RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 GOLGA2P5Q9HBQ8 144 aa18.21■□□□□ 0.51
UBE3D-208ENST00000626828 FNIP2Q9P278 1114 aa18.21■□□□□ 0.51
UBE3D-208ENST00000626828 UBQLN1Q9UMX0 589 aaKnown RBP18.21■□□□□ 0.51
UBE3D-208ENST00000626828 PODXLO00592 558 aa18.2■□□□□ 0.5
UBE3D-208ENST00000626828 KIAA0391O15091 583 aaKnown RBP18.2■□□□□ 0.5
UBE3D-208ENST00000626828 TEX28O15482 410 aa18.2■□□□□ 0.5
UBE3D-208ENST00000626828 ZNF202O95125 648 aa18.2■□□□□ 0.5
UBE3D-208ENST00000626828 ADH1AP07327 375 aa18.2■□□□□ 0.5
UBE3D-208ENST00000626828 PSMD2Q13200 908 aa18.2■□□□□ 0.5
UBE3D-208ENST00000626828 CD300LGQ6UXG3 332 aa18.2■□□□□ 0.5
UBE3D-208ENST00000626828 EPM2AIP1Q7L775 607 aaPredicted RBP18.2■□□□□ 0.5
UBE3D-208ENST00000626828 CEP57Q86XR8 500 aa18.2■□□□□ 0.5
UBE3D-208ENST00000626828 GRAMD1CQ8IYS0 662 aa18.2■□□□□ 0.5
UBE3D-208ENST00000626828 SMRP1Q8NCR6 262 aa18.2■□□□□ 0.5
UBE3D-208ENST00000626828 CCDC34Q96HJ3 373 aa18.2■□□□□ 0.5
UBE3D-208ENST00000626828 DPP7Q9UHL4 492 aa18.2■□□□□ 0.5
UBE3D-208ENST00000626828 DERAQ9Y315 318 aa18.2■□□□□ 0.5
UBE3D-208ENST00000626828 IL9P15248 144 aa18.19■□□□□ 0.5
UBE3D-208ENST00000626828 LRPAP1P30533 357 aa18.19■□□□□ 0.5
UBE3D-208ENST00000626828 ANP32AP39687 249 aaKnown RBP18.19■□□□□ 0.5
UBE3D-208ENST00000626828 CLCN4P51793 760 aa18.19■□□□□ 0.5
UBE3D-208ENST00000626828 SNRPFP62306 86 aaKnown RBP18.19■□□□□ 0.5
UBE3D-208ENST00000626828 SPAG1Q07617 926 aa18.19■□□□□ 0.5
UBE3D-208ENST00000626828 SMAD2Q15796 467 aaKnown RBP18.19■□□□□ 0.5
UBE3D-208ENST00000626828 KANK3Q6NY19 840 aa18.19■□□□□ 0.5
UBE3D-208ENST00000626828 SYCE2Q6PIF2 218 aa18.19■□□□□ 0.5
UBE3D-208ENST00000626828 CRELD2Q6UXH1 353 aaPredicted RBP18.19■□□□□ 0.5
UBE3D-208ENST00000626828 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.19■□□□□ 0.5
UBE3D-208ENST00000626828 KRBA2Q6ZNG9 492 aa18.19■□□□□ 0.5
UBE3D-208ENST00000626828 PIK3R5Q8WYR1 880 aa18.19■□□□□ 0.5
UBE3D-208ENST00000626828 B3GALT6Q96L58 329 aa18.19■□□□□ 0.5
UBE3D-208ENST00000626828 S1PR5Q9H228 398 aa18.19■□□□□ 0.5
UBE3D-208ENST00000626828 SPTBN5Q9NRC6 3674 aaKnown RBP18.19■□□□□ 0.5
UBE3D-208ENST00000626828 DZANK1Q9NVP4 752 aa18.19■□□□□ 0.5
UBE3D-208ENST00000626828 PRKAG3Q9UGI9 489 aa18.19■□□□□ 0.5
UBE3D-208ENST00000626828 NUB1Q9Y5A7 615 aa18.19■□□□□ 0.5
UBE3D-208ENST00000626828 KLRC4O43908 158 aa18.18■□□□□ 0.5
UBE3D-208ENST00000626828 IL18RAPO95256 599 aa18.18■□□□□ 0.5
UBE3D-208ENST00000626828 EPCAMP16422 314 aa18.18■□□□□ 0.5
UBE3D-208ENST00000626828 FGFR3P22607 806 aa18.18■□□□□ 0.5
UBE3D-208ENST00000626828 IGFBP6P24592 240 aaPredicted RBP18.18■□□□□ 0.5
UBE3D-208ENST00000626828 RTP2Q5QGT7 225 aa18.18■□□□□ 0.5
UBE3D-208ENST00000626828 SPATA1Q5VX52 437 aa18.18■□□□□ 0.5
UBE3D-208ENST00000626828 ELMSAN1Q6PJG2 1045 aa18.18■□□□□ 0.5
UBE3D-208ENST00000626828 GLIS3Q8NEA6 775 aa18.18■□□□□ 0.5
UBE3D-208ENST00000626828 BEST2Q8NFU1 509 aa18.18■□□□□ 0.5
UBE3D-208ENST00000626828 LNX1Q8TBB1 728 aaPredicted RBP18.18■□□□□ 0.5
UBE3D-208ENST00000626828 CCDC47Q96A33 483 aaKnown RBP18.18■□□□□ 0.5
UBE3D-208ENST00000626828 FAM213AQ9BRX8 229 aa18.18■□□□□ 0.5
UBE3D-208ENST00000626828 SLC39A2Q9NP94 309 aa18.18■□□□□ 0.5
UBE3D-208ENST00000626828 PDCD11Q14690 1871 aaKnown RBP18.18■□□□□ 0.5
UBE3D-208ENST00000626828 EXTL3O43909 919 aa18.17■□□□□ 0.5
UBE3D-208ENST00000626828 PAX3P23760 479 aa18.17■□□□□ 0.5
UBE3D-208ENST00000626828 HOXD13P35453 343 aa18.17■□□□□ 0.5
UBE3D-208ENST00000626828 BRCC3P46736 316 aa18.17■□□□□ 0.5
UBE3D-208ENST00000626828 ITIH3Q06033 890 aa18.17■□□□□ 0.5
UBE3D-208ENST00000626828 JADE1Q6IE81 842 aa18.17■□□□□ 0.5
UBE3D-208ENST00000626828 CES5AQ6NT32 575 aa18.17■□□□□ 0.5
UBE3D-208ENST00000626828 ARMCX5Q6P1M9 558 aa18.17■□□□□ 0.5
UBE3D-208ENST00000626828 NT5DC4Q86YG4 428 aa18.17■□□□□ 0.5
UBE3D-208ENST00000626828 C3orf58Q8NDZ4 430 aa18.17■□□□□ 0.5
UBE3D-208ENST00000626828 HDAC7Q8WUI4 952 aa18.17■□□□□ 0.5
UBE3D-208ENST00000626828 SCFD1Q8WVM8 642 aa18.17■□□□□ 0.5
UBE3D-208ENST00000626828 FBXL18Q96ME1 805 aa18.17■□□□□ 0.5
UBE3D-208ENST00000626828 CBWD1Q9BRT8 395 aa18.17■□□□□ 0.5
UBE3D-208ENST00000626828 GOLPH3LQ9H4A5 285 aa18.17■□□□□ 0.5
UBE3D-208ENST00000626828 PCIF1Q9H4Z3 704 aa18.17■□□□□ 0.5
UBE3D-208ENST00000626828 KIAA1586Q9HCI6 787 aa18.17■□□□□ 0.5
UBE3D-208ENST00000626828 EXOC1Q9NV70 894 aa18.17■□□□□ 0.5
UBE3D-208ENST00000626828 CGNQ9P2M7 1197 aaKnown RBP18.17■□□□□ 0.5
UBE3D-208ENST00000626828 TUBGCP4Q9UGJ1 667 aa18.17■□□□□ 0.5
UBE3D-208ENST00000626828 C2CD2Q9Y426 696 aa18.17■□□□□ 0.5
UBE3D-208ENST00000626828 MTCL1Q9Y4B5 1905 aaKnown RBP18.17■□□□□ 0.5
UBE3D-208ENST00000626828 UBE4BO95155 1302 aa18.17■□□□□ 0.5
UBE3D-208ENST00000626828 SYN3O14994 580 aa18.16■□□□□ 0.5
UBE3D-208ENST00000626828 GLUD1P00367 558 aa18.16■□□□□ 0.5
UBE3D-208ENST00000626828 TMEM132DQ14C87 1099 aa18.16■□□□□ 0.5
UBE3D-208ENST00000626828 PSMD5Q16401 504 aa18.16■□□□□ 0.5
UBE3D-208ENST00000626828 KMT5BQ4FZB7 885 aa18.16■□□□□ 0.5
UBE3D-208ENST00000626828 PRSS55Q6UWB4 352 aaPredicted RBP18.16■□□□□ 0.5
UBE3D-208ENST00000626828 ANKS3Q6ZW76 656 aa18.16■□□□□ 0.5
UBE3D-208ENST00000626828 PALB2Q86YC2 1186 aa18.16■□□□□ 0.5
UBE3D-208ENST00000626828 GPD1LQ8N335 351 aa18.16■□□□□ 0.5
UBE3D-208ENST00000626828 SAAL1Q96ER3 474 aa18.16■□□□□ 0.5
UBE3D-208ENST00000626828 SUSD3Q96L08 255 aa18.16■□□□□ 0.5
UBE3D-208ENST00000626828 NECAB3Q96P71 396 aaPredicted RBP18.16■□□□□ 0.5
UBE3D-208ENST00000626828 CLSTN3Q9BQT9 956 aa18.16■□□□□ 0.5
UBE3D-208ENST00000626828 ADAM7Q9H2U9 754 aa18.16■□□□□ 0.5
UBE3D-208ENST00000626828 PLEKHA4Q9H4M7 779 aa18.16■□□□□ 0.5
UBE3D-208ENST00000626828 CHMP5Q9NZZ3 219 aa18.16■□□□□ 0.5
UBE3D-208ENST00000626828 USP15Q9Y4E8 981 aaPredicted RBP18.16■□□□□ 0.5
UBE3D-208ENST00000626828 BDP1A6H8Y1 2624 aa18.16■□□□□ 0.5
UBE3D-208ENST00000626828 GOLGA8IPA6NC78 632 aa18.15■□□□□ 0.5
UBE3D-208ENST00000626828 ZNF233A6NK53 670 aa18.15■□□□□ 0.5
UBE3D-208ENST00000626828 GOLGA8JA6NMD2 632 aa18.15■□□□□ 0.5
UBE3D-208ENST00000626828 RPN1P04843 607 aaKnown RBP18.15■□□□□ 0.5
UBE3D-208ENST00000626828 RPL17P18621 184 aaKnown RBP18.15■□□□□ 0.5
UBE3D-208ENST00000626828 MCM4P33991 863 aa18.15■□□□□ 0.5
UBE3D-208ENST00000626828 STK4Q13043 487 aa18.15■□□□□ 0.5
UBE3D-208ENST00000626828 KNOP1Q1ED39 458 aaKnown RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms