RNA–Protein interactions for RNA: ENST00000621325.1

LIME1-210, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 2,410 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-210ENST00000621325 CPA5Q8WXQ8 436 aa22.79■■□□□ 1.24
LIME1-210ENST00000621325 CARD9Q9H257 536 aa22.79■■□□□ 1.24
LIME1-210ENST00000621325 ACBD3Q9H3P7 528 aa22.79■■□□□ 1.24
LIME1-210ENST00000621325 MINDY3Q9H8M7 445 aa22.79■■□□□ 1.24
LIME1-210ENST00000621325 AMACRQ9UHK6 382 aa22.79■■□□□ 1.24
LIME1-210ENST00000621325 PCDHB2Q9Y5E7 798 aa22.79■■□□□ 1.24
LIME1-210ENST00000621325 GAS2O43903 313 aaKnown RBP22.79■■□□□ 1.24
LIME1-210ENST00000621325 UNGP13051 313 aaPredicted RBP22.79■■□□□ 1.24
LIME1-210ENST00000621325 GGCXP38435 758 aa22.79■■□□□ 1.24
LIME1-210ENST00000621325 EMBQ6PCB8 327 aa22.79■■□□□ 1.24
LIME1-210ENST00000621325 MAMDC4Q6UXC1 1216 aa22.79■■□□□ 1.24
LIME1-210ENST00000621325 GPATCH11Q8N954 259 aa22.79■■□□□ 1.24
LIME1-210ENST00000621325 TTC7AQ9ULT0 858 aaPredicted RBP22.79■■□□□ 1.24
LIME1-210ENST00000621325 INO80B-WBP1J3KQ70 363 aa22.78■■□□□ 1.24
LIME1-210ENST00000621325 HBP1O60381 514 aa22.78■■□□□ 1.24
LIME1-210ENST00000621325 CLTAP09496 248 aa22.78■■□□□ 1.24
LIME1-210ENST00000621325 HSP90B2PQ58FF3 399 aa22.78■■□□□ 1.24
LIME1-210ENST00000621325 LLGL2Q6P1M3 1020 aa22.78■■□□□ 1.24
LIME1-210ENST00000621325 TMEM270Q6UE05 265 aa22.78■■□□□ 1.24
LIME1-210ENST00000621325 INO80BQ9C086 356 aaPredicted RBP22.78■■□□□ 1.24
LIME1-210ENST00000621325 MTMR12Q9C0I1 747 aa22.78■■□□□ 1.24
LIME1-210ENST00000621325 CNOT8Q9UFF9 292 aaKnown RBP22.78■■□□□ 1.24
LIME1-210ENST00000621325 PCDHB4Q9Y5E5 795 aa22.78■■□□□ 1.24
LIME1-210ENST00000621325 SLC26A2P50443 739 aa22.78■■□□□ 1.24
LIME1-210ENST00000621325 OSTNP61366 133 aa22.78■■□□□ 1.24
LIME1-210ENST00000621325 CEP120Q8N960 986 aa22.78■■□□□ 1.24
LIME1-210ENST00000621325 FAM81BQ96LP2 452 aa22.78■■□□□ 1.24
LIME1-210ENST00000621325 SCN4AP35499 1836 aa22.77■■□□□ 1.24
LIME1-210ENST00000621325 CCDC188H7C350 402 aa22.77■■□□□ 1.24
LIME1-210ENST00000621325 OGTO15294 1046 aa22.77■■□□□ 1.24
LIME1-210ENST00000621325 CSDE1O75534 798 aaKnown RBP22.77■■□□□ 1.24
LIME1-210ENST00000621325 IQCF3P0C7M6 154 aa22.77■■□□□ 1.24
LIME1-210ENST00000621325 CETPP11597 493 aa22.77■■□□□ 1.24
LIME1-210ENST00000621325 GUCY2FP51841 1108 aa22.77■■□□□ 1.24
LIME1-210ENST00000621325 CCNA1P78396 465 aa22.77■■□□□ 1.24
LIME1-210ENST00000621325 MCL1Q07820 350 aa22.77■■□□□ 1.24
LIME1-210ENST00000621325 EEF1DP3Q658K8 133 aa22.77■■□□□ 1.24
LIME1-210ENST00000621325 DDX42Q86XP3 938 aaKnown RBP eCLIP22.77■■□□□ 1.24
LIME1-210ENST00000621325 THNSL1Q8IYQ7 743 aa22.77■■□□□ 1.24
LIME1-210ENST00000621325 CAVIN3Q969G5 261 aa22.77■■□□□ 1.24
LIME1-210ENST00000621325 PPP1R16BQ96T49 567 aa22.77■■□□□ 1.24
LIME1-210ENST00000621325 ZSWIM1Q9BR11 485 aa22.77■■□□□ 1.24
LIME1-210ENST00000621325 CELF4Q9BZC1 486 aaKnown RBP22.77■■□□□ 1.24
LIME1-210ENST00000621325 TRIM7Q9C029 511 aa22.77■■□□□ 1.24
LIME1-210ENST00000621325 ERVK-5Q9HDB9 667 aa22.77■■□□□ 1.24
LIME1-210ENST00000621325 ERAP1Q9NZ08 941 aa22.77■■□□□ 1.24
LIME1-210ENST00000621325 C22orf31O95567 290 aa22.77■■□□□ 1.24
LIME1-210ENST00000621325 LGALS2P05162 132 aa22.77■■□□□ 1.24
LIME1-210ENST00000621325 INSRRP14616 1297 aa22.77■■□□□ 1.24
LIME1-210ENST00000621325 ADCYAP1R1P41586 468 aa22.77■■□□□ 1.24
LIME1-210ENST00000621325 PAK2Q13177 524 aa22.77■■□□□ 1.24
LIME1-210ENST00000621325 PASD1Q8IV76 773 aa22.77■■□□□ 1.24
LIME1-210ENST00000621325 FAM71BQ8TC56 605 aa22.77■■□□□ 1.24
LIME1-210ENST00000621325 CYFIP2Q96F07 1278 aa22.77■■□□□ 1.24
LIME1-210ENST00000621325 CPSF3Q9UKF6 684 aaKnown RBP22.77■■□□□ 1.24
LIME1-210ENST00000621325 ADAM21Q9UKJ8 722 aa22.77■■□□□ 1.24
LIME1-210ENST00000621325 EVPLQ92817 2033 aa22.77■■□□□ 1.23
LIME1-210ENST00000621325 PEX5P50542 639 aa22.76■■□□□ 1.23
LIME1-210ENST00000621325 AFG1LQ8WV93 481 aa22.76■■□□□ 1.23
LIME1-210ENST00000621325 CD101Q93033 1021 aa22.76■■□□□ 1.23
LIME1-210ENST00000621325 RPS6KC1Q96S38 1066 aa22.76■■□□□ 1.23
LIME1-210ENST00000621325 C2orf40Q9H1Z8 148 aa22.76■■□□□ 1.23
LIME1-210ENST00000621325 FZD8Q9H461 694 aa22.76■■□□□ 1.23
LIME1-210ENST00000621325 PTPRHQ9HD43 1115 aa22.76■■□□□ 1.23
LIME1-210ENST00000621325 MED4Q9NPJ6 270 aa22.76■■□□□ 1.23
LIME1-210ENST00000621325 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.76■■□□□ 1.23
LIME1-210ENST00000621325 GOLGA6BA6NDN3 693 aa22.76■■□□□ 1.23
LIME1-210ENST00000621325 ZNF286BP0CG31 522 aa22.76■■□□□ 1.23
LIME1-210ENST00000621325 WDR49Q8IV35 697 aa22.76■■□□□ 1.23
LIME1-210ENST00000621325 EXOC8Q8IYI6 725 aa22.76■■□□□ 1.23
LIME1-210ENST00000621325 MCOLN2Q8IZK6 566 aa22.76■■□□□ 1.23
LIME1-210ENST00000621325 MIF4GDA9UHW6 222 aaKnown RBP22.75■■□□□ 1.23
LIME1-210ENST00000621325 ACKR2O00590 384 aa22.75■■□□□ 1.23
LIME1-210ENST00000621325 TTI1O43156 1089 aa22.75■■□□□ 1.23
LIME1-210ENST00000621325 PROZP22891 400 aa22.75■■□□□ 1.23
LIME1-210ENST00000621325 MYL6P60660 151 aa22.75■■□□□ 1.23
LIME1-210ENST00000621325 MBTD1Q05BQ5 628 aa22.75■■□□□ 1.23
LIME1-210ENST00000621325 LAMC2Q13753 1193 aa22.75■■□□□ 1.23
LIME1-210ENST00000621325 ATF7IP2Q5U623 682 aa22.75■■□□□ 1.23
LIME1-210ENST00000621325 TSHZ1Q6ZSZ6 1077 aa22.75■■□□□ 1.23
LIME1-210ENST00000621325 RBBP8NLQ8NC74 664 aaPredicted RBP22.75■■□□□ 1.23
LIME1-210ENST00000621325 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.75■■□□□ 1.23
LIME1-210ENST00000621325 UVRAGQ9P2Y5 699 aa22.75■■□□□ 1.23
LIME1-210ENST00000621325 RNF40O75150 1001 aa22.74■■□□□ 1.23
LIME1-210ENST00000621325 RRM1P23921 792 aa22.74■■□□□ 1.23
LIME1-210ENST00000621325 ECHS1P30084 290 aa22.74■■□□□ 1.23
LIME1-210ENST00000621325 GTF2A2P52657 109 aa22.74■■□□□ 1.23
LIME1-210ENST00000621325 PTENP60484 403 aa22.74■■□□□ 1.23
LIME1-210ENST00000621325 ZNF568Q3ZCX4 644 aa22.74■■□□□ 1.23
LIME1-210ENST00000621325 MPZL3Q6UWV2 235 aa22.74■■□□□ 1.23
LIME1-210ENST00000621325 UBL4BQ8N7F7 174 aa22.74■■□□□ 1.23
LIME1-210ENST00000621325 GTF3C2Q8WUA4 911 aaPredicted RBP22.74■■□□□ 1.23
LIME1-210ENST00000621325 JPH2Q9BR39 696 aaPredicted RBP22.74■■□□□ 1.23
LIME1-210ENST00000621325 KATNBL1Q9H079 304 aa22.74■■□□□ 1.23
LIME1-210ENST00000621325 SPOPO43791 374 aa22.74■■□□□ 1.23
LIME1-210ENST00000621325 SNAI1O95863 264 aaPredicted RBP22.74■■□□□ 1.23
LIME1-210ENST00000621325 CYP1A1P04798 512 aaPredicted RBP22.74■■□□□ 1.23
LIME1-210ENST00000621325 BPIFB4P59827 614 aa22.74■■□□□ 1.23
LIME1-210ENST00000621325 POU5F1Q01860 360 aaKnown RBP22.74■■□□□ 1.23
LIME1-210ENST00000621325 TFDP1Q14186 410 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms