RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 MCF2P10911 925 aa9.67□□□□□ -0.86
HDAC9-229ENST00000622668 TCP11X2Q5H9J9 407 aa9.67□□□□□ -0.86
HDAC9-229ENST00000622668 HSPH1Q92598 858 aa9.67□□□□□ -0.86
HDAC9-229ENST00000622668 KCNB2Q92953 911 aa9.67□□□□□ -0.86
HDAC9-229ENST00000622668 ACSF2Q96CM8 615 aaPredicted RBP9.67□□□□□ -0.86
HDAC9-229ENST00000622668 CCDC77Q9BR77 488 aa9.67□□□□□ -0.86
HDAC9-229ENST00000622668 AGXT2Q9BYV1 514 aa9.67□□□□□ -0.86
HDAC9-229ENST00000622668 SMIM35A0A1B0GVV1 85 aa9.67□□□□□ -0.86
HDAC9-229ENST00000622668 SLC26A4O43511 780 aa9.67□□□□□ -0.86
HDAC9-229ENST00000622668 GRAP2O75791 330 aa9.67□□□□□ -0.86
HDAC9-229ENST00000622668 ATP1A3P13637 1013 aa9.67□□□□□ -0.86
HDAC9-229ENST00000622668 EN2P19622 333 aaPredicted RBP9.67□□□□□ -0.86
HDAC9-229ENST00000622668 CASP4P49662 377 aa9.67□□□□□ -0.86
HDAC9-229ENST00000622668 MAATS1Q7Z4T9 603 aa9.67□□□□□ -0.86
HDAC9-229ENST00000622668 ITIH5Q86UX2 942 aa9.67□□□□□ -0.86
HDAC9-229ENST00000622668 ZSCAN30Q86W11 494 aa9.67□□□□□ -0.86
HDAC9-229ENST00000622668 LRRC43Q8N309 656 aa9.67□□□□□ -0.86
HDAC9-229ENST00000622668 FBXO22Q8NEZ5 403 aa9.67□□□□□ -0.86
HDAC9-229ENST00000622668 TRIM62Q9BVG3 475 aa9.67□□□□□ -0.86
HDAC9-229ENST00000622668 DSEQ9UL01 958 aa9.67□□□□□ -0.86
HDAC9-229ENST00000622668 SF3B1O75533 1304 aaKnown RBP eCLIP9.67□□□□□ -0.86
HDAC9-229ENST00000622668 DNM1LO00429 736 aa9.67□□□□□ -0.86
HDAC9-229ENST00000622668 MAP3K13O43283 966 aa9.67□□□□□ -0.86
HDAC9-229ENST00000622668 SPATA31D3P0C874 917 aa9.67□□□□□ -0.86
HDAC9-229ENST00000622668 SCP2P22307 547 aa9.67□□□□□ -0.86
HDAC9-229ENST00000622668 HARS2P49590 506 aaKnown RBP9.67□□□□□ -0.86
HDAC9-229ENST00000622668 TOB1P50616 345 aaPredicted RBP9.67□□□□□ -0.86
HDAC9-229ENST00000622668 GIT2Q14161 759 aa9.67□□□□□ -0.86
HDAC9-229ENST00000622668 SPATA31D4Q6ZUB0 917 aa9.67□□□□□ -0.86
HDAC9-229ENST00000622668 UBA3Q8TBC4 463 aa9.67□□□□□ -0.86
HDAC9-229ENST00000622668 ASAP3Q8TDY4 903 aa9.67□□□□□ -0.86
HDAC9-229ENST00000622668 IFT81Q8WYA0 676 aa9.67□□□□□ -0.86
HDAC9-229ENST00000622668 HHIPL1Q96JK4 782 aa9.67□□□□□ -0.86
HDAC9-229ENST00000622668 DDX43Q9NXZ2 648 aaKnown RBP9.67□□□□□ -0.86
HDAC9-229ENST00000622668 CNOT8Q9UFF9 292 aaKnown RBP9.67□□□□□ -0.86
HDAC9-229ENST00000622668 ROBO3Q96MS0 1386 aa9.67□□□□□ -0.86
HDAC9-229ENST00000622668 IGKV6D-41A0A0C4DH26 115 aa9.66□□□□□ -0.86
HDAC9-229ENST00000622668 ESPNB1AK53 854 aa9.66□□□□□ -0.86
HDAC9-229ENST00000622668 CSF2RAP15509 400 aa9.66□□□□□ -0.86
HDAC9-229ENST00000622668 NOP9Q86U38 636 aaKnown RBP9.66□□□□□ -0.86
HDAC9-229ENST00000622668 CHSY1Q86X52 802 aa9.66□□□□□ -0.86
HDAC9-229ENST00000622668 NDUFAF2Q8N183 169 aa9.66□□□□□ -0.86
HDAC9-229ENST00000622668 CCDC68Q9H2F9 335 aa9.66□□□□□ -0.86
HDAC9-229ENST00000622668 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.66□□□□□ -0.86
HDAC9-229ENST00000622668 FAM47DPA6NHR8 397 aa9.66□□□□□ -0.86
HDAC9-229ENST00000622668 PI4K2BG5E9Z4 385 aa9.66□□□□□ -0.86
HDAC9-229ENST00000622668 PODXLO00592 558 aa9.66□□□□□ -0.86
HDAC9-229ENST00000622668 CYP26A1O43174 497 aa9.66□□□□□ -0.86
HDAC9-229ENST00000622668 MAFO75444 373 aaPredicted RBP9.66□□□□□ -0.86
HDAC9-229ENST00000622668 KRT1P04264 644 aa9.66□□□□□ -0.86
HDAC9-229ENST00000622668 MYZAPP0CAP1 466 aa9.66□□□□□ -0.86
HDAC9-229ENST00000622668 LAG3P18627 525 aa9.66□□□□□ -0.86
HDAC9-229ENST00000622668 GLRA2P23416 452 aa9.66□□□□□ -0.86
HDAC9-229ENST00000622668 GUCY2CP25092 1073 aa9.66□□□□□ -0.86
HDAC9-229ENST00000622668 GUCY2FP51841 1108 aa9.66□□□□□ -0.86
HDAC9-229ENST00000622668 MAP9Q49MG5 647 aa9.66□□□□□ -0.86
HDAC9-229ENST00000622668 ALKBH5Q6P6C2 394 aaKnown RBP9.66□□□□□ -0.86
HDAC9-229ENST00000622668 CHRDL2Q6WN34 429 aa9.66□□□□□ -0.86
HDAC9-229ENST00000622668 ENOSF1Q7L5Y1 443 aa9.66□□□□□ -0.86
HDAC9-229ENST00000622668 RBBP8NLQ8NC74 664 aaPredicted RBP9.66□□□□□ -0.86
HDAC9-229ENST00000622668 TBC1D31Q96DN5 1066 aa9.66□□□□□ -0.86
HDAC9-229ENST00000622668 ABHD8Q96I13 439 aa9.66□□□□□ -0.86
HDAC9-229ENST00000622668 CIPCQ9C0C6 399 aa9.66□□□□□ -0.86
HDAC9-229ENST00000622668 MYO7AQ13402 2215 aa9.66□□□□□ -0.86
HDAC9-229ENST00000622668 CARNS1A5YM72 827 aa9.66□□□□□ -0.86
HDAC9-229ENST00000622668 KCNK3O14649 394 aa9.66□□□□□ -0.86
HDAC9-229ENST00000622668 EIF3DO15371 548 aaKnown RBP eCLIP9.66□□□□□ -0.86
HDAC9-229ENST00000622668 ARHGAP6O43182 974 aa9.66□□□□□ -0.86
HDAC9-229ENST00000622668 CCNE2O96020 404 aa9.66□□□□□ -0.86
HDAC9-229ENST00000622668 NUMBP49757 651 aa9.66□□□□□ -0.86
HDAC9-229ENST00000622668 EVCP57679 992 aa9.66□□□□□ -0.86
HDAC9-229ENST00000622668 RAB30Q15771 203 aa9.66□□□□□ -0.86
HDAC9-229ENST00000622668 ATAT1Q5SQI0 421 aa9.66□□□□□ -0.86
HDAC9-229ENST00000622668 ZNF618Q5T7W0 954 aa9.66□□□□□ -0.86
HDAC9-229ENST00000622668 ZNF467Q7Z7K2 595 aaPredicted RBP9.66□□□□□ -0.86
HDAC9-229ENST00000622668 KLHL7Q8IXQ5 586 aa9.66□□□□□ -0.86
HDAC9-229ENST00000622668 DHX38Q92620 1227 aaKnown RBP9.66□□□□□ -0.86
HDAC9-229ENST00000622668 BADQ92934 168 aa9.66□□□□□ -0.86
HDAC9-229ENST00000622668 MS4A4AQ96JQ5 239 aa9.66□□□□□ -0.86
HDAC9-229ENST00000622668 POP1Q99575 1024 aaKnown RBP9.66□□□□□ -0.86
HDAC9-229ENST00000622668 CORO1BQ9BR76 489 aa9.66□□□□□ -0.86
HDAC9-229ENST00000622668 CLDND1Q9NY35 253 aa9.66□□□□□ -0.86
HDAC9-229ENST00000622668 MTRF1LQ9UGC7 380 aaKnown RBP9.66□□□□□ -0.86
HDAC9-229ENST00000622668 PCDHB5Q9Y5E4 795 aa9.66□□□□□ -0.86
HDAC9-229ENST00000622668 SMIM23A6NLE4 172 aa9.65□□□□□ -0.86
HDAC9-229ENST00000622668 ADCY6O43306 1168 aa9.65□□□□□ -0.86
HDAC9-229ENST00000622668 LONRF2Q1L5Z9 754 aa9.65□□□□□ -0.86
HDAC9-229ENST00000622668 USP41Q3LFD5 358 aa9.65□□□□□ -0.86
HDAC9-229ENST00000622668 TMEM63BQ5T3F8 832 aa9.65□□□□□ -0.86
HDAC9-229ENST00000622668 GPAT2Q6NUI2 795 aa9.65□□□□□ -0.86
HDAC9-229ENST00000622668 ZNF449Q6P9G9 518 aa9.65□□□□□ -0.86
HDAC9-229ENST00000622668 ZNF720Q7Z2F6 126 aa9.65□□□□□ -0.86
HDAC9-229ENST00000622668 DNAAF3Q8N9W5 541 aa9.65□□□□□ -0.86
HDAC9-229ENST00000622668 CSGALNACT1Q8TDX6 532 aa9.65□□□□□ -0.86
HDAC9-229ENST00000622668 GIPC2Q8TF65 315 aa9.65□□□□□ -0.86
HDAC9-229ENST00000622668 IRAK4Q9NWZ3 460 aa9.65□□□□□ -0.86
HDAC9-229ENST00000622668 SAGE1Q9NXZ1 904 aa9.65□□□□□ -0.86
HDAC9-229ENST00000622668 COL1A1P02452 1464 aaPredicted RBP9.65□□□□□ -0.86
HDAC9-229ENST00000622668 DARSP14868 501 aaKnown RBP9.65□□□□□ -0.86
HDAC9-229ENST00000622668 PTK7Q13308 1070 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms