RNA–Protein interactions for RNA: ENST00000621728.4

SEMA6C-210, Transcript of semaphorin 6C, humanhuman

TSL 1 (best) BASIC

Gene SEMA6C, Length 1,918 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-210ENST00000621728 KIF12Q96FN5 646 aa20.04■□□□□ 0.8
SEMA6C-210ENST00000621728 ANKRD36BP1Q96IX9 119 aa20.04■□□□□ 0.8
SEMA6C-210ENST00000621728 STK33Q9BYT3 514 aa20.04■□□□□ 0.8
SEMA6C-210ENST00000621728 ASB7Q9H672 318 aa20.04■□□□□ 0.8
SEMA6C-210ENST00000621728 SIX4Q9UIU6 781 aa20.04■□□□□ 0.8
SEMA6C-210ENST00000621728 PCDHB2Q9Y5E7 798 aa20.04■□□□□ 0.8
SEMA6C-210ENST00000621728 CAND2O75155 1236 aa20.04■□□□□ 0.8
SEMA6C-210ENST00000621728 CLSTN1O94985 981 aa20.04■□□□□ 0.8
SEMA6C-210ENST00000621728 TNNC2P02585 160 aa20.04■□□□□ 0.8
SEMA6C-210ENST00000621728 TNNT1P13805 278 aa20.04■□□□□ 0.8
SEMA6C-210ENST00000621728 GJA8P48165 433 aa20.04■□□□□ 0.8
SEMA6C-210ENST00000621728 TMEM132DQ14C87 1099 aa20.04■□□□□ 0.8
SEMA6C-210ENST00000621728 ASIC2Q16515 512 aa20.04■□□□□ 0.8
SEMA6C-210ENST00000621728 TRIM60Q495X7 471 aa20.04■□□□□ 0.8
SEMA6C-210ENST00000621728 IRF2BP2Q7Z5L9 587 aa20.04■□□□□ 0.8
SEMA6C-210ENST00000621728 LPPQ93052 612 aa20.04■□□□□ 0.8
SEMA6C-210ENST00000621728 NHEJ1Q9H9Q4 299 aaPredicted RBP20.04■□□□□ 0.8
SEMA6C-210ENST00000621728 NUB1Q9Y5A7 615 aa20.04■□□□□ 0.8
SEMA6C-210ENST00000621728 A0A0U1RQJ8 604 aa20.03■□□□□ 0.8
SEMA6C-210ENST00000621728 FOXN3O00409 490 aaPredicted RBP20.03■□□□□ 0.8
SEMA6C-210ENST00000621728 COL6A1P12109 1028 aa20.03■□□□□ 0.8
SEMA6C-210ENST00000621728 EIF4A3P38919 411 aaKnown RBP20.03■□□□□ 0.8
SEMA6C-210ENST00000621728 AP3M2P53677 418 aa20.03■□□□□ 0.8
SEMA6C-210ENST00000621728 YARSP54577 528 aaKnown RBP20.03■□□□□ 0.8
SEMA6C-210ENST00000621728 LRRC8DQ7L1W4 858 aa20.03■□□□□ 0.8
SEMA6C-210ENST00000621728 ACRBPQ8NEB7 543 aa20.03■□□□□ 0.8
SEMA6C-210ENST00000621728 ATRIPQ8WXE1 791 aa20.03■□□□□ 0.8
SEMA6C-210ENST00000621728 C18orf25Q96B23 403 aaPredicted RBP20.03■□□□□ 0.8
SEMA6C-210ENST00000621728 FAM105AQ9NUU6 356 aa20.03■□□□□ 0.8
SEMA6C-210ENST00000621728 AIPL1Q9NZN9 384 aa20.03■□□□□ 0.8
SEMA6C-210ENST00000621728 KIAA0100Q14667 2235 aaKnown RBP20.03■□□□□ 0.8
SEMA6C-210ENST00000621728 ITGB3P05106 788 aa20.02■□□□□ 0.8
SEMA6C-210ENST00000621728 KRT19P08727 400 aa20.02■□□□□ 0.8
SEMA6C-210ENST00000621728 POU5F1Q01860 360 aaKnown RBP20.02■□□□□ 0.8
SEMA6C-210ENST00000621728 DSC3Q14574 896 aa20.02■□□□□ 0.8
SEMA6C-210ENST00000621728 GLIPR1L2Q4G1C9 344 aa20.02■□□□□ 0.8
SEMA6C-210ENST00000621728 ALKAL1Q6UXT8 129 aa20.02■□□□□ 0.8
SEMA6C-210ENST00000621728 CXorf38Q8TB03 319 aa20.02■□□□□ 0.8
SEMA6C-210ENST00000621728 C1orf112Q9NSG2 853 aa20.02■□□□□ 0.8
SEMA6C-210ENST00000621728 TUBGCP4Q9UGJ1 667 aa20.02■□□□□ 0.8
SEMA6C-210ENST00000621728 SCN5AQ14524 2016 aa20.02■□□□□ 0.8
SEMA6C-210ENST00000621728 SELPP16109 830 aa20.02■□□□□ 0.79
SEMA6C-210ENST00000621728 SOX5P35711 763 aa20.02■□□□□ 0.79
SEMA6C-210ENST00000621728 STAT1P42224 750 aa20.02■□□□□ 0.79
SEMA6C-210ENST00000621728 NOP14P78316 857 aaKnown RBP20.02■□□□□ 0.79
SEMA6C-210ENST00000621728 TLE2Q04725 743 aa20.02■□□□□ 0.79
SEMA6C-210ENST00000621728 GPNMBQ14956 572 aa20.02■□□□□ 0.79
SEMA6C-210ENST00000621728 TDRD12Q587J7 1177 aaKnown RBP20.02■□□□□ 0.79
SEMA6C-210ENST00000621728 WDR44Q5JSH3 913 aa20.02■□□□□ 0.79
SEMA6C-210ENST00000621728 CAGE1Q8TC20 777 aa20.02■□□□□ 0.79
SEMA6C-210ENST00000621728 SYN2Q92777 582 aaPredicted RBP20.02■□□□□ 0.79
SEMA6C-210ENST00000621728 ADAM2Q99965 735 aa20.02■□□□□ 0.79
SEMA6C-210ENST00000621728 NUCKS1Q9H1E3 243 aaKnown RBP20.02■□□□□ 0.79
SEMA6C-210ENST00000621728 CHST12Q9NRB3 414 aa20.02■□□□□ 0.79
SEMA6C-210ENST00000621728 PCDH10Q9P2E7 1040 aa20.02■□□□□ 0.79
SEMA6C-210ENST00000621728 ZSCAN20P17040 1043 aaPredicted RBP20.01■□□□□ 0.79
SEMA6C-210ENST00000621728 AFF1P51825 1210 aaKnown RBP20.01■□□□□ 0.79
SEMA6C-210ENST00000621728 TRPC3Q13507 836 aa20.01■□□□□ 0.79
SEMA6C-210ENST00000621728 NYAP1Q6ZVC0 841 aa20.01■□□□□ 0.79
SEMA6C-210ENST00000621728 CCAR2Q8N163 923 aaKnown RBP20.01■□□□□ 0.79
SEMA6C-210ENST00000621728 PAWRQ96IZ0 340 aaKnown RBP20.01■□□□□ 0.79
SEMA6C-210ENST00000621728 ZFP42Q96MM3 310 aa20.01■□□□□ 0.79
SEMA6C-210ENST00000621728 SEZ6LQ9BYH1 1024 aa20.01■□□□□ 0.79
SEMA6C-210ENST00000621728 XYLT2Q9H1B5 865 aa20.01■□□□□ 0.79
SEMA6C-210ENST00000621728 HAUS4Q9H6D7 363 aa20.01■□□□□ 0.79
SEMA6C-210ENST00000621728 PLEKHA5Q9HAU0 1116 aa20.01■□□□□ 0.79
SEMA6C-210ENST00000621728 CNTN3Q9P232 1028 aa20.01■□□□□ 0.79
SEMA6C-210ENST00000621728 MYO6Q9UM54 1294 aa20.01■□□□□ 0.79
SEMA6C-210ENST00000621728 REXO2Q9Y3B8 237 aaKnown RBP20.01■□□□□ 0.79
SEMA6C-210ENST00000621728 CTIFO43310 598 aaKnown RBP20■□□□□ 0.79
SEMA6C-210ENST00000621728 EVI5O60447 810 aa20■□□□□ 0.79
SEMA6C-210ENST00000621728 NBNO60934 754 aa20■□□□□ 0.79
SEMA6C-210ENST00000621728 ASS1P00966 412 aaKnown RBP20■□□□□ 0.79
SEMA6C-210ENST00000621728 CALCAP01258 141 aa20■□□□□ 0.79
SEMA6C-210ENST00000621728 SERPING1P05155 500 aa20■□□□□ 0.79
SEMA6C-210ENST00000621728 RFX1P22670 979 aa20■□□□□ 0.79
SEMA6C-210ENST00000621728 USP8P40818 1118 aa20■□□□□ 0.79
SEMA6C-210ENST00000621728 CDK17Q00537 523 aa20■□□□□ 0.79
SEMA6C-210ENST00000621728 KLHL30Q0D2K2 578 aa20■□□□□ 0.79
SEMA6C-210ENST00000621728 FAAP100Q0VG06 881 aa20■□□□□ 0.79
SEMA6C-210ENST00000621728 IFIH1Q9BYX4 1025 aaKnown RBP20■□□□□ 0.79
SEMA6C-210ENST00000621728 ACP6Q9NPH0 428 aa20■□□□□ 0.79
SEMA6C-210ENST00000621728 DPP3Q9NY33 737 aa20■□□□□ 0.79
SEMA6C-210ENST00000621728 ATP11BQ9Y2G3 1177 aa20■□□□□ 0.79
SEMA6C-210ENST00000621728 C2CD2Q9Y426 696 aa20■□□□□ 0.79
SEMA6C-210ENST00000621728 ADGRG1Q9Y653 693 aa20■□□□□ 0.79
SEMA6C-210ENST00000621728 EPN1Q9Y6I3 576 aaPredicted RBP20■□□□□ 0.79
SEMA6C-210ENST00000621728 PPEF2O14830 753 aa20■□□□□ 0.79
SEMA6C-210ENST00000621728 ZC3H11AO75152 810 aaKnown RBP eCLIP20■□□□□ 0.79
SEMA6C-210ENST00000621728 NDUFA10O95299 355 aa20■□□□□ 0.79
SEMA6C-210ENST00000621728 POLR2BP30876 1174 aaKnown RBP20■□□□□ 0.79
SEMA6C-210ENST00000621728 MFAP3P55082 362 aa20■□□□□ 0.79
SEMA6C-210ENST00000621728 BFSP2Q13515 415 aa20■□□□□ 0.79
SEMA6C-210ENST00000621728 PTPN14Q15678 1187 aa20■□□□□ 0.79
SEMA6C-210ENST00000621728 ANKRD33Q7Z3H0 272 aa20■□□□□ 0.79
SEMA6C-210ENST00000621728 RTN4RL1Q86UN2 441 aaPredicted RBP20■□□□□ 0.79
SEMA6C-210ENST00000621728 RNF169Q8NCN4 708 aa20■□□□□ 0.79
SEMA6C-210ENST00000621728 LINC01599Q8WXQ3 324 aa20■□□□□ 0.79
SEMA6C-210ENST00000621728 SCLYQ96I15 445 aa20■□□□□ 0.79
SEMA6C-210ENST00000621728 C16orf45Q96MC5 204 aaPredicted RBP20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms