RNA–Protein interactions for RNA: ENST00000636898.1

CHRNA7-221, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,057 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-221ENST00000636898 TRAIPQ9BWF2 469 aa17.12■□□□□ 0.33
CHRNA7-221ENST00000636898 DCLK3Q9C098 648 aa17.12■□□□□ 0.33
CHRNA7-221ENST00000636898 CHST7Q9NS84 486 aa17.12■□□□□ 0.33
CHRNA7-221ENST00000636898 RIPK3Q9Y572 518 aa17.12■□□□□ 0.33
CHRNA7-221ENST00000636898 TCEA3O75764 348 aa17.12■□□□□ 0.33
CHRNA7-221ENST00000636898 C4BPAP04003 597 aaKnown RBP17.12■□□□□ 0.33
CHRNA7-221ENST00000636898 SLCO1A2P46721 670 aa17.12■□□□□ 0.33
CHRNA7-221ENST00000636898 LIG4P49917 911 aa17.12■□□□□ 0.33
CHRNA7-221ENST00000636898 ZNF280AP59817 542 aaPredicted RBP17.12■□□□□ 0.33
CHRNA7-221ENST00000636898 PRKCEQ02156 737 aa17.12■□□□□ 0.33
CHRNA7-221ENST00000636898 KLF1Q13351 362 aaPredicted RBP17.12■□□□□ 0.33
CHRNA7-221ENST00000636898 CIAPIN1Q6FI81 312 aa17.12■□□□□ 0.33
CHRNA7-221ENST00000636898 REPS2Q8NFH8 660 aa17.12■□□□□ 0.33
CHRNA7-221ENST00000636898 CPA5Q8WXQ8 436 aa17.12■□□□□ 0.33
CHRNA7-221ENST00000636898 POLR3FQ9H1D9 316 aaPredicted RBP17.12■□□□□ 0.33
CHRNA7-221ENST00000636898 SLC9A2Q9UBY0 812 aa17.12■□□□□ 0.33
CHRNA7-221ENST00000636898 SEPT9Q9UHD8 586 aaPredicted RBP17.12■□□□□ 0.33
CHRNA7-221ENST00000636898 SORBS3O60504 671 aa17.11■□□□□ 0.33
CHRNA7-221ENST00000636898 RGS20O76081 388 aa17.11■□□□□ 0.33
CHRNA7-221ENST00000636898 TTC4O95801 387 aa17.11■□□□□ 0.33
CHRNA7-221ENST00000636898 HLA-DRAP01903 254 aa17.11■□□□□ 0.33
CHRNA7-221ENST00000636898 SCTRP47872 440 aa17.11■□□□□ 0.33
CHRNA7-221ENST00000636898 CNGA2Q16280 664 aa17.11■□□□□ 0.33
CHRNA7-221ENST00000636898 XKR3Q5GH77 459 aa17.11■□□□□ 0.33
CHRNA7-221ENST00000636898 LIN9Q5TKA1 542 aa17.11■□□□□ 0.33
CHRNA7-221ENST00000636898 ABHD15Q6UXT9 468 aa17.11■□□□□ 0.33
CHRNA7-221ENST00000636898 EXOC3L1Q86VI1 746 aa17.11■□□□□ 0.33
CHRNA7-221ENST00000636898 CCDC60Q8IWA6 550 aaPredicted RBP17.11■□□□□ 0.33
CHRNA7-221ENST00000636898 UHMK1Q8TAS1 419 aaKnown RBP17.11■□□□□ 0.33
CHRNA7-221ENST00000636898 PRMT1Q99873 361 aaKnown RBP17.11■□□□□ 0.33
CHRNA7-221ENST00000636898 TRIM7Q9C029 511 aa17.11■□□□□ 0.33
CHRNA7-221ENST00000636898 MAF1Q9H063 256 aa17.11■□□□□ 0.33
CHRNA7-221ENST00000636898 NSRP1Q9H0G5 558 aaKnown RBP17.11■□□□□ 0.33
CHRNA7-221ENST00000636898 MRPL47Q9HD33 250 aaKnown RBP17.11■□□□□ 0.33
CHRNA7-221ENST00000636898 DOCK1Q14185 1865 aa17.11■□□□□ 0.33
CHRNA7-221ENST00000636898 RLFQ13129 1914 aa17.11■□□□□ 0.33
CHRNA7-221ENST00000636898 COL11A1P12107 1806 aaPredicted RBP17.11■□□□□ 0.33
CHRNA7-221ENST00000636898 CCT8L1PA6NM43 557 aa17.11■□□□□ 0.33
CHRNA7-221ENST00000636898 PIGRP01833 764 aa17.11■□□□□ 0.33
CHRNA7-221ENST00000636898 ATF2P15336 505 aa17.11■□□□□ 0.33
CHRNA7-221ENST00000636898 ACO1P21399 889 aaKnown RBP17.11■□□□□ 0.33
CHRNA7-221ENST00000636898 PIK3CAP42336 1068 aa17.11■□□□□ 0.33
CHRNA7-221ENST00000636898 GTF2A1P52655 376 aaPredicted RBP17.11■□□□□ 0.33
CHRNA7-221ENST00000636898 BACE1P56817 501 aa17.11■□□□□ 0.33
CHRNA7-221ENST00000636898 ACTR2P61160 394 aa17.11■□□□□ 0.33
CHRNA7-221ENST00000636898 SNX1Q13596 522 aa17.11■□□□□ 0.33
CHRNA7-221ENST00000636898 TDRD10Q5VZ19 366 aaKnown RBP17.11■□□□□ 0.33
CHRNA7-221ENST00000636898 RHOT1Q8IXI2 618 aa17.11■□□□□ 0.33
CHRNA7-221ENST00000636898 BBOF1Q8ND07 529 aa17.11■□□□□ 0.33
CHRNA7-221ENST00000636898 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.11■□□□□ 0.33
CHRNA7-221ENST00000636898 ELMO3Q96BJ8 720 aa17.11■□□□□ 0.33
CHRNA7-221ENST00000636898 WNK4Q96J92 1243 aa17.11■□□□□ 0.33
CHRNA7-221ENST00000636898 JPH2Q9BR39 696 aaPredicted RBP17.11■□□□□ 0.33
CHRNA7-221ENST00000636898 DDX23Q9BUQ8 820 aaKnown RBP17.11■□□□□ 0.33
CHRNA7-221ENST00000636898 SLC40A1Q9NP59 571 aa17.11■□□□□ 0.33
CHRNA7-221ENST00000636898 KLC4Q9NSK0 619 aa17.11■□□□□ 0.33
CHRNA7-221ENST00000636898 SAMD15Q9P1V8 674 aa17.11■□□□□ 0.33
CHRNA7-221ENST00000636898 NEU2Q9Y3R4 380 aa17.11■□□□□ 0.33
CHRNA7-221ENST00000636898 UMODL1Q5DID0 1318 aa17.11■□□□□ 0.33
CHRNA7-221ENST00000636898 POTEJP0CG39 1038 aa17.1■□□□□ 0.33
CHRNA7-221ENST00000636898 DPEP1P16444 411 aa17.1■□□□□ 0.33
CHRNA7-221ENST00000636898 TNNI1P19237 187 aa17.1■□□□□ 0.33
CHRNA7-221ENST00000636898 STRN3Q13033 797 aa17.1■□□□□ 0.33
CHRNA7-221ENST00000636898 CCNG2Q16589 344 aa17.1■□□□□ 0.33
CHRNA7-221ENST00000636898 SPRED3Q2MJR0 410 aa17.1■□□□□ 0.33
CHRNA7-221ENST00000636898 SNRNP48Q6IEG0 339 aaKnown RBP17.1■□□□□ 0.33
CHRNA7-221ENST00000636898 MIS18BP1Q6P0N0 1132 aa17.1■□□□□ 0.33
CHRNA7-221ENST00000636898 RELL1Q8IUW5 271 aa17.1■□□□□ 0.33
CHRNA7-221ENST00000636898 KATNAL2Q8IYT4 538 aa17.1■□□□□ 0.33
CHRNA7-221ENST00000636898 LRRC34Q8IZ02 419 aa17.1■□□□□ 0.33
CHRNA7-221ENST00000636898 AGO2Q9UKV8 859 aaKnown RBP17.1■□□□□ 0.33
CHRNA7-221ENST00000636898 ADAMTS5Q9UNA0 930 aa17.1■□□□□ 0.33
CHRNA7-221ENST00000636898 SCAF8Q9UPN6 1271 aaKnown RBP17.1■□□□□ 0.33
CHRNA7-221ENST00000636898 CNTN6Q9UQ52 1028 aa17.1■□□□□ 0.33
CHRNA7-221ENST00000636898 MYH9P35579 1960 aaKnown RBP17.1■□□□□ 0.33
CHRNA7-221ENST00000636898 DNAJC8O75937 253 aaPredicted RBP17.09■□□□□ 0.33
CHRNA7-221ENST00000636898 ACSL3O95573 720 aa17.09■□□□□ 0.33
CHRNA7-221ENST00000636898 MNAT1P51948 309 aa17.09■□□□□ 0.33
CHRNA7-221ENST00000636898 ITGA8P53708 1063 aa17.09■□□□□ 0.33
CHRNA7-221ENST00000636898 XRCC4Q13426 336 aa17.09■□□□□ 0.33
CHRNA7-221ENST00000636898 CUL2Q13617 745 aa17.09■□□□□ 0.33
CHRNA7-221ENST00000636898 GNPTABQ3T906 1256 aa17.09■□□□□ 0.33
CHRNA7-221ENST00000636898 SLFN12LQ6IEE8 588 aa17.09■□□□□ 0.33
CHRNA7-221ENST00000636898 PHF13Q86YI8 300 aaPredicted RBP17.09■□□□□ 0.33
CHRNA7-221ENST00000636898 ABRAQ8N0Z2 381 aa17.09■□□□□ 0.33
CHRNA7-221ENST00000636898 CCDC89Q8N998 374 aa17.09■□□□□ 0.33
CHRNA7-221ENST00000636898 IPO4Q8TEX9 1081 aaKnown RBP17.09■□□□□ 0.33
CHRNA7-221ENST00000636898 ATG4AQ8WYN0 398 aa17.09■□□□□ 0.33
CHRNA7-221ENST00000636898 HERPUD2Q9BSE4 406 aa17.09■□□□□ 0.33
CHRNA7-221ENST00000636898 A1CFQ9NQ94 594 aaKnown RBP17.09■□□□□ 0.33
CHRNA7-221ENST00000636898 SCINQ9Y6U3 715 aa17.09■□□□□ 0.33
CHRNA7-221ENST00000636898 SIP14410 1827 aa17.09■□□□□ 0.33
CHRNA7-221ENST00000636898 PHIPQ8WWQ0 1821 aa17.09■□□□□ 0.33
CHRNA7-221ENST00000636898 DOCK5Q9H7D0 1870 aa17.09■□□□□ 0.33
CHRNA7-221ENST00000636898 SPATA31C2B4DYI2 1134 aa17.09■□□□□ 0.33
CHRNA7-221ENST00000636898 ATP2A1O14983 1001 aa17.09■□□□□ 0.33
CHRNA7-221ENST00000636898 LDHAP00338 332 aaKnown RBP17.09■□□□□ 0.33
CHRNA7-221ENST00000636898 CALCAP01258 141 aa17.09■□□□□ 0.33
CHRNA7-221ENST00000636898 GSTA1P08263 222 aa17.09■□□□□ 0.33
CHRNA7-221ENST00000636898 CHKAP35790 457 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms