RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 ANKRD20A1Q5TYW2 823 aa10.33□□□□□ -0.76
CLTCL1-211ENST00000621271 RDM1Q8NG50 284 aa10.33□□□□□ -0.76
CLTCL1-211ENST00000621271 HNRNPCL2B2RXH8 293 aa10.33□□□□□ -0.76
CLTCL1-211ENST00000621271 CCDC188H7C350 402 aa10.33□□□□□ -0.76
CLTCL1-211ENST00000621271 PIK3R2O00459 728 aa10.33□□□□□ -0.76
CLTCL1-211ENST00000621271 HNRNPCL1O60812 293 aaKnown RBP10.33□□□□□ -0.76
CLTCL1-211ENST00000621271 CKMP06732 381 aa10.33□□□□□ -0.76
CLTCL1-211ENST00000621271 OCM2P0CE71 109 aa10.33□□□□□ -0.76
CLTCL1-211ENST00000621271 OCMP0CE72 109 aaPredicted RBP10.33□□□□□ -0.76
CLTCL1-211ENST00000621271 ACADSBP45954 432 aa10.33□□□□□ -0.76
CLTCL1-211ENST00000621271 ATXN3P54252 364 aaPredicted RBP10.33□□□□□ -0.76
CLTCL1-211ENST00000621271 COPS2P61201 443 aa10.33□□□□□ -0.76
CLTCL1-211ENST00000621271 ZBTB41Q5SVQ8 909 aa10.33□□□□□ -0.76
CLTCL1-211ENST00000621271 FMR1NBQ8N0W7 255 aaPredicted RBP10.33□□□□□ -0.76
CLTCL1-211ENST00000621271 SLC26A7Q8TE54 656 aa10.33□□□□□ -0.76
CLTCL1-211ENST00000621271 WHAMMQ8TF30 809 aa10.33□□□□□ -0.76
CLTCL1-211ENST00000621271 KCNH7Q9NS40 1196 aa10.33□□□□□ -0.76
CLTCL1-211ENST00000621271 ARHGAP10A1A4S6 786 aa10.32□□□□□ -0.76
CLTCL1-211ENST00000621271 C3orf70A6NLC5 250 aaPredicted RBP10.32□□□□□ -0.76
CLTCL1-211ENST00000621271 LRRC53A6NM62 1247 aa10.32□□□□□ -0.76
CLTCL1-211ENST00000621271 RPSAP08865 295 aaKnown RBP10.32□□□□□ -0.76
CLTCL1-211ENST00000621271 SRGNP10124 158 aa10.32□□□□□ -0.76
CLTCL1-211ENST00000621271 CHRNA3P32297 505 aa10.32□□□□□ -0.76
CLTCL1-211ENST00000621271 VCPP55072 806 aaKnown RBP10.32□□□□□ -0.76
CLTCL1-211ENST00000621271 KDELC2Q7Z4H8 507 aa10.32□□□□□ -0.76
CLTCL1-211ENST00000621271 GLIS2Q9BZE0 524 aaPredicted RBP10.32□□□□□ -0.76
CLTCL1-211ENST00000621271 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.32□□□□□ -0.761e-15■■■■■ 72.7
CLTCL1-211ENST00000621271 WDR91A4D1P6 747 aa10.32□□□□□ -0.76
CLTCL1-211ENST00000621271 NKRFO15226 690 aaKnown RBP eCLIP10.32□□□□□ -0.76
CLTCL1-211ENST00000621271 PDGFRAP16234 1089 aa10.32□□□□□ -0.76
CLTCL1-211ENST00000621271 CASP1P29466 404 aa10.32□□□□□ -0.76
CLTCL1-211ENST00000621271 GNL1P36915 607 aaPredicted RBP10.32□□□□□ -0.76
CLTCL1-211ENST00000621271 CCNYL1Q8N7R7 359 aa10.32□□□□□ -0.76
CLTCL1-211ENST00000621271 SOCS4Q8WXH5 440 aa10.32□□□□□ -0.76
CLTCL1-211ENST00000621271 MFSD1Q9H3U5 465 aa10.32□□□□□ -0.76
CLTCL1-211ENST00000621271 GOLPH3LQ9H4A5 285 aa10.32□□□□□ -0.76
CLTCL1-211ENST00000621271 CNOT10Q9H9A5 744 aaKnown RBP10.32□□□□□ -0.76
CLTCL1-211ENST00000621271 FBXL21Q9UKT6 434 aa10.32□□□□□ -0.76
CLTCL1-211ENST00000621271 AP3B1O00203 1094 aa10.32□□□□□ -0.76
CLTCL1-211ENST00000621271 CFLARO15519 480 aa10.32□□□□□ -0.76
CLTCL1-211ENST00000621271 PYGLP06737 847 aa10.32□□□□□ -0.76
CLTCL1-211ENST00000621271 NBPF12Q5TAG4 269 aaPredicted RBP10.32□□□□□ -0.76
CLTCL1-211ENST00000621271 FRMD5Q7Z6J6 570 aa10.32□□□□□ -0.76
CLTCL1-211ENST00000621271 ZNF512BQ96KM6 892 aaPredicted RBP10.32□□□□□ -0.76
CLTCL1-211ENST00000621271 ZCCHC17Q9NP64 241 aaKnown RBP10.32□□□□□ -0.76
CLTCL1-211ENST00000621271 DEPDC5O75140 1603 aa10.32□□□□□ -0.76
CLTCL1-211ENST00000621271 IGSF9BQ9UPX0 1349 aa10.32□□□□□ -0.76
CLTCL1-211ENST00000621271 FRMD3A2A2Y4 597 aa10.32□□□□□ -0.76
CLTCL1-211ENST00000621271 PRR23AA6NEV1 266 aa10.32□□□□□ -0.76
CLTCL1-211ENST00000621271 ACSL3O95573 720 aa10.32□□□□□ -0.76
CLTCL1-211ENST00000621271 ATP2C1P98194 919 aaPredicted RBP10.32□□□□□ -0.76
CLTCL1-211ENST00000621271 DEUP1Q05D60 604 aa10.32□□□□□ -0.76
CLTCL1-211ENST00000621271 LAMB3Q13751 1172 aa10.32□□□□□ -0.76
CLTCL1-211ENST00000621271 PPHLN1Q8NEY8 458 aaKnown RBP10.32□□□□□ -0.76
CLTCL1-211ENST00000621271 SLC7A14Q8TBB6 771 aa10.32□□□□□ -0.76
CLTCL1-211ENST00000621271 FAM49BQ9NUQ9 324 aa10.32□□□□□ -0.76
CLTCL1-211ENST00000621271 PDS5AQ29RF7 1337 aaKnown RBP10.32□□□□□ -0.76
CLTCL1-211ENST00000621271 H0Y626 953 aa10.31□□□□□ -0.76
CLTCL1-211ENST00000621271 GOLGA8MH3BSY2 632 aa10.31□□□□□ -0.76
CLTCL1-211ENST00000621271 CXCL11O14625 94 aa10.31□□□□□ -0.76
CLTCL1-211ENST00000621271 CTIFO43310 598 aaKnown RBP10.31□□□□□ -0.76
CLTCL1-211ENST00000621271 SCP2P22307 547 aa10.31□□□□□ -0.76
CLTCL1-211ENST00000621271 SSTR3P32745 418 aaPredicted RBP10.31□□□□□ -0.76
CLTCL1-211ENST00000621271 AVPR1AP37288 418 aa10.31□□□□□ -0.76
CLTCL1-211ENST00000621271 SLC11A2P49281 568 aa10.31□□□□□ -0.76
CLTCL1-211ENST00000621271 ACTR2P61160 394 aa10.31□□□□□ -0.76
CLTCL1-211ENST00000621271 SEMA3FQ13275 785 aa10.31□□□□□ -0.76
CLTCL1-211ENST00000621271 NBPF9Q3BBW0 867 aa10.31□□□□□ -0.76
CLTCL1-211ENST00000621271 USP50Q70EL3 339 aaPredicted RBP10.31□□□□□ -0.76
CLTCL1-211ENST00000621271 DHX40Q8IX18 779 aaKnown RBP10.31□□□□□ -0.76
CLTCL1-211ENST00000621271 ZMYND12Q9H0C1 365 aa10.31□□□□□ -0.76
CLTCL1-211ENST00000621271 UPF3AQ9H1J1 476 aaKnown RBP10.31□□□□□ -0.76
CLTCL1-211ENST00000621271 CATSPERBQ9H7T0 1116 aa10.31□□□□□ -0.76
CLTCL1-211ENST00000621271 SLC25A13Q9UJS0 675 aa10.31□□□□□ -0.76
CLTCL1-211ENST00000621271 FAM200BP0CF97 657 aa10.31□□□□□ -0.76
CLTCL1-211ENST00000621271 SNRNP35Q16560 246 aaKnown RBP10.31□□□□□ -0.76
CLTCL1-211ENST00000621271 DEFB115Q30KQ5 88 aa10.31□□□□□ -0.76
CLTCL1-211ENST00000621271 RASSF3Q86WH2 238 aa10.31□□□□□ -0.76
CLTCL1-211ENST00000621271 CRLF3Q8IUI8 442 aa10.31□□□□□ -0.76
CLTCL1-211ENST00000621271 FBXO16Q8IX29 292 aaPredicted RBP10.31□□□□□ -0.76
CLTCL1-211ENST00000621271 ZDHHC15Q96MV8 337 aa10.31□□□□□ -0.76
CLTCL1-211ENST00000621271 FHDC1Q9C0D6 1143 aaPredicted RBP10.31□□□□□ -0.76
CLTCL1-211ENST00000621271 KDM4CQ9H3R0 1056 aa10.31□□□□□ -0.76
CLTCL1-211ENST00000621271 ANKEF1Q9NU02 776 aa10.31□□□□□ -0.76
CLTCL1-211ENST00000621271 POLLQ9UGP5 575 aa10.31□□□□□ -0.76
CLTCL1-211ENST00000621271 CCDC85CA6NKD9 419 aa10.31□□□□□ -0.76
CLTCL1-211ENST00000621271 ATP9BO43861 1147 aa10.31□□□□□ -0.76
CLTCL1-211ENST00000621271 ALDH1A2O94788 518 aa10.31□□□□□ -0.76
CLTCL1-211ENST00000621271 KLHL38Q2WGJ6 581 aa10.31□□□□□ -0.76
CLTCL1-211ENST00000621271 DDX27Q96GQ7 796 aaKnown RBP10.31□□□□□ -0.76
CLTCL1-211ENST00000621271 LATS2Q9NRM7 1088 aa10.31□□□□□ -0.76
CLTCL1-211ENST00000621271 FBXO28Q9NVF7 368 aa10.31□□□□□ -0.76
CLTCL1-211ENST00000621271 TTC7AQ9ULT0 858 aaPredicted RBP10.31□□□□□ -0.76
CLTCL1-211ENST00000621271 MBL2P11226 248 aaPredicted RBP10.31□□□□□ -0.76
CLTCL1-211ENST00000621271 TMPRSS15P98073 1019 aa10.31□□□□□ -0.76
CLTCL1-211ENST00000621271 ELAVL2Q12926 359 aaKnown RBP10.31□□□□□ -0.76
CLTCL1-211ENST00000621271 WDR75Q8IWA0 830 aaKnown RBP10.31□□□□□ -0.76
CLTCL1-211ENST00000621271 LRRC43Q8N309 656 aa10.31□□□□□ -0.76
CLTCL1-211ENST00000621271 MORC4Q8TE76 937 aa10.31□□□□□ -0.76
CLTCL1-211ENST00000621271 MAML1Q92585 1016 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms