RNA–Protein interactions for RNA: ENST00000624032.3

ATRX-213, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 3,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-213ENST00000624032 EDRF1Q3B7T1 1238 aa12.42□□□□□ -0.42
ATRX-213ENST00000624032 SLC39A4Q6P5W5 647 aa12.42□□□□□ -0.42
ATRX-213ENST00000624032 C7orf31Q8N865 590 aa12.42□□□□□ -0.42
ATRX-213ENST00000624032 RDH13Q8NBN7 331 aa12.42□□□□□ -0.42
ATRX-213ENST00000624032 MINDY3Q9H8M7 445 aa12.42□□□□□ -0.42
ATRX-213ENST00000624032 TMBIM4Q9HC24 238 aa12.42□□□□□ -0.42
ATRX-213ENST00000624032 NRCAMQ92823 1304 aa12.42□□□□□ -0.42
ATRX-213ENST00000624032 SSU72P8A0A1W2PR75 194 aa12.41□□□□□ -0.42
ATRX-213ENST00000624032 RRN3P2A6NIE6 340 aa12.41□□□□□ -0.42
ATRX-213ENST00000624032 TMCO5BA8MYB1 307 aa12.41□□□□□ -0.42
ATRX-213ENST00000624032 K7ERI5 159 aa12.41□□□□□ -0.42
ATRX-213ENST00000624032 CLGNO14967 610 aa12.41□□□□□ -0.42
ATRX-213ENST00000624032 CETN3O15182 167 aa12.41□□□□□ -0.42
ATRX-213ENST00000624032 AKAP3O75969 853 aa12.41□□□□□ -0.42
ATRX-213ENST00000624032 ALCAMQ13740 583 aa12.41□□□□□ -0.42
ATRX-213ENST00000624032 MXD4Q14582 209 aaPredicted RBP12.41□□□□□ -0.42
ATRX-213ENST00000624032 SNCBQ16143 134 aa12.41□□□□□ -0.42
ATRX-213ENST00000624032 MAN2A1Q16706 1144 aa12.41□□□□□ -0.42
ATRX-213ENST00000624032 WLSQ5T9L3 541 aa12.41□□□□□ -0.42
ATRX-213ENST00000624032 LRIG3Q6UXM1 1119 aa12.41□□□□□ -0.42
ATRX-213ENST00000624032 HS2ST1Q7LGA3 356 aa12.41□□□□□ -0.42
ATRX-213ENST00000624032 MAP4K3Q8IVH8 894 aa12.41□□□□□ -0.42
ATRX-213ENST00000624032 CCDC50Q8IVM0 306 aa12.41□□□□□ -0.42
ATRX-213ENST00000624032 EXOC8Q8IYI6 725 aa12.41□□□□□ -0.42
ATRX-213ENST00000624032 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.41□□□□□ -0.42
ATRX-213ENST00000624032 TMEM206Q9H813 350 aa12.41□□□□□ -0.42
ATRX-213ENST00000624032 LUC7LQ9NQ29 371 aaKnown RBP12.41□□□□□ -0.42
ATRX-213ENST00000624032 PLCB1Q9NQ66 1216 aa12.41□□□□□ -0.42
ATRX-213ENST00000624032 A0A087WZ62 844 aa12.41□□□□□ -0.42
ATRX-213ENST00000624032 GMNCA6NCL1 334 aa12.41□□□□□ -0.42
ATRX-213ENST00000624032 TULP1O00294 542 aaPredicted RBP12.41□□□□□ -0.42
ATRX-213ENST00000624032 GAS2O43903 313 aaKnown RBP12.41□□□□□ -0.42
ATRX-213ENST00000624032 MYZAPP0CAP1 466 aa12.41□□□□□ -0.42
ATRX-213ENST00000624032 CYP2C9P11712 490 aa12.41□□□□□ -0.42
ATRX-213ENST00000624032 ADSSP30520 456 aa12.41□□□□□ -0.42
ATRX-213ENST00000624032 TNNC1P63316 161 aa12.41□□□□□ -0.42
ATRX-213ENST00000624032 ASTE1Q2TB18 679 aaPredicted RBP12.41□□□□□ -0.42
ATRX-213ENST00000624032 FAM47CQ5HY64 1035 aa12.41□□□□□ -0.42
ATRX-213ENST00000624032 PPP4R3CPQ6ZMV5 832 aa12.41□□□□□ -0.42
ATRX-213ENST00000624032 CACNA2D4Q7Z3S7 1137 aa12.41□□□□□ -0.42
ATRX-213ENST00000624032 GPIHBP1Q8IV16 184 aa12.41□□□□□ -0.42
ATRX-213ENST00000624032 ZC3H3Q8IXZ2 948 aaKnown RBP12.41□□□□□ -0.42
ATRX-213ENST00000624032 BICD1Q96G01 975 aa12.41□□□□□ -0.42
ATRX-213ENST00000624032 FDXACB1Q9BRP7 624 aaPredicted RBP12.41□□□□□ -0.42
ATRX-213ENST00000624032 KATNAL1Q9BW62 490 aa12.41□□□□□ -0.42
ATRX-213ENST00000624032 GINS2Q9Y248 185 aa12.41□□□□□ -0.42
ATRX-213ENST00000624032 GOLGA8IPA6NC78 632 aa12.41□□□□□ -0.42
ATRX-213ENST00000624032 GOLGA8JA6NMD2 632 aa12.41□□□□□ -0.42
ATRX-213ENST00000624032 KPNA6O60684 536 aa12.41□□□□□ -0.42
ATRX-213ENST00000624032 DNA2P51530 1060 aa12.41□□□□□ -0.42
ATRX-213ENST00000624032 NKX3-2P78367 333 aa12.41□□□□□ -0.42
ATRX-213ENST00000624032 ADAM17P78536 824 aa12.41□□□□□ -0.42
ATRX-213ENST00000624032 TDRD12Q587J7 1177 aaKnown RBP12.41□□□□□ -0.42
ATRX-213ENST00000624032 PDXDC1Q6P996 788 aa12.41□□□□□ -0.42
ATRX-213ENST00000624032 SLC17A8Q8NDX2 589 aa12.41□□□□□ -0.42
ATRX-213ENST00000624032 DNAJB3Q8WWF6 145 aa12.41□□□□□ -0.42
ATRX-213ENST00000624032 BAP1Q92560 729 aa12.41□□□□□ -0.42
ATRX-213ENST00000624032 VTI1AQ96AJ9 217 aa12.41□□□□□ -0.42
ATRX-213ENST00000624032 ZBTB45Q96K62 511 aaPredicted RBP12.41□□□□□ -0.42
ATRX-213ENST00000624032 TARS2Q9BW92 718 aaKnown RBP12.41□□□□□ -0.42
ATRX-213ENST00000624032 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.41□□□□□ -0.42
ATRX-213ENST00000624032 C17orf102A2RUQ5 167 aa12.4□□□□□ -0.42
ATRX-213ENST00000624032 FGFR1OPO95684 399 aaKnown RBP12.4□□□□□ -0.42
ATRX-213ENST00000624032 IQCF3P0C7M6 154 aa12.4□□□□□ -0.42
ATRX-213ENST00000624032 TMOD1P28289 359 aa12.4□□□□□ -0.42
ATRX-213ENST00000624032 NLRP11P59045 1033 aaKnown RBP12.4□□□□□ -0.42
ATRX-213ENST00000624032 SLC9C1Q4G0N8 1177 aa12.4□□□□□ -0.42
ATRX-213ENST00000624032 PARP9Q8IXQ6 854 aa12.4□□□□□ -0.42
ATRX-213ENST00000624032 N4BP2L2Q92802 583 aaPredicted RBP12.4□□□□□ -0.42
ATRX-213ENST00000624032 CEP63Q96MT8 703 aa12.4□□□□□ -0.42
ATRX-213ENST00000624032 EDEM3Q9BZQ6 932 aa12.4□□□□□ -0.42
ATRX-213ENST00000624032 CDHR5Q9HBB8 845 aa12.4□□□□□ -0.42
ATRX-213ENST00000624032 IFT122Q9HBG6 1241 aa12.4□□□□□ -0.42
ATRX-213ENST00000624032 SCN10AQ9Y5Y9 1956 aa12.4□□□□□ -0.42
ATRX-213ENST00000624032 MBLAC1A4D2B0 266 aaPredicted RBP12.4□□□□□ -0.42
ATRX-213ENST00000624032 HNRNPDLO14979 420 aaKnown RBP12.4□□□□□ -0.42
ATRX-213ENST00000624032 PALMO75781 387 aa12.4□□□□□ -0.42
ATRX-213ENST00000624032 HSPA8P11142 646 aaKnown RBP12.4□□□□□ -0.42
ATRX-213ENST00000624032 LBX1P52954 281 aa12.4□□□□□ -0.42
ATRX-213ENST00000624032 STRN3Q13033 797 aa12.4□□□□□ -0.42
ATRX-213ENST00000624032 HLTFQ14527 1009 aaKnown RBP eCLIP12.4□□□□□ -0.423e-7■□□□□ 10.4
ATRX-213ENST00000624032 KIZQ2M2Z5 673 aa12.4□□□□□ -0.42
ATRX-213ENST00000624032 GDF6Q6KF10 455 aaPredicted RBP12.4□□□□□ -0.42
ATRX-213ENST00000624032 CYB5D1Q6P9G0 228 aa12.4□□□□□ -0.42
ATRX-213ENST00000624032 FOXR2Q6PJQ5 311 aa12.4□□□□□ -0.42
ATRX-213ENST00000624032 RNF180Q86T96 592 aa12.4□□□□□ -0.42
ATRX-213ENST00000624032 SAAL1Q96ER3 474 aa12.4□□□□□ -0.42
ATRX-213ENST00000624032 DMAC2Q9NW81 257 aa12.4□□□□□ -0.42
ATRX-213ENST00000624032 EXOC7Q9UPT5 735 aa12.4□□□□□ -0.42
ATRX-213ENST00000624032 INO80B-WBP1J3KQ70 363 aa12.39□□□□□ -0.43
ATRX-213ENST00000624032 RAD51CO43502 376 aa12.39□□□□□ -0.43
ATRX-213ENST00000624032 FTCDO95954 541 aa12.39□□□□□ -0.43
ATRX-213ENST00000624032 RPL13P26373 211 aaKnown RBP12.39□□□□□ -0.43
ATRX-213ENST00000624032 ACLYP53396 1101 aa12.39□□□□□ -0.43
ATRX-213ENST00000624032 CDCA2Q69YH5 1023 aaPredicted RBP12.39□□□□□ -0.43
ATRX-213ENST00000624032 CDR2LQ86X02 465 aaPredicted RBP12.39□□□□□ -0.43
ATRX-213ENST00000624032 EIF1ADQ8N9N8 165 aaKnown RBP12.39□□□□□ -0.43
ATRX-213ENST00000624032 NLRP7Q8WX94 980 aa12.39□□□□□ -0.43
ATRX-213ENST00000624032 HVCN1Q96D96 273 aa12.39□□□□□ -0.43
ATRX-213ENST00000624032 SGSM3Q96HU1 749 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms