RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 PADI6Q6TGC4 694 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 KDELC2Q7Z4H8 507 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 SYTL1Q8IYJ3 562 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 DPP10Q8N608 796 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 TUBGCP3Q96CW5 907 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 STAMBPL1Q96FJ0 436 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 BHMT2Q9H2M3 363 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 ZNF304Q9HCX3 659 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 ZFATQ9P243 1243 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 GABBR1Q9UBS5 961 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 PCSK1NQ9UHG2 260 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 LNPEPQ9UIQ6 1025 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 ECE2O60344 883 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 CHGBP05060 677 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 RRM2P31350 389 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 ALDH18A1P54886 795 aaKnown RBP5.83□□□□□ -1.48
SCN1A-209ENST00000635750 CDH6P55285 790 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 ZNF445P59923 1031 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 DYNLL1P63167 89 aaKnown RBP5.83□□□□□ -1.48
SCN1A-209ENST00000635750 SKP1P63208 163 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 PTPAQ15257 358 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 TOMM20Q15388 145 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 ZCCHC8Q6NZY4 707 aaKnown RBP5.83□□□□□ -1.48
SCN1A-209ENST00000635750 TMED8Q6PL24 325 aaPredicted RBP5.83□□□□□ -1.48
SCN1A-209ENST00000635750 APOA5Q6Q788 366 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 PHACTR4Q8IZ21 702 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 KRT35Q92764 455 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 BBS2Q9BXC9 721 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 EMILIN2Q9BXX0 1053 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 RNF146Q9NTX7 359 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 THG1LQ9NWX6 298 aaKnown RBP5.83□□□□□ -1.48
SCN1A-209ENST00000635750 SAE1Q9UBE0 346 aaPredicted RBP5.83□□□□□ -1.48
SCN1A-209ENST00000635750 PCDHA7Q9UN72 937 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 MAST1Q9Y2H9 1570 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 HEATR9A2RTY3 570 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 SFI1A8K8P3 1242 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 RPS6KA5O75582 802 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 HMBSP08397 361 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 C6orf222P0C671 652 aaPredicted RBP5.83□□□□□ -1.48
SCN1A-209ENST00000635750 PRIM2P49643 509 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 ACTR2P61160 394 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 ETF1P62495 437 aaKnown RBP5.83□□□□□ -1.48
SCN1A-209ENST00000635750 ZBED6P86452 979 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 STILQ15468 1287 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 EFL1Q7Z2Z2 1120 aaKnown RBP5.83□□□□□ -1.48
SCN1A-209ENST00000635750 SPIRE2Q8WWL2 714 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 USP28Q96RU2 1077 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 ADGBQ8N7X0 1667 aa5.82□□□□□ -1.48
SCN1A-209ENST00000635750 ZBTB5O15062 677 aa5.82□□□□□ -1.48
SCN1A-209ENST00000635750 GGPS1O95749 300 aa5.82□□□□□ -1.48
SCN1A-209ENST00000635750 MMP1P03956 469 aa5.82□□□□□ -1.48
SCN1A-209ENST00000635750 PCSK1P29120 753 aa5.82□□□□□ -1.48
SCN1A-209ENST00000635750 CDC16Q13042 620 aa5.82□□□□□ -1.48
SCN1A-209ENST00000635750 ARL6IP4Q66PJ3 421 aaKnown RBP5.82□□□□□ -1.48
SCN1A-209ENST00000635750 SPATA18Q8TC71 538 aa5.82□□□□□ -1.48
SCN1A-209ENST00000635750 DTNBP1Q96EV8 351 aa5.82□□□□□ -1.48
SCN1A-209ENST00000635750 PRRG3Q9BZD7 231 aa5.82□□□□□ -1.48
SCN1A-209ENST00000635750 IMPAD1Q9NX62 359 aa5.82□□□□□ -1.48
SCN1A-209ENST00000635750 DNAJC12Q9UKB3 198 aa5.82□□□□□ -1.48
SCN1A-209ENST00000635750 KCNN4O15554 427 aa5.82□□□□□ -1.48
SCN1A-209ENST00000635750 MTRF1O75570 445 aaKnown RBP5.82□□□□□ -1.48
SCN1A-209ENST00000635750 ITGAXP20702 1163 aa5.82□□□□□ -1.48
SCN1A-209ENST00000635750 MMRN1Q13201 1228 aa5.82□□□□□ -1.48
SCN1A-209ENST00000635750 ZRANB3Q5FWF4 1079 aa5.82□□□□□ -1.48
SCN1A-209ENST00000635750 ATXN7L3BQ96GX2 97 aa5.82□□□□□ -1.48
SCN1A-209ENST00000635750 CNBD2Q96M20 576 aa5.82□□□□□ -1.48
SCN1A-209ENST00000635750 YME1L1Q96TA2 773 aa5.82□□□□□ -1.48
SCN1A-209ENST00000635750 NDST4Q9H3R1 872 aa5.82□□□□□ -1.48
SCN1A-209ENST00000635750 ERAP1Q9NZ08 941 aa5.82□□□□□ -1.48
SCN1A-209ENST00000635750 STOML1Q9UBI4 398 aa5.82□□□□□ -1.48
SCN1A-209ENST00000635750 PRPF3O43395 683 aaKnown RBP5.82□□□□□ -1.48
SCN1A-209ENST00000635750 CAPN1P07384 714 aa5.82□□□□□ -1.48
SCN1A-209ENST00000635750 RFX3P48380 749 aa5.82□□□□□ -1.48
SCN1A-209ENST00000635750 FCGRTP55899 365 aa5.82□□□□□ -1.48
SCN1A-209ENST00000635750 TSC22D1Q15714 1073 aa5.82□□□□□ -1.48
SCN1A-209ENST00000635750 CYP4Z1Q86W10 505 aa5.82□□□□□ -1.48
SCN1A-209ENST00000635750 NLRP10Q86W26 655 aa5.82□□□□□ -1.48
SCN1A-209ENST00000635750 RHOT1Q8IXI2 618 aa5.82□□□□□ -1.48
SCN1A-209ENST00000635750 GPD1LQ8N335 351 aa5.82□□□□□ -1.48
SCN1A-209ENST00000635750 DDI1Q8WTU0 396 aa5.82□□□□□ -1.48
SCN1A-209ENST00000635750 RSPH1Q8WYR4 309 aa5.82□□□□□ -1.48
SCN1A-209ENST00000635750 CMTM5Q96DZ9 223 aa5.82□□□□□ -1.48
SCN1A-209ENST00000635750 TMEM169Q96HH4 297 aa5.82□□□□□ -1.48
SCN1A-209ENST00000635750 FAM20AQ96MK3 541 aa5.82□□□□□ -1.48
SCN1A-209ENST00000635750 CCT7Q99832 543 aa5.82□□□□□ -1.48
SCN1A-209ENST00000635750 COLEC11Q9BWP8 271 aa5.82□□□□□ -1.48
SCN1A-209ENST00000635750 ZSWIM6Q9HCJ5 1215 aa5.82□□□□□ -1.48
SCN1A-209ENST00000635750 NOP53Q9NZM5 478 aaKnown RBP5.82□□□□□ -1.48
SCN1A-209ENST00000635750 RPAP1Q9BWH6 1393 aaPredicted RBP5.82□□□□□ -1.48
SCN1A-209ENST00000635750 HNRNPCP07910 306 aaKnown RBP eCLIP5.82□□□□□ -1.48
SCN1A-209ENST00000635750 CYP19A1P11511 503 aaPredicted RBP5.82□□□□□ -1.48
SCN1A-209ENST00000635750 GPC1P35052 558 aa5.82□□□□□ -1.48
SCN1A-209ENST00000635750 SOX6P35712 828 aa5.82□□□□□ -1.48
SCN1A-209ENST00000635750 SLC25A24Q6NUK1 477 aa5.82□□□□□ -1.48
SCN1A-209ENST00000635750 ALKBH5Q6P6C2 394 aaKnown RBP5.82□□□□□ -1.48
SCN1A-209ENST00000635750 ZNF564Q8TBZ8 553 aaPredicted RBP5.82□□□□□ -1.48
SCN1A-209ENST00000635750 SNF8Q96H20 258 aa5.82□□□□□ -1.48
SCN1A-209ENST00000635750 CINPQ9BW66 212 aaPredicted RBP5.82□□□□□ -1.48
SCN1A-209ENST00000635750 SPON1Q9HCB6 807 aa5.82□□□□□ -1.48
SCN1A-209ENST00000635750 ABI2Q9NYB9 513 aaPredicted RBP5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms