RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 RHOBTB3O94955 611 aa3.43□□□□□ -1.86
PSPC1-208ENST00000635562 POU2F2P09086 479 aa3.43□□□□□ -1.86
PSPC1-208ENST00000635562 SLC5A1P13866 664 aa3.43□□□□□ -1.86
PSPC1-208ENST00000635562 TNFAIP3P21580 790 aa3.43□□□□□ -1.86
PSPC1-208ENST00000635562 EDNRBP24530 442 aa3.43□□□□□ -1.86
PSPC1-208ENST00000635562 SERPINB3P29508 390 aa3.43□□□□□ -1.86
PSPC1-208ENST00000635562 CYP2C19P33261 490 aa3.43□□□□□ -1.86
PSPC1-208ENST00000635562 RPS19P39019 145 aaKnown RBP3.43□□□□□ -1.86
PSPC1-208ENST00000635562 RXRGP48443 463 aa3.43□□□□□ -1.86
PSPC1-208ENST00000635562 NEK3P51956 506 aa3.43□□□□□ -1.86
PSPC1-208ENST00000635562 ZNF131P52739 623 aa3.43□□□□□ -1.86
PSPC1-208ENST00000635562 INHBCP55103 352 aa3.43□□□□□ -1.86
PSPC1-208ENST00000635562 CDK17Q00537 523 aa3.43□□□□□ -1.86
PSPC1-208ENST00000635562 MAP2K1Q02750 393 aaPredicted RBP3.43□□□□□ -1.86
PSPC1-208ENST00000635562 PPP3CAQ08209 521 aa3.43□□□□□ -1.86
PSPC1-208ENST00000635562 MAP3K12Q12852 859 aa3.43□□□□□ -1.86
PSPC1-208ENST00000635562 MALLQ13021 153 aa3.43□□□□□ -1.86
PSPC1-208ENST00000635562 PICALMQ13492 652 aa3.43□□□□□ -1.86
PSPC1-208ENST00000635562 GTF2H3Q13889 308 aa3.43□□□□□ -1.86
PSPC1-208ENST00000635562 CLUL1Q15846 466 aa3.43□□□□□ -1.86
PSPC1-208ENST00000635562 WDR72Q3MJ13 1102 aa3.43□□□□□ -1.86
PSPC1-208ENST00000635562 USP39Q53GS9 565 aaKnown RBP3.43□□□□□ -1.86
PSPC1-208ENST00000635562 KIAA1614Q5VZ46 1190 aa3.43□□□□□ -1.86
PSPC1-208ENST00000635562 JAKMIP3Q5VZ66 844 aa3.43□□□□□ -1.86
PSPC1-208ENST00000635562 BTNL9Q6UXG8 535 aa3.43□□□□□ -1.86
PSPC1-208ENST00000635562 CCDC73Q6ZRK6 1079 aa3.43□□□□□ -1.86
PSPC1-208ENST00000635562 TOGARAM2Q6ZUX3 1019 aa3.43□□□□□ -1.86
PSPC1-208ENST00000635562 TAX1BP1Q86VP1 789 aa3.43□□□□□ -1.86
PSPC1-208ENST00000635562 OR8H2Q8N162 312 aa3.43□□□□□ -1.86
PSPC1-208ENST00000635562 PRR18Q8N4B5 295 aa3.43□□□□□ -1.86
PSPC1-208ENST00000635562 APPL2Q8NEU8 664 aa3.43□□□□□ -1.86
PSPC1-208ENST00000635562 PJA1Q8NG27 643 aa3.43□□□□□ -1.86
PSPC1-208ENST00000635562 FATE1Q969F0 183 aa3.43□□□□□ -1.86
PSPC1-208ENST00000635562 DYDC2Q96IM9 177 aa3.43□□□□□ -1.86
PSPC1-208ENST00000635562 CFAP53Q96M91 514 aa3.43□□□□□ -1.86
PSPC1-208ENST00000635562 ZNF830Q96NB3 372 aaPredicted RBP3.43□□□□□ -1.86
PSPC1-208ENST00000635562 GNRHR2Q96P88 292 aa3.43□□□□□ -1.86
PSPC1-208ENST00000635562 SLC2A13Q96QE2 648 aa3.43□□□□□ -1.86
PSPC1-208ENST00000635562 SARGQ9BW04 601 aa3.43□□□□□ -1.86
PSPC1-208ENST00000635562 XPO4Q9C0E2 1151 aaKnown RBP3.43□□□□□ -1.86
PSPC1-208ENST00000635562 RANBP17Q9H2T7 1088 aaKnown RBP3.43□□□□□ -1.86
PSPC1-208ENST00000635562 ANLNQ9NQW6 1124 aa3.43□□□□□ -1.86
PSPC1-208ENST00000635562 SAE1Q9UBE0 346 aaPredicted RBP3.43□□□□□ -1.86
PSPC1-208ENST00000635562 ING1Q9UK53 422 aaPredicted RBP3.43□□□□□ -1.86
PSPC1-208ENST00000635562 ZBTB21Q9ULJ3 1066 aa3.43□□□□□ -1.86
PSPC1-208ENST00000635562 OAZ3Q9UMX2 235 aa3.43□□□□□ -1.86
PSPC1-208ENST00000635562 VWA7Q9Y334 891 aa3.43□□□□□ -1.86
PSPC1-208ENST00000635562 ANO9A1A5B4 782 aa3.42□□□□□ -1.86
PSPC1-208ENST00000635562 NRP2O60462 931 aa3.42□□□□□ -1.86
PSPC1-208ENST00000635562 LY86O95711 162 aa3.42□□□□□ -1.86
PSPC1-208ENST00000635562 TPM2P07951 284 aa3.42□□□□□ -1.86
PSPC1-208ENST00000635562 NBPF7P0C2Y1 421 aaPredicted RBP3.42□□□□□ -1.86
PSPC1-208ENST00000635562 U2AF1L5P0DN76 240 aaPredicted RBP3.42□□□□□ -1.86
PSPC1-208ENST00000635562 GAAP10253 952 aa3.42□□□□□ -1.86
PSPC1-208ENST00000635562 RPL17P18621 184 aaKnown RBP3.42□□□□□ -1.86
PSPC1-208ENST00000635562 CR2P20023 1033 aa3.42□□□□□ -1.86
PSPC1-208ENST00000635562 CASQ1P31415 396 aa3.42□□□□□ -1.86
PSPC1-208ENST00000635562 ADCY8P40145 1251 aa3.42□□□□□ -1.86
PSPC1-208ENST00000635562 MCAMP43121 646 aa3.42□□□□□ -1.86
PSPC1-208ENST00000635562 RENBPP51606 427 aa3.42□□□□□ -1.86
PSPC1-208ENST00000635562 STAT5BP51692 787 aa3.42□□□□□ -1.86
PSPC1-208ENST00000635562 ZNF280AP59817 542 aaPredicted RBP3.42□□□□□ -1.86
PSPC1-208ENST00000635562 U2AF1Q01081 240 aaKnown RBP eCLIP3.42□□□□□ -1.863e-8■□□□□ 10.5
PSPC1-208ENST00000635562 MEF2AQ02078 507 aaPredicted RBP3.42□□□□□ -1.86
PSPC1-208ENST00000635562 CD69Q07108 199 aa3.42□□□□□ -1.86
PSPC1-208ENST00000635562 IFT88Q13099 833 aa3.42□□□□□ -1.86
PSPC1-208ENST00000635562 TCIRG1Q13488 830 aa3.42□□□□□ -1.86
PSPC1-208ENST00000635562 KIF22Q14807 665 aa3.42□□□□□ -1.86
PSPC1-208ENST00000635562 ACAP2Q15057 778 aa3.42□□□□□ -1.86
PSPC1-208ENST00000635562 LSM12Q3MHD2 195 aaKnown RBP3.42□□□□□ -1.86
PSPC1-208ENST00000635562 DNAJC21Q5F1R6 531 aaKnown RBP3.42□□□□□ -1.86
PSPC1-208ENST00000635562 CCDC158Q5M9N0 1113 aa3.42□□□□□ -1.86
PSPC1-208ENST00000635562 SLC10A5Q5PT55 438 aa3.42□□□□□ -1.86
PSPC1-208ENST00000635562 ATAT1Q5SQI0 421 aa3.42□□□□□ -1.86
PSPC1-208ENST00000635562 CYB5RLQ6IPT4 315 aa3.42□□□□□ -1.86
PSPC1-208ENST00000635562 KLHL10Q6JEL2 608 aa3.42□□□□□ -1.86
PSPC1-208ENST00000635562 LARP4Q71RC2 724 aaKnown RBP eCLIP3.42□□□□□ -1.86
PSPC1-208ENST00000635562 TTC30AQ86WT1 665 aa3.42□□□□□ -1.86
PSPC1-208ENST00000635562 UNC5BQ8IZJ1 945 aa3.42□□□□□ -1.86
PSPC1-208ENST00000635562 THEMISQ8N1K5 641 aaPredicted RBP3.42□□□□□ -1.86
PSPC1-208ENST00000635562 MIGA1Q8NAN2 632 aa3.42□□□□□ -1.86
PSPC1-208ENST00000635562 PIK3C3Q8NEB9 887 aa3.42□□□□□ -1.86
PSPC1-208ENST00000635562 IL17REQ8NFR9 667 aa3.42□□□□□ -1.86
PSPC1-208ENST00000635562 WDR48Q8TAF3 677 aa3.42□□□□□ -1.86
PSPC1-208ENST00000635562 HOXB13Q92826 284 aaPredicted RBP3.42□□□□□ -1.86
PSPC1-208ENST00000635562 CENPTQ96BT3 561 aa3.42□□□□□ -1.86
PSPC1-208ENST00000635562 CHFRQ96EP1 664 aa3.42□□□□□ -1.86
PSPC1-208ENST00000635562 SCLT1Q96NL6 688 aa3.42□□□□□ -1.86
PSPC1-208ENST00000635562 IWS1Q96ST2 819 aa3.42□□□□□ -1.86
PSPC1-208ENST00000635562 MAP3K14Q99558 947 aa3.42□□□□□ -1.86
PSPC1-208ENST00000635562 FAM167BQ9BTA0 163 aa3.42□□□□□ -1.86
PSPC1-208ENST00000635562 ACE2Q9BYF1 805 aaPredicted RBP3.42□□□□□ -1.86
PSPC1-208ENST00000635562 GREM2Q9H772 168 aa3.42□□□□□ -1.86
PSPC1-208ENST00000635562 PLCB1Q9NQ66 1216 aa3.42□□□□□ -1.86
PSPC1-208ENST00000635562 OBP2AQ9NY56 170 aa3.42□□□□□ -1.86
PSPC1-208ENST00000635562 DNAI1Q9UI46 699 aa3.42□□□□□ -1.86
PSPC1-208ENST00000635562 MAGEL2Q9UJ55 1249 aa3.42□□□□□ -1.86
PSPC1-208ENST00000635562 NOB1Q9ULX3 412 aaKnown RBP3.42□□□□□ -1.86
PSPC1-208ENST00000635562 K7ENM7 598 aa3.41□□□□□ -1.86
PSPC1-208ENST00000635562 HTRA2O43464 458 aaPredicted RBP3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms