RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 FAM3CQ92520 227 aa22.17■■□□□ 1.14
TARDBP-228ENST00000629725 TCEAL4Q96EI5 215 aa22.17■■□□□ 1.14
TARDBP-228ENST00000629725 CCDC113Q9H0I3 377 aa22.17■■□□□ 1.14
TARDBP-228ENST00000629725 LMAN1LQ9HAT1 526 aa22.17■■□□□ 1.14
TARDBP-228ENST00000629725 BRMS1Q9HCU9 246 aa22.17■■□□□ 1.14
TARDBP-228ENST00000629725 WDR27A2RRH5 827 aa22.16■■□□□ 1.14
TARDBP-228ENST00000629725 I3L4J1 428 aa22.16■■□□□ 1.14
TARDBP-228ENST00000629725 ZNF197O14709 1029 aa22.16■■□□□ 1.14
TARDBP-228ENST00000629725 LRP3O75074 770 aa22.16■■□□□ 1.14
TARDBP-228ENST00000629725 MICAL2O94851 1124 aa22.16■■□□□ 1.14
TARDBP-228ENST00000629725 ABLIM3O94929 683 aa22.16■■□□□ 1.14
TARDBP-228ENST00000629725 RETP07949 1114 aa22.16■■□□□ 1.14
TARDBP-228ENST00000629725 SPATA31C1P0DKV0 1188 aa22.16■■□□□ 1.14
TARDBP-228ENST00000629725 BRCC3P46736 316 aa22.16■■□□□ 1.14
TARDBP-228ENST00000629725 PPM1JQ5JR12 505 aa22.16■■□□□ 1.14
TARDBP-228ENST00000629725 EEF1DP3Q658K8 133 aa22.16■■□□□ 1.14
TARDBP-228ENST00000629725 C3orf58Q8NDZ4 430 aa22.16■■□□□ 1.14
TARDBP-228ENST00000629725 BSNDQ8WZ55 320 aa22.16■■□□□ 1.14
TARDBP-228ENST00000629725 WASF1Q92558 559 aa22.16■■□□□ 1.14
TARDBP-228ENST00000629725 TNFRSF25Q93038 417 aa22.16■■□□□ 1.14
TARDBP-228ENST00000629725 ASB16Q96NS5 453 aa22.16■■□□□ 1.14
TARDBP-228ENST00000629725 GOLGA2P5Q9HBQ8 144 aa22.16■■□□□ 1.14
TARDBP-228ENST00000629725 ZNF334Q9HCZ1 680 aaPredicted RBP22.16■■□□□ 1.14
TARDBP-228ENST00000629725 TRPV5Q9NQA5 729 aa22.16■■□□□ 1.14
TARDBP-228ENST00000629725 DAXXQ9UER7 740 aaPredicted RBP22.16■■□□□ 1.14
TARDBP-228ENST00000629725 LOC105378220A0A1B0GUY1 285 aaPredicted RBP22.15■■□□□ 1.14
TARDBP-228ENST00000629725 SLC30A4O14863 429 aa22.15■■□□□ 1.14
TARDBP-228ENST00000629725 EPB41L2O43491 1005 aaKnown RBP22.15■■□□□ 1.14
TARDBP-228ENST00000629725 EDN1P05305 212 aa22.15■■□□□ 1.14
TARDBP-228ENST00000629725 ATF2P15336 505 aa22.15■■□□□ 1.14
TARDBP-228ENST00000629725 PSMC3P17980 439 aa22.15■■□□□ 1.14
TARDBP-228ENST00000629725 NAMPTP43490 491 aa22.15■■□□□ 1.14
TARDBP-228ENST00000629725 PDZD4Q76G19 769 aaPredicted RBP22.15■■□□□ 1.14
TARDBP-228ENST00000629725 CATSPER3Q86XQ3 398 aa22.15■■□□□ 1.14
TARDBP-228ENST00000629725 MAP4K3Q8IVH8 894 aa22.15■■□□□ 1.14
TARDBP-228ENST00000629725 DEPTORQ8TB45 409 aa22.15■■□□□ 1.14
TARDBP-228ENST00000629725 MTMR9Q96QG7 549 aa22.15■■□□□ 1.14
TARDBP-228ENST00000629725 CYP4F11Q9HBI6 524 aa22.15■■□□□ 1.14
TARDBP-228ENST00000629725 ORC3Q9UBD5 711 aaPredicted RBP22.15■■□□□ 1.14
TARDBP-228ENST00000629725 PIAS3Q9Y6X2 628 aa22.15■■□□□ 1.14
TARDBP-228ENST00000629725 PDCD11Q14690 1871 aaKnown RBP22.14■■□□□ 1.13
TARDBP-228ENST00000629725 GDI1P31150 447 aa22.14■■□□□ 1.13
TARDBP-228ENST00000629725 TCEAL8Q8IYN2 117 aa22.14■■□□□ 1.13
TARDBP-228ENST00000629725 NACC1Q96RE7 527 aa22.14■■□□□ 1.13
TARDBP-228ENST00000629725 TUFT1Q9NNX1 390 aa22.14■■□□□ 1.13
TARDBP-228ENST00000629725 SEMA4GQ9NTN9 838 aa22.14■■□□□ 1.13
TARDBP-228ENST00000629725 USP24Q9UPU5 2620 aa22.13■■□□□ 1.13
TARDBP-228ENST00000629725 NRG2O14511 850 aaPredicted RBP22.13■■□□□ 1.13
TARDBP-228ENST00000629725 PFKFB2O60825 505 aa22.13■■□□□ 1.13
TARDBP-228ENST00000629725 CCR2P41597 374 aa22.13■■□□□ 1.13
TARDBP-228ENST00000629725 CXCL12P48061 93 aa22.13■■□□□ 1.13
TARDBP-228ENST00000629725 ARPP19P56211 112 aa22.13■■□□□ 1.13
TARDBP-228ENST00000629725 SIM2Q14190 667 aaPredicted RBP22.13■■□□□ 1.13
TARDBP-228ENST00000629725 CYP4A22Q5TCH4 519 aa22.13■■□□□ 1.13
TARDBP-228ENST00000629725 ATF7IP2Q5U623 682 aa22.13■■□□□ 1.13
TARDBP-228ENST00000629725 VITQ6UXI7 678 aa22.13■■□□□ 1.13
TARDBP-228ENST00000629725 SMARCD2Q92925 531 aa22.13■■□□□ 1.13
TARDBP-228ENST00000629725 CHAMP1Q96JM3 812 aa22.13■■□□□ 1.13
TARDBP-228ENST00000629725 INSL5Q9Y5Q6 135 aa22.13■■□□□ 1.13
TARDBP-228ENST00000629725 CHD6Q8TD26 2715 aa22.12■■□□□ 1.13
TARDBP-228ENST00000629725 SMIM28A0A1B0GU29 152 aa22.12■■□□□ 1.13
TARDBP-228ENST00000629725 WNT7AO00755 349 aa22.12■■□□□ 1.13
TARDBP-228ENST00000629725 MED24O75448 989 aa22.12■■□□□ 1.13
TARDBP-228ENST00000629725 CTDNEP1O95476 244 aa22.12■■□□□ 1.13
TARDBP-228ENST00000629725 SATB1Q01826 763 aa22.12■■□□□ 1.13
TARDBP-228ENST00000629725 PPP2R5AQ15172 486 aa22.12■■□□□ 1.13
TARDBP-228ENST00000629725 IQCEQ6IPM2 695 aa22.12■■□□□ 1.13
TARDBP-228ENST00000629725 PADI6Q6TGC4 694 aa22.12■■□□□ 1.13
TARDBP-228ENST00000629725 PRR23CQ6ZRP0 262 aa22.12■■□□□ 1.13
TARDBP-228ENST00000629725 APBB1IPQ7Z5R6 666 aaPredicted RBP22.12■■□□□ 1.13
TARDBP-228ENST00000629725 ELMOD1Q8N336 334 aa22.12■■□□□ 1.13
TARDBP-228ENST00000629725 DEPDC1BQ8WUY9 529 aa22.12■■□□□ 1.13
TARDBP-228ENST00000629725 ZSWIM3Q96MP5 696 aa22.12■■□□□ 1.13
TARDBP-228ENST00000629725 ZNF263O14978 683 aa22.11■■□□□ 1.13
TARDBP-228ENST00000629725 SEC24AO95486 1093 aa22.11■■□□□ 1.13
TARDBP-228ENST00000629725 CHRNB1P11230 501 aa22.11■■□□□ 1.13
TARDBP-228ENST00000629725 CYP11B2P19099 503 aa22.11■■□□□ 1.13
TARDBP-228ENST00000629725 EFNA5P52803 228 aa22.11■■□□□ 1.13
TARDBP-228ENST00000629725 SOX4Q06945 474 aaPredicted RBP22.11■■□□□ 1.13
TARDBP-228ENST00000629725 CSRP2Q16527 193 aa22.11■■□□□ 1.13
TARDBP-228ENST00000629725 ZNF512Q96ME7 567 aaPredicted RBP22.11■■□□□ 1.13
TARDBP-228ENST00000629725 KIFC3Q9BVG8 833 aa22.11■■□□□ 1.13
TARDBP-228ENST00000629725 TOPORSQ9NS56 1045 aaPredicted RBP22.11■■□□□ 1.13
TARDBP-228ENST00000629725 TPCN1Q9ULQ1 816 aa22.11■■□□□ 1.13
TARDBP-228ENST00000629725 ARHGEF35A5YM69 484 aa22.1■■□□□ 1.13
TARDBP-228ENST00000629725 BTBD18B2RXH4 712 aa22.1■■□□□ 1.13
TARDBP-228ENST00000629725 H7C4K7 107 aa22.1■■□□□ 1.13
TARDBP-228ENST00000629725 SYN3O14994 580 aa22.1■■□□□ 1.13
TARDBP-228ENST00000629725 CCNE1P24864 410 aa22.1■■□□□ 1.13
TARDBP-228ENST00000629725 VIPR2P41587 438 aa22.1■■□□□ 1.13
TARDBP-228ENST00000629725 YARSP54577 528 aaKnown RBP22.1■■□□□ 1.13
TARDBP-228ENST00000629725 NT5DC1Q5TFE4 455 aa22.1■■□□□ 1.13
TARDBP-228ENST00000629725 TPGS2Q68CL5 300 aa22.1■■□□□ 1.13
TARDBP-228ENST00000629725 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.1■■□□□ 1.13
TARDBP-228ENST00000629725 IFT74Q96LB3 600 aa22.1■■□□□ 1.13
TARDBP-228ENST00000629725 POLR3CQ9BUI4 534 aaPredicted RBP22.1■■□□□ 1.13
TARDBP-228ENST00000629725 SLC38A7Q9NVC3 462 aa22.1■■□□□ 1.13
TARDBP-228ENST00000629725 PODXLO00592 558 aa22.09■■□□□ 1.13
TARDBP-228ENST00000629725 HRO43593 1189 aa22.09■■□□□ 1.13
TARDBP-228ENST00000629725 FDPSP14324 419 aaKnown RBP22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms