RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 SYN3O14994 580 aa19.55■□□□□ 0.72
PNKP-225ENST00000636214 ADAM12O43184 909 aa19.55■□□□□ 0.72
PNKP-225ENST00000636214 XPOTO43592 962 aaKnown RBP19.55■□□□□ 0.72
PNKP-225ENST00000636214 CLTAP09496 248 aa19.55■□□□□ 0.72
PNKP-225ENST00000636214 PPP2R3AQ06190 1150 aa19.55■□□□□ 0.72
PNKP-225ENST00000636214 ARSHQ5FYA8 562 aa19.55■□□□□ 0.72
PNKP-225ENST00000636214 RTL10Q7L3V2 364 aa19.55■□□□□ 0.72
PNKP-225ENST00000636214 GRASPQ7Z6J2 395 aaPredicted RBP19.55■□□□□ 0.72
PNKP-225ENST00000636214 KRI1Q8N9T8 703 aaKnown RBP19.55■□□□□ 0.72
PNKP-225ENST00000636214 C3orf58Q8NDZ4 430 aa19.55■□□□□ 0.72
PNKP-225ENST00000636214 APPL2Q8NEU8 664 aa19.55■□□□□ 0.72
PNKP-225ENST00000636214 KIF12Q96FN5 646 aa19.55■□□□□ 0.72
PNKP-225ENST00000636214 DOCK6Q96HP0 2047 aa19.55■□□□□ 0.72
PNKP-225ENST00000636214 ZMAT2Q96NC0 199 aaKnown RBP19.55■□□□□ 0.72
PNKP-225ENST00000636214 PLEKHA5Q9HAU0 1116 aa19.55■□□□□ 0.72
PNKP-225ENST00000636214 TRAK2O60296 914 aa19.54■□□□□ 0.72
PNKP-225ENST00000636214 CXCL8P10145 99 aa19.54■□□□□ 0.72
PNKP-225ENST00000636214 LAMP2P13473 410 aa19.54■□□□□ 0.72
PNKP-225ENST00000636214 MARCKSP29966 332 aaPredicted RBP19.54■□□□□ 0.72
PNKP-225ENST00000636214 MRE11P49959 708 aa19.54■□□□□ 0.72
PNKP-225ENST00000636214 ARPP19P56211 112 aa19.54■□□□□ 0.72
PNKP-225ENST00000636214 SEZ6Q53EL9 994 aa19.54■□□□□ 0.72
PNKP-225ENST00000636214 VARS2Q5ST30 1063 aaKnown RBP19.54■□□□□ 0.72
PNKP-225ENST00000636214 C18orf25Q96B23 403 aaPredicted RBP19.54■□□□□ 0.72
PNKP-225ENST00000636214 TBX20Q9UMR3 447 aa19.54■□□□□ 0.72
PNKP-225ENST00000636214 PDCD11Q14690 1871 aaKnown RBP19.54■□□□□ 0.72
PNKP-225ENST00000636214 PRRG1O14668 218 aa19.53■□□□□ 0.72
PNKP-225ENST00000636214 LRG1P02750 347 aa19.53■□□□□ 0.72
PNKP-225ENST00000636214 SLC10A6Q3KNW5 377 aa19.53■□□□□ 0.72
PNKP-225ENST00000636214 ZNF280DQ6N043 979 aa19.53■□□□□ 0.72
PNKP-225ENST00000636214 SIX5Q8N196 739 aa19.53■□□□□ 0.72
PNKP-225ENST00000636214 RSAD2Q8WXG1 361 aa19.53■□□□□ 0.72
PNKP-225ENST00000636214 ATOH1Q92858 354 aaPredicted RBP19.53■□□□□ 0.72
PNKP-225ENST00000636214 MSTO1Q9BUK6 570 aa19.53■□□□□ 0.72
PNKP-225ENST00000636214 CCSER1Q9C0I3 900 aa19.53■□□□□ 0.72
PNKP-225ENST00000636214 RPF1Q9H9Y2 349 aaKnown RBP19.53■□□□□ 0.72
PNKP-225ENST00000636214 BLOC1S4Q9NUP1 217 aa19.53■□□□□ 0.72
PNKP-225ENST00000636214 UBQLN1Q9UMX0 589 aaKnown RBP19.53■□□□□ 0.72
PNKP-225ENST00000636214 GALR2O43603 387 aaPredicted RBP19.52■□□□□ 0.72
PNKP-225ENST00000636214 CFHP08603 1231 aa19.52■□□□□ 0.72
PNKP-225ENST00000636214 POU2F2P09086 479 aa19.52■□□□□ 0.72
PNKP-225ENST00000636214 SRFP11831 508 aa19.52■□□□□ 0.72
PNKP-225ENST00000636214 CLCN5P51795 746 aa19.52■□□□□ 0.72
PNKP-225ENST00000636214 ZNF131P52739 623 aa19.52■□□□□ 0.72
PNKP-225ENST00000636214 GRIN1Q05586 938 aa19.52■□□□□ 0.72
PNKP-225ENST00000636214 TCF15Q12870 199 aa19.52■□□□□ 0.72
PNKP-225ENST00000636214 CTXN3Q4LDR2 81 aa19.52■□□□□ 0.72
PNKP-225ENST00000636214 PABPC1LQ4VXU2 614 aaKnown RBP19.52■□□□□ 0.72
PNKP-225ENST00000636214 CD300LGQ6UXG3 332 aa19.52■□□□□ 0.72
PNKP-225ENST00000636214 MTSS1LQ765P7 747 aa19.52■□□□□ 0.72
PNKP-225ENST00000636214 INTS4Q96HW7 963 aaKnown RBP19.52■□□□□ 0.72
PNKP-225ENST00000636214 STK17AQ9UEE5 414 aa19.52■□□□□ 0.72
PNKP-225ENST00000636214 CDH7Q9ULB5 785 aa19.52■□□□□ 0.72
PNKP-225ENST00000636214 CLIC4Q9Y696 253 aa19.52■□□□□ 0.72
PNKP-225ENST00000636214 OGTO15294 1046 aa19.51■□□□□ 0.71
PNKP-225ENST00000636214 NARSO43776 548 aaKnown RBP19.51■□□□□ 0.71
PNKP-225ENST00000636214 SYT1P21579 422 aa19.51■□□□□ 0.71
PNKP-225ENST00000636214 IGFBP6P24592 240 aaPredicted RBP19.51■□□□□ 0.71
PNKP-225ENST00000636214 DDIT3P35638 169 aa19.51■□□□□ 0.71
PNKP-225ENST00000636214 NTHL1P78549 312 aa19.51■□□□□ 0.71
PNKP-225ENST00000636214 ROR1Q01973 937 aa19.51■□□□□ 0.71
PNKP-225ENST00000636214 CEBPZQ03701 1054 aaKnown RBP19.51■□□□□ 0.71
PNKP-225ENST00000636214 SLC8B1Q6J4K2 584 aa19.51■□□□□ 0.71
PNKP-225ENST00000636214 RSPO2Q6UXX9 243 aaPredicted RBP19.51■□□□□ 0.71
PNKP-225ENST00000636214 ELMOD1Q8N336 334 aa19.51■□□□□ 0.71
PNKP-225ENST00000636214 SLC44A3Q8N4M1 653 aa19.51■□□□□ 0.71
PNKP-225ENST00000636214 ZNF461Q8TAF7 563 aa19.51■□□□□ 0.71
PNKP-225ENST00000636214 KCNN1Q92952 543 aa19.51■□□□□ 0.71
PNKP-225ENST00000636214 FAM212AQ96EL1 285 aa19.51■□□□□ 0.71
PNKP-225ENST00000636214 SUSD3Q96L08 255 aa19.51■□□□□ 0.71
PNKP-225ENST00000636214 RTP3Q9BQQ7 232 aa19.51■□□□□ 0.71
PNKP-225ENST00000636214 WNT16Q9UBV4 365 aa19.51■□□□□ 0.71
PNKP-225ENST00000636214 TUBGCP4Q9UGJ1 667 aa19.51■□□□□ 0.71
PNKP-225ENST00000636214 PIGRP01833 764 aa19.5■□□□□ 0.71
PNKP-225ENST00000636214 HTR4Q13639 388 aa19.5■□□□□ 0.71
PNKP-225ENST00000636214 SPECC1Q5M775 1068 aa19.5■□□□□ 0.71
PNKP-225ENST00000636214 RRAGBQ5VZM2 374 aa19.5■□□□□ 0.71
PNKP-225ENST00000636214 TPGS2Q68CL5 300 aa19.5■□□□□ 0.71
PNKP-225ENST00000636214 USP37Q86T82 979 aa19.5■□□□□ 0.71
PNKP-225ENST00000636214 CD302Q8IX05 232 aa19.5■□□□□ 0.71
PNKP-225ENST00000636214 TMEM105Q8N8V8 129 aa19.5■□□□□ 0.71
PNKP-225ENST00000636214 EPSTI1Q96J88 318 aa19.5■□□□□ 0.71
PNKP-225ENST00000636214 TSPAN18Q96SJ8 248 aa19.5■□□□□ 0.71
PNKP-225ENST00000636214 BACH2Q9BYV9 841 aa19.5■□□□□ 0.71
PNKP-225ENST00000636214 CYP4F11Q9HBI6 524 aa19.5■□□□□ 0.71
PNKP-225ENST00000636214 FOXD4L1Q9NU39 408 aa19.5■□□□□ 0.71
PNKP-225ENST00000636214 FBXL5Q9UKA1 691 aa19.5■□□□□ 0.71
PNKP-225ENST00000636214 KCNH3Q9ULD8 1083 aa19.5■□□□□ 0.71
PNKP-225ENST00000636214 PCDHB8Q9UN66 801 aa19.5■□□□□ 0.71
PNKP-225ENST00000636214 MRPS23Q9Y3D9 190 aaKnown RBP19.5■□□□□ 0.71
PNKP-225ENST00000636214 NUMBLQ9Y6R0 609 aa19.5■□□□□ 0.71
PNKP-225ENST00000636214 TTC26A0AVF1 554 aa19.49■□□□□ 0.71
PNKP-225ENST00000636214 CPB1P15086 417 aa19.49■□□□□ 0.71
PNKP-225ENST00000636214 ATF2P15336 505 aa19.49■□□□□ 0.71
PNKP-225ENST00000636214 CYP3A5P20815 502 aa19.49■□□□□ 0.71
PNKP-225ENST00000636214 TNFSF9P41273 254 aa19.49■□□□□ 0.71
PNKP-225ENST00000636214 SPAG1Q07617 926 aa19.49■□□□□ 0.71
PNKP-225ENST00000636214 RESTQ13127 1097 aa19.49■□□□□ 0.71
PNKP-225ENST00000636214 DSTYKQ6XUX3 929 aa19.49■□□□□ 0.71
PNKP-225ENST00000636214 SV2BQ7L1I2 683 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms