35609 894 aa3.3□□□□□ -1.88
VIM-210ENST00000637053 GNL1P36915 607 aaPredicted RBP3.3□□□□□ -1.88
VIM-210ENST00000637053 HSD17B2P37059 387 aa3.3□□□□□ -1.88
VIM-210ENST00000637053 MATR3P43243 847 aaKnown RBP eCLIP3.3□□□□□ -1.88
VIM-210ENST00000637053 POLD2P49005 469 aa3.3□□□□□ -1.88
VIM-210ENST00000637053 SULT1E1P49888 294 aa3.3□□□□□ -1.88
VIM-210ENST00000637053 ALDH3A2P51648 485 aa3.3□□□□□ -1.88
VIM-210ENST00000637053 ARFIP1P53367 373 aa3.3□□□□□ -1.88
VIM-210ENST00000637053 RELQ04864 619 aaPredicted RBP3.3□□□□□ -1.88
VIM-210ENST00000637053 SGCGQ13326 291 aa3.3□□□□□ -1.88
VIM-210ENST00000637053 ADAM15Q13444 863 aa3.3□□□□□ -1.88
VIM-210ENST00000637053 PRKG1Q13976 671 aa3.3□□□□□ -1.88
VIM-210ENST00000637053 CCDC85BQ15834 202 aaPredicted RBP3.3□□□□□ -1.88
VIM-210ENST00000637053 GEN1Q17RS7 908 aa3.3□□□□□ -1.88
VIM-210ENST00000637053 PROSER3Q2NL68 480 aa3.3□□□□□ -1.88
VIM-210ENST00000637053 MAJINQ3KP22 176 aa3.3□□□□□ -1.88
VIM-210ENST00000637053 INAVAQ3KP66 663 aa3.3□□□□□ -1.88
VIM-210ENST00000637053 CFAP100Q494V2 611 aa3.3□□□□□ -1.88
VIM-210ENST00000637053 SEZ6Q53EL9 994 aa3.3□□□□□ -1.88
VIM-210ENST00000637053 ODF2Q5BJF6 829 aa3.3□□□□□ -1.88
VIM-210ENST00000637053 KRBOX4Q5JUW0 171 aa3.3□□□□□ -1.88
VIM-210ENST00000637053 DGKKQ5KSL6 1271 aa3.3□□□□□ -1.88
VIM-210ENST00000637053 SNAP47Q5SQN1 464 aa3.3□□□□□ -1.88
VIM-210ENST00000637053 CCDC183Q5T5S1 534 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms