RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 DCUN1D1Q96GG9 259 aa13.48□□□□□ -0.25
SCN8A-209ENST00000627620 MOV10L1Q9BXT6 1211 aaKnown RBP13.48□□□□□ -0.25
SCN8A-209ENST00000627620 FOXP2O15409 715 aa13.48□□□□□ -0.25
SCN8A-209ENST00000627620 MAPRE2Q15555 327 aa13.48□□□□□ -0.25
SCN8A-209ENST00000627620 EDRF1Q3B7T1 1238 aa13.48□□□□□ -0.25
SCN8A-209ENST00000627620 KIF2CQ99661 725 aa13.48□□□□□ -0.25
SCN8A-209ENST00000627620 ADAM33Q9BZ11 813 aa13.48□□□□□ -0.25
SCN8A-209ENST00000627620 WWP1Q9H0M0 922 aa13.48□□□□□ -0.25
SCN8A-209ENST00000627620 JMJD4Q9H9V9 463 aa13.48□□□□□ -0.25
SCN8A-209ENST00000627620 SUFUQ9UMX1 484 aa13.48□□□□□ -0.25
SCN8A-209ENST00000627620 GUCY1A3Q02108 690 aa13.47□□□□□ -0.25
SCN8A-209ENST00000627620 PIGHQ14442 188 aaPredicted RBP13.47□□□□□ -0.25
SCN8A-209ENST00000627620 IER5Q5VY09 327 aa13.47□□□□□ -0.25
SCN8A-209ENST00000627620 RBM15Q96T37 977 aaKnown RBP eCLIP13.47□□□□□ -0.25
SCN8A-209ENST00000627620 MXRA8Q9BRK3 442 aa13.47□□□□□ -0.25
SCN8A-209ENST00000627620 CCDC90BQ9GZT6 254 aa13.47□□□□□ -0.25
SCN8A-209ENST00000627620 AP3B1O00203 1094 aa13.47□□□□□ -0.25
SCN8A-209ENST00000627620 PRPF4O43172 522 aaKnown RBP eCLIP13.47□□□□□ -0.25
SCN8A-209ENST00000627620 HMBSP08397 361 aa13.47□□□□□ -0.25
SCN8A-209ENST00000627620 FBXW4P57775 412 aa13.47□□□□□ -0.25
SCN8A-209ENST00000627620 CUL3Q13618 768 aa13.47□□□□□ -0.25
SCN8A-209ENST00000627620 NR1I3Q14994 352 aa13.47□□□□□ -0.25
SCN8A-209ENST00000627620 YAF2Q8IY57 180 aa13.47□□□□□ -0.25
SCN8A-209ENST00000627620 ATPAF2Q8N5M1 289 aa13.47□□□□□ -0.25
SCN8A-209ENST00000627620 PCDHGB4Q9UN71 923 aa13.47□□□□□ -0.25
SCN8A-209ENST00000627620 PSMD14O00487 310 aa13.47□□□□□ -0.25
SCN8A-209ENST00000627620 FXR1P51114 621 aaKnown RBP eCLIP13.47□□□□□ -0.25
SCN8A-209ENST00000627620 PRAMEF18Q5VWM3 479 aa13.47□□□□□ -0.25
SCN8A-209ENST00000627620 LRRC8EQ6NSJ5 796 aa13.47□□□□□ -0.25
SCN8A-209ENST00000627620 RUBCNQ92622 972 aa13.47□□□□□ -0.25
SCN8A-209ENST00000627620 PARK7Q99497 189 aaKnown RBP13.47□□□□□ -0.25
SCN8A-209ENST00000627620 RAB6BQ9NRW1 208 aa13.47□□□□□ -0.25
SCN8A-209ENST00000627620 VCPP55072 806 aaKnown RBP13.47□□□□□ -0.25
SCN8A-209ENST00000627620 SENP2Q9HC62 589 aa13.47□□□□□ -0.25
SCN8A-209ENST00000627620 CHUKO15111 745 aa13.46□□□□□ -0.25
SCN8A-209ENST00000627620 NTSR2O95665 410 aa13.46□□□□□ -0.25
SCN8A-209ENST00000627620 SLC9A1P19634 815 aa13.46□□□□□ -0.25
SCN8A-209ENST00000627620 NAB2Q15742 525 aa13.46□□□□□ -0.25
SCN8A-209ENST00000627620 ATF7IP2Q5U623 682 aa13.46□□□□□ -0.25
SCN8A-209ENST00000627620 USP49Q70CQ1 688 aa13.46□□□□□ -0.25
SCN8A-209ENST00000627620 RASGRP2Q7LDG7 609 aa13.46□□□□□ -0.25
SCN8A-209ENST00000627620 PRMT1Q99873 361 aaKnown RBP13.46□□□□□ -0.25
SCN8A-209ENST00000627620 UNC45AQ9H3U1 944 aa13.46□□□□□ -0.25
SCN8A-209ENST00000627620 GGA3Q9NZ52 723 aa13.46□□□□□ -0.25
SCN8A-209ENST00000627620 ZC3H7BQ9UGR2 993 aaKnown RBP13.46□□□□□ -0.25
SCN8A-209ENST00000627620 ITM2BQ9Y287 266 aa13.46□□□□□ -0.25
SCN8A-209ENST00000627620 CD4P01730 458 aa13.46□□□□□ -0.25
SCN8A-209ENST00000627620 ITIH2P19823 946 aa13.46□□□□□ -0.25
SCN8A-209ENST00000627620 VPS72Q15906 364 aa13.46□□□□□ -0.25
SCN8A-209ENST00000627620 COBLL1Q53SF7 1204 aa13.46□□□□□ -0.25
SCN8A-209ENST00000627620 ARHGEF26Q96DR7 871 aa13.46□□□□□ -0.25
SCN8A-209ENST00000627620 NAF1Q96HR8 494 aaKnown RBP13.46□□□□□ -0.25
SCN8A-209ENST00000627620 CHCHD3Q9NX63 227 aaKnown RBP13.46□□□□□ -0.25
SCN8A-209ENST00000627620 EEF2KO00418 725 aaKnown RBP13.46□□□□□ -0.25
SCN8A-209ENST00000627620 PSMD3O43242 534 aa13.46□□□□□ -0.25
SCN8A-209ENST00000627620 GRAP2O75791 330 aa13.46□□□□□ -0.25
SCN8A-209ENST00000627620 IL18RAPO95256 599 aa13.46□□□□□ -0.25
SCN8A-209ENST00000627620 HLA-DRAP01903 254 aa13.46□□□□□ -0.25
SCN8A-209ENST00000627620 ZBTB17Q13105 803 aa13.46□□□□□ -0.25
SCN8A-209ENST00000627620 RFX8Q6ZV50 586 aa13.46□□□□□ -0.25
SCN8A-209ENST00000627620 PPP1R36Q96LQ0 422 aa13.46□□□□□ -0.25
SCN8A-209ENST00000627620 RNF17Q9BXT8 1623 aaKnown RBP13.46□□□□□ -0.25
SCN8A-209ENST00000627620 TLR2O60603 784 aa13.46□□□□□ -0.26
SCN8A-209ENST00000627620 RPS6KA5O75582 802 aa13.46□□□□□ -0.26
SCN8A-209ENST00000627620 AGTP01019 485 aa13.46□□□□□ -0.26
SCN8A-209ENST00000627620 PDHA1P08559 390 aa13.46□□□□□ -0.26
SCN8A-209ENST00000627620 CYP2B6P20813 491 aa13.46□□□□□ -0.26
SCN8A-209ENST00000627620 OCA2Q04671 838 aa13.46□□□□□ -0.26
SCN8A-209ENST00000627620 BYSLQ13895 437 aaKnown RBP13.46□□□□□ -0.26
SCN8A-209ENST00000627620 NUDT18Q6ZVK8 323 aa13.46□□□□□ -0.26
SCN8A-209ENST00000627620 ANO5Q75V66 913 aa13.46□□□□□ -0.26
SCN8A-209ENST00000627620 FBXO33Q7Z6M2 555 aa13.46□□□□□ -0.26
SCN8A-209ENST00000627620 EFHBQ8N7U6 833 aa13.46□□□□□ -0.26
SCN8A-209ENST00000627620 RIT2Q99578 217 aa13.46□□□□□ -0.26
SCN8A-209ENST00000627620 GPBP1L1Q9HC44 474 aaPredicted RBP13.46□□□□□ -0.26
SCN8A-209ENST00000627620 FAM49BQ9NUQ9 324 aa13.46□□□□□ -0.26
SCN8A-209ENST00000627620 XPO7Q9UIA9 1087 aaKnown RBP13.46□□□□□ -0.26
SCN8A-209ENST00000627620 LSM7Q9UK45 103 aaKnown RBP13.46□□□□□ -0.26
SCN8A-209ENST00000627620 CNTNAP5Q8WYK1 1306 aa13.46□□□□□ -0.26
SCN8A-209ENST00000627620 CROCC2H7BZ55 1655 aa13.46□□□□□ -0.26
SCN8A-209ENST00000627620 CCDC78A2IDD5 438 aa13.46□□□□□ -0.26
SCN8A-209ENST00000627620 TCP11X1B4DZS4 312 aa13.46□□□□□ -0.26
SCN8A-209ENST00000627620 SYF2O95926 243 aaKnown RBP13.46□□□□□ -0.26
SCN8A-209ENST00000627620 E4F1Q66K89 784 aaPredicted RBP13.46□□□□□ -0.26
SCN8A-209ENST00000627620 DDX53Q86TM3 631 aaKnown RBP13.46□□□□□ -0.26
SCN8A-209ENST00000627620 TEKT4Q8WW24 435 aa13.46□□□□□ -0.26
SCN8A-209ENST00000627620 JCADQ9P266 1359 aa13.46□□□□□ -0.26
SCN8A-209ENST00000627620 EIF3DO15371 548 aaKnown RBP eCLIP13.45□□□□□ -0.26
SCN8A-209ENST00000627620 ALDH18A1P54886 795 aaKnown RBP13.45□□□□□ -0.26
SCN8A-209ENST00000627620 PDAP1Q13442 181 aaKnown RBP13.45□□□□□ -0.26
SCN8A-209ENST00000627620 CEP70Q8NHQ1 597 aa13.45□□□□□ -0.26
SCN8A-209ENST00000627620 PABPC5Q96DU9 382 aaKnown RBP13.45□□□□□ -0.26
SCN8A-209ENST00000627620 NT5C1AQ9BXI3 368 aa13.45□□□□□ -0.26
SCN8A-209ENST00000627620 SPON1Q9HCB6 807 aa13.45□□□□□ -0.26
SCN8A-209ENST00000627620 MAD2L2Q9UI95 211 aa13.45□□□□□ -0.26
SCN8A-209ENST00000627620 HACL1Q9UJ83 578 aa13.45□□□□□ -0.26
SCN8A-209ENST00000627620 TUBE1Q9UJT0 475 aa13.45□□□□□ -0.26
SCN8A-209ENST00000627620 NEU2Q9Y3R4 380 aa13.45□□□□□ -0.26
SCN8A-209ENST00000627620 SLC4A7Q9Y6M7 1214 aa13.45□□□□□ -0.26
SCN8A-209ENST00000627620 ITGA4P13612 1032 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms