RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 C16orf72Q14CZ0 275 aa8.38□□□□□ -1.07
VPS11-209ENST00000622309 TMEM266Q2M3C6 531 aa8.38□□□□□ -1.07
VPS11-209ENST00000622309 SLC45A4Q5BKX6 768 aa8.38□□□□□ -1.07
VPS11-209ENST00000622309 FYB2Q5VWT5 728 aa8.38□□□□□ -1.07
VPS11-209ENST00000622309 HGSNATQ68CP4 663 aa8.38□□□□□ -1.07
VPS11-209ENST00000622309 CCDC62Q6P9F0 684 aa8.38□□□□□ -1.07
VPS11-209ENST00000622309 NLRP9Q7RTR0 991 aa8.38□□□□□ -1.07
VPS11-209ENST00000622309 MTDHQ86UE4 582 aaKnown RBP8.38□□□□□ -1.07
VPS11-209ENST00000622309 SFR1Q86XK3 245 aa8.38□□□□□ -1.07
VPS11-209ENST00000622309 DDHD1Q8NEL9 900 aa8.38□□□□□ -1.07
VPS11-209ENST00000622309 OR6Y1Q8NGX8 325 aa8.38□□□□□ -1.07
VPS11-209ENST00000622309 ITPKCQ96DU7 683 aa8.38□□□□□ -1.07
VPS11-209ENST00000622309 CEP63Q96MT8 703 aa8.38□□□□□ -1.07
VPS11-209ENST00000622309 FAM161BQ96MY7 647 aa8.38□□□□□ -1.07
VPS11-209ENST00000622309 NACAP1Q9BZK3 213 aa8.38□□□□□ -1.07
VPS11-209ENST00000622309 EDEM3Q9BZQ6 932 aa8.38□□□□□ -1.07
VPS11-209ENST00000622309 SLC4A4Q9Y6R1 1079 aa8.38□□□□□ -1.07
VPS11-209ENST00000622309 PHRF1Q9P1Y6 1649 aaKnown RBP8.37□□□□□ -1.07
VPS11-209ENST00000622309 A0A087X0T9 212 aa8.37□□□□□ -1.07
VPS11-209ENST00000622309 RASA4BC9J798 803 aa8.37□□□□□ -1.07
VPS11-209ENST00000622309 RASA4O43374 803 aa8.37□□□□□ -1.07
VPS11-209ENST00000622309 HAUS5O94927 633 aa8.37□□□□□ -1.07
VPS11-209ENST00000622309 ACSL3O95573 720 aa8.37□□□□□ -1.07
VPS11-209ENST00000622309 FAM228BP0C875 321 aa8.37□□□□□ -1.07
VPS11-209ENST00000622309 CYP2C9P11712 490 aa8.37□□□□□ -1.07
VPS11-209ENST00000622309 RARGP13631 454 aa8.37□□□□□ -1.07
VPS11-209ENST00000622309 TKTP29401 623 aaKnown RBP8.37□□□□□ -1.07
VPS11-209ENST00000622309 PLCB3Q01970 1234 aa8.37□□□□□ -1.07
VPS11-209ENST00000622309 ZBTB16Q05516 673 aa8.37□□□□□ -1.07
VPS11-209ENST00000622309 CYTH1Q15438 398 aa8.37□□□□□ -1.07
VPS11-209ENST00000622309 MAN2A1Q16706 1144 aa8.37□□□□□ -1.07
VPS11-209ENST00000622309 KYNUQ16719 465 aa8.37□□□□□ -1.07
VPS11-209ENST00000622309 LRRC36Q1X8D7 754 aa8.37□□□□□ -1.07
VPS11-209ENST00000622309 SPDYAQ5MJ70 313 aa8.37□□□□□ -1.07
VPS11-209ENST00000622309 DEPDC1Q5TB30 811 aa8.37□□□□□ -1.07
VPS11-209ENST00000622309 JAMLQ86YT9 394 aa8.37□□□□□ -1.07
VPS11-209ENST00000622309 SRRM1Q8IYB3 904 aaKnown RBP8.37□□□□□ -1.07
VPS11-209ENST00000622309 SLC7A5P1Q8MH63 180 aa8.37□□□□□ -1.07
VPS11-209ENST00000622309 CMTR1Q8N1G2 835 aaKnown RBP8.37□□□□□ -1.07
VPS11-209ENST00000622309 SYNE4Q8N205 404 aa8.37□□□□□ -1.07
VPS11-209ENST00000622309 GIMAP8Q8ND71 665 aaPredicted RBP8.37□□□□□ -1.07
VPS11-209ENST00000622309 PRICKLE1Q96MT3 831 aaPredicted RBP8.37□□□□□ -1.07
VPS11-209ENST00000622309 GPR101Q96P66 508 aaPredicted RBP8.37□□□□□ -1.07
VPS11-209ENST00000622309 PPP1R10Q96QC0 940 aaKnown RBP8.37□□□□□ -1.07
VPS11-209ENST00000622309 NAPBQ9H115 298 aa8.37□□□□□ -1.07
VPS11-209ENST00000622309 TMOD3Q9NYL9 352 aa8.37□□□□□ -1.07
VPS11-209ENST00000622309 DENND2AQ9ULE3 1009 aa8.37□□□□□ -1.07
VPS11-209ENST00000622309 GIT1Q9Y2X7 761 aa8.37□□□□□ -1.07
VPS11-209ENST00000622309 COQ6Q9Y2Z9 468 aa8.37□□□□□ -1.07
VPS11-209ENST00000622309 ATP6V0A2Q9Y487 856 aa8.37□□□□□ -1.07
VPS11-209ENST00000622309 TIMM22Q9Y584 194 aa8.37□□□□□ -1.07
VPS11-209ENST00000622309 ZBED1O96006 694 aa8.37□□□□□ -1.07
VPS11-209ENST00000622309 ESRRAP11474 423 aaPredicted RBP8.37□□□□□ -1.07
VPS11-209ENST00000622309 UQCRBP14927 111 aa8.37□□□□□ -1.07
VPS11-209ENST00000622309 CETN2P41208 172 aa8.37□□□□□ -1.07
VPS11-209ENST00000622309 RAB15P59190 212 aa8.37□□□□□ -1.07
VPS11-209ENST00000622309 PTENP60484 403 aa8.37□□□□□ -1.07
VPS11-209ENST00000622309 DHX34Q14147 1143 aaKnown RBP8.37□□□□□ -1.07
VPS11-209ENST00000622309 MPP2Q14168 576 aa8.37□□□□□ -1.07
VPS11-209ENST00000622309 PDK3Q15120 406 aa8.37□□□□□ -1.07
VPS11-209ENST00000622309 METTL21CQ5VZV1 264 aa8.37□□□□□ -1.07
VPS11-209ENST00000622309 DNAJC10Q8IXB1 793 aa8.37□□□□□ -1.07
VPS11-209ENST00000622309 SYCE1Q8N0S2 351 aa8.37□□□□□ -1.07
VPS11-209ENST00000622309 RASGEF1CQ8N431 466 aa8.37□□□□□ -1.07
VPS11-209ENST00000622309 NSL1Q96IY1 281 aa8.37□□□□□ -1.07
VPS11-209ENST00000622309 UBN1Q9NPG3 1134 aa8.37□□□□□ -1.07
VPS11-209ENST00000622309 DNAJC17Q9NVM6 304 aaKnown RBP8.37□□□□□ -1.07
VPS11-209ENST00000622309 COMMD8Q9NX08 183 aa8.37□□□□□ -1.07
VPS11-209ENST00000622309 STXBP5LQ9Y2K9 1186 aa8.37□□□□□ -1.07
VPS11-209ENST00000622309 CASZ1Q86V15 1759 aa8.37□□□□□ -1.07
VPS11-209ENST00000622309 SPAG7O75391 227 aa8.36□□□□□ -1.07
VPS11-209ENST00000622309 RHOBTB3O94955 611 aa8.36□□□□□ -1.07
VPS11-209ENST00000622309 OCM2P0CE71 109 aa8.36□□□□□ -1.07
VPS11-209ENST00000622309 OCMP0CE72 109 aaPredicted RBP8.36□□□□□ -1.07
VPS11-209ENST00000622309 RBP3P10745 1247 aa8.36□□□□□ -1.07
VPS11-209ENST00000622309 CCT8P50990 548 aa8.36□□□□□ -1.07
VPS11-209ENST00000622309 PDE4DQ08499 809 aa8.36□□□□□ -1.07
VPS11-209ENST00000622309 GRM2Q14416 872 aa8.36□□□□□ -1.07
VPS11-209ENST00000622309 NADK2Q4G0N4 442 aa8.36□□□□□ -1.07
VPS11-209ENST00000622309 LRRC24Q50LG9 513 aa8.36□□□□□ -1.07
VPS11-209ENST00000622309 MAP3K21Q5TCX8 1036 aa8.36□□□□□ -1.07
VPS11-209ENST00000622309 ZDHHC24Q6UX98 284 aa8.36□□□□□ -1.07
VPS11-209ENST00000622309 CLNKQ7Z7G1 428 aa8.36□□□□□ -1.07
VPS11-209ENST00000622309 ANKRD35Q8N283 1001 aa8.36□□□□□ -1.07
VPS11-209ENST00000622309 ZNF713Q8N859 430 aaPredicted RBP8.36□□□□□ -1.07
VPS11-209ENST00000622309 PLBD2Q8NHP8 589 aa8.36□□□□□ -1.07
VPS11-209ENST00000622309 HELQQ8TDG4 1101 aa8.36□□□□□ -1.07
VPS11-209ENST00000622309 NSMCE3Q96MG7 304 aa8.36□□□□□ -1.07
VPS11-209ENST00000622309 GBA3Q9H227 469 aa8.36□□□□□ -1.07
VPS11-209ENST00000622309 TBC1D23Q9NUY8 699 aa8.36□□□□□ -1.07
VPS11-209ENST00000622309 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.36□□□□□ -1.07
VPS11-209ENST00000622309 UTYO14607 1347 aa8.36□□□□□ -1.07
VPS11-209ENST00000622309 FOXO6A8MYZ6 492 aa8.36□□□□□ -1.07
VPS11-209ENST00000622309 KIAA0391O15091 583 aaKnown RBP8.36□□□□□ -1.07
VPS11-209ENST00000622309 ADCY6O43306 1168 aa8.36□□□□□ -1.07
VPS11-209ENST00000622309 XPOTO43592 962 aaKnown RBP8.36□□□□□ -1.07
VPS11-209ENST00000622309 ATP6V1B1P15313 513 aa8.36□□□□□ -1.07
VPS11-209ENST00000622309 VCLP18206 1134 aa8.36□□□□□ -1.07
VPS11-209ENST00000622309 AMPD1P23109 780 aa8.36□□□□□ -1.07
VPS11-209ENST00000622309 PPP1R2P41236 205 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms