RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 OSTNP61366 133 aa12.33□□□□□ -0.44
CLN6-217ENST00000636964 C2orf54Q08AI8 447 aa12.33□□□□□ -0.44
CLN6-217ENST00000636964 PRPF4BQ13523 1007 aaKnown RBP12.33□□□□□ -0.44
CLN6-217ENST00000636964 SPOPLQ6IQ16 392 aa12.33□□□□□ -0.44
CLN6-217ENST00000636964 PLEKHH3Q7Z736 793 aa12.33□□□□□ -0.44
CLN6-217ENST00000636964 SLC47A2Q86VL8 602 aa12.33□□□□□ -0.44
CLN6-217ENST00000636964 MYLK4Q86YV6 388 aaPredicted RBP12.33□□□□□ -0.44
CLN6-217ENST00000636964 GIMAP7Q8NHV1 300 aa12.33□□□□□ -0.44
CLN6-217ENST00000636964 HELQQ8TDG4 1101 aa12.33□□□□□ -0.44
CLN6-217ENST00000636964 MAML3Q96JK9 1138 aa12.33□□□□□ -0.44
CLN6-217ENST00000636964 OSBPL9Q96SU4 736 aa12.33□□□□□ -0.44
CLN6-217ENST00000636964 ERAP1Q9NZ08 941 aa12.33□□□□□ -0.44
CLN6-217ENST00000636964 CHORDC1Q9UHD1 332 aaPredicted RBP12.33□□□□□ -0.44
CLN6-217ENST00000636964 EVPLQ92817 2033 aa12.33□□□□□ -0.44
CLN6-217ENST00000636964 A0A0B4J269 797 aa12.32□□□□□ -0.44
CLN6-217ENST00000636964 GRID2IPA4D2P6 1211 aa12.32□□□□□ -0.44
CLN6-217ENST00000636964 INO80B-WBP1J3KQ70 363 aa12.32□□□□□ -0.44
CLN6-217ENST00000636964 RNASE9P60153 205 aaKnown RBP12.32□□□□□ -0.44
CLN6-217ENST00000636964 ACTN3Q08043 901 aaPredicted RBP12.32□□□□□ -0.44
CLN6-217ENST00000636964 LAMC2Q13753 1193 aa12.32□□□□□ -0.44
CLN6-217ENST00000636964 C16orf87Q6PH81 154 aa12.32□□□□□ -0.44
CLN6-217ENST00000636964 USP37Q86T82 979 aa12.32□□□□□ -0.44
CLN6-217ENST00000636964 MS4A14Q96JA4 679 aa12.32□□□□□ -0.44
CLN6-217ENST00000636964 NT5C1BQ96P26 610 aa12.32□□□□□ -0.44
CLN6-217ENST00000636964 AGPAT1Q99943 283 aa12.32□□□□□ -0.44
CLN6-217ENST00000636964 INO80BQ9C086 356 aaPredicted RBP12.32□□□□□ -0.44
CLN6-217ENST00000636964 TMEM134Q9H6X4 195 aa12.32□□□□□ -0.44
CLN6-217ENST00000636964 STYXL1Q9Y6J8 313 aa12.32□□□□□ -0.44
CLN6-217ENST00000636964 PLXNB2O15031 1838 aa12.32□□□□□ -0.44
CLN6-217ENST00000636964 PLXNA1Q9UIW2 1896 aa12.32□□□□□ -0.44
CLN6-217ENST00000636964 IGF2BP3O00425 579 aaKnown RBP eCLIP12.32□□□□□ -0.44
CLN6-217ENST00000636964 MEFVO15553 781 aaPredicted RBP12.32□□□□□ -0.44
CLN6-217ENST00000636964 B4GALT5O43286 388 aa12.32□□□□□ -0.44
CLN6-217ENST00000636964 HBP1O60381 514 aa12.32□□□□□ -0.44
CLN6-217ENST00000636964 MSCO60682 206 aa12.32□□□□□ -0.44
CLN6-217ENST00000636964 RASSF9O75901 435 aa12.32□□□□□ -0.44
CLN6-217ENST00000636964 ITGBL1O95965 494 aaPredicted RBP12.32□□□□□ -0.44
CLN6-217ENST00000636964 KIF22Q14807 665 aa12.32□□□□□ -0.44
CLN6-217ENST00000636964 SLFN12LQ6IEE8 588 aa12.32□□□□□ -0.44
CLN6-217ENST00000636964 CREG2Q8IUH2 290 aa12.32□□□□□ -0.44
CLN6-217ENST00000636964 PHC3Q8NDX5 983 aa12.32□□□□□ -0.44
CLN6-217ENST00000636964 CCDC26Q8TAB7 109 aa12.32□□□□□ -0.44
CLN6-217ENST00000636964 TCP11Q8WWU5 503 aa12.32□□□□□ -0.44
CLN6-217ENST00000636964 ATXN2Q99700 1313 aaKnown RBP12.32□□□□□ -0.44
CLN6-217ENST00000636964 SYT11Q9BT88 431 aa12.32□□□□□ -0.44
CLN6-217ENST00000636964 VTA1Q9NP79 307 aa12.32□□□□□ -0.44
CLN6-217ENST00000636964 OSGEPQ9NPF4 335 aa12.32□□□□□ -0.44
CLN6-217ENST00000636964 DMGDHQ9UI17 866 aaKnown RBP12.32□□□□□ -0.44
CLN6-217ENST00000636964 COQ4Q9Y3A0 265 aa12.32□□□□□ -0.44
CLN6-217ENST00000636964 IGKV6-21A0A0C4DH24 114 aa12.32□□□□□ -0.44
CLN6-217ENST00000636964 ADCY6O43306 1168 aa12.32□□□□□ -0.44
CLN6-217ENST00000636964 PRKCBP05771 671 aa12.32□□□□□ -0.44
CLN6-217ENST00000636964 SMPD1P17405 629 aa12.32□□□□□ -0.44
CLN6-217ENST00000636964 IBSPP21815 317 aaPredicted RBP12.32□□□□□ -0.44
CLN6-217ENST00000636964 MAGEA8P43361 318 aa12.32□□□□□ -0.44
CLN6-217ENST00000636964 GPC3P51654 580 aa12.32□□□□□ -0.44
CLN6-217ENST00000636964 MFAP3P55082 362 aa12.32□□□□□ -0.44
CLN6-217ENST00000636964 MXD4Q14582 209 aaPredicted RBP12.32□□□□□ -0.44
CLN6-217ENST00000636964 FAM110CQ1W6H9 321 aa12.32□□□□□ -0.44
CLN6-217ENST00000636964 C10orf76Q5T2E6 689 aa12.32□□□□□ -0.44
CLN6-217ENST00000636964 WLSQ5T9L3 541 aa12.32□□□□□ -0.44
CLN6-217ENST00000636964 TDRD10Q5VZ19 366 aaKnown RBP12.32□□□□□ -0.44
CLN6-217ENST00000636964 FMNL3Q8IVF7 1028 aa12.32□□□□□ -0.44
CLN6-217ENST00000636964 N4BP2L2Q92802 583 aaPredicted RBP12.32□□□□□ -0.44
CLN6-217ENST00000636964 KATNBL1Q9H079 304 aa12.32□□□□□ -0.44
CLN6-217ENST00000636964 MINDY3Q9H8M7 445 aa12.32□□□□□ -0.44
CLN6-217ENST00000636964 NENFQ9UMX5 172 aa12.32□□□□□ -0.44
CLN6-217ENST00000636964 HYOU1Q9Y4L1 999 aa12.32□□□□□ -0.44
CLN6-217ENST00000636964 DOCK3Q8IZD9 2030 aa12.32□□□□□ -0.44
CLN6-217ENST00000636964 KRT5P13647 590 aa12.31□□□□□ -0.44
CLN6-217ENST00000636964 SKOR1P84550 965 aa12.31□□□□□ -0.44
CLN6-217ENST00000636964 CCDC15Q0P6D6 951 aa12.31□□□□□ -0.44
CLN6-217ENST00000636964 GRB14Q14449 540 aa12.31□□□□□ -0.44
CLN6-217ENST00000636964 PSMD6Q15008 389 aa12.31□□□□□ -0.44
CLN6-217ENST00000636964 MAPK6Q16659 721 aa12.31□□□□□ -0.44
CLN6-217ENST00000636964 NOP9Q86U38 636 aaKnown RBP12.31□□□□□ -0.44
CLN6-217ENST00000636964 ZBTB8OSQ8IWT0 167 aa12.31□□□□□ -0.44
CLN6-217ENST00000636964 OR5B17Q8NGF7 314 aa12.31□□□□□ -0.44
CLN6-217ENST00000636964 SH3GL3Q99963 347 aa12.31□□□□□ -0.44
CLN6-217ENST00000636964 TINF2Q9BSI4 451 aa12.31□□□□□ -0.44
CLN6-217ENST00000636964 KIAA1586Q9HCI6 787 aa12.31□□□□□ -0.44
CLN6-217ENST00000636964 PIGRP01833 764 aa12.31□□□□□ -0.44
CLN6-217ENST00000636964 HLA-DRAP01903 254 aa12.31□□□□□ -0.44
CLN6-217ENST00000636964 RFX1P22670 979 aa12.31□□□□□ -0.44
CLN6-217ENST00000636964 RWDD2BP57060 319 aa12.31□□□□□ -0.44
CLN6-217ENST00000636964 THNSL1Q8IYQ7 743 aa12.31□□□□□ -0.44
CLN6-217ENST00000636964 MRPL4Q9BYD3 311 aaKnown RBP12.31□□□□□ -0.44
CLN6-217ENST00000636964 THAP2Q9H0W7 228 aa12.31□□□□□ -0.44
CLN6-217ENST00000636964 PMM2O15305 246 aa12.31□□□□□ -0.44
CLN6-217ENST00000636964 VTNP04004 478 aa12.31□□□□□ -0.44
CLN6-217ENST00000636964 IQCF3P0C7M6 154 aa12.31□□□□□ -0.44
CLN6-217ENST00000636964 PIK3CAP42336 1068 aa12.31□□□□□ -0.44
CLN6-217ENST00000636964 ACVR2BQ13705 512 aa12.31□□□□□ -0.44
CLN6-217ENST00000636964 SND1Q7KZF4 910 aaKnown RBP eCLIP12.31□□□□□ -0.447e-7■□□□□ 8.6
CLN6-217ENST00000636964 FAM71AQ8IYT1 594 aa12.31□□□□□ -0.44
CLN6-217ENST00000636964 KIRREL3Q8IZU9 778 aa12.31□□□□□ -0.44
CLN6-217ENST00000636964 ABRAQ8N0Z2 381 aa12.31□□□□□ -0.44
CLN6-217ENST00000636964 LENG1Q96BZ8 264 aaPredicted RBP12.31□□□□□ -0.44
CLN6-217ENST00000636964 ARHGEF26Q96DR7 871 aa12.31□□□□□ -0.44
CLN6-217ENST00000636964 PCDHB18PQ96TA0 734 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms