RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 BBOF1Q8ND07 529 aa20.81■□□□□ 0.92
PDLIM3-212ENST00000620787 CCDC127Q96BQ5 260 aa20.81■□□□□ 0.92
PDLIM3-212ENST00000620787 FAM118BQ9BPY3 351 aa20.81■□□□□ 0.92
PDLIM3-212ENST00000620787 ST6GALNAC4Q9H4F1 302 aa20.81■□□□□ 0.92
PDLIM3-212ENST00000620787 TMEM8AQ9HCN3 771 aa20.81■□□□□ 0.92
PDLIM3-212ENST00000620787 AVENQ9NQS1 362 aaPredicted RBP20.81■□□□□ 0.92
PDLIM3-212ENST00000620787 TOPORSQ9NS56 1045 aaPredicted RBP20.81■□□□□ 0.92
PDLIM3-212ENST00000620787 ZHX2Q9Y6X8 837 aa20.81■□□□□ 0.92
PDLIM3-212ENST00000620787 SLC16A4O15374 487 aa20.81■□□□□ 0.92
PDLIM3-212ENST00000620787 ATP5HO75947 161 aa20.81■□□□□ 0.92
PDLIM3-212ENST00000620787 UNGP13051 313 aaPredicted RBP20.81■□□□□ 0.92
PDLIM3-212ENST00000620787 ADSSP30520 456 aa20.81■□□□□ 0.92
PDLIM3-212ENST00000620787 SLC1A1P43005 524 aa20.81■□□□□ 0.92
PDLIM3-212ENST00000620787 CCNHP51946 323 aaPredicted RBP20.81■□□□□ 0.92
PDLIM3-212ENST00000620787 GRIK3Q13003 919 aa20.81■□□□□ 0.92
PDLIM3-212ENST00000620787 TBC1D10BQ4KMP7 808 aaPredicted RBP20.81■□□□□ 0.92
PDLIM3-212ENST00000620787 DAB2IPQ5VWQ8 1189 aa20.81■□□□□ 0.92
PDLIM3-212ENST00000620787 MIS18BP1Q6P0N0 1132 aa20.81■□□□□ 0.92
PDLIM3-212ENST00000620787 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.81■□□□□ 0.92
PDLIM3-212ENST00000620787 TAS1R2Q8TE23 839 aa20.81■□□□□ 0.92
PDLIM3-212ENST00000620787 DENND1AQ8TEH3 1009 aa20.81■□□□□ 0.92
PDLIM3-212ENST00000620787 PARD3BQ8TEW8 1205 aa20.81■□□□□ 0.92
PDLIM3-212ENST00000620787 SPOCK2Q92563 424 aa20.81■□□□□ 0.92
PDLIM3-212ENST00000620787 PAIP2Q9BPZ3 127 aaKnown RBP20.81■□□□□ 0.92
PDLIM3-212ENST00000620787 THSD7AQ9UPZ6 1657 aa20.81■□□□□ 0.92
PDLIM3-212ENST00000620787 SCN9AQ15858 1988 aa20.8■□□□□ 0.92
PDLIM3-212ENST00000620787 RGPD3A6NKT7 1758 aaPredicted RBP20.8■□□□□ 0.92
PDLIM3-212ENST00000620787 RGPD4Q7Z3J3 1758 aa20.8■□□□□ 0.92
PDLIM3-212ENST00000620787 G3V3G9 751 aa20.8■□□□□ 0.92
PDLIM3-212ENST00000620787 SPAG7O75391 227 aa20.8■□□□□ 0.92
PDLIM3-212ENST00000620787 NPM3O75607 178 aaKnown RBP20.8■□□□□ 0.92
PDLIM3-212ENST00000620787 P4HBP07237 508 aaKnown RBP20.8■□□□□ 0.92
PDLIM3-212ENST00000620787 MAGEA4P43358 317 aa20.8■□□□□ 0.92
PDLIM3-212ENST00000620787 DNAJC3Q13217 504 aa20.8■□□□□ 0.92
PDLIM3-212ENST00000620787 SETDB1Q15047 1291 aa20.8■□□□□ 0.92
PDLIM3-212ENST00000620787 DCAF8Q5TAQ9 597 aa20.8■□□□□ 0.92
PDLIM3-212ENST00000620787 CAPRIN2Q6IMN6 1127 aaKnown RBP20.8■□□□□ 0.92
PDLIM3-212ENST00000620787 LLGL2Q6P1M3 1020 aa20.8■□□□□ 0.92
PDLIM3-212ENST00000620787 ZNF365Q70YC5 407 aa20.8■□□□□ 0.92
PDLIM3-212ENST00000620787 PHLDB2Q86SQ0 1253 aa20.8■□□□□ 0.92
PDLIM3-212ENST00000620787 AGGF1Q8N302 714 aaeCLIP20.8■□□□□ 0.92
PDLIM3-212ENST00000620787 CCDC89Q8N998 374 aa20.8■□□□□ 0.92
PDLIM3-212ENST00000620787 SAAL1Q96ER3 474 aa20.8■□□□□ 0.92
PDLIM3-212ENST00000620787 ANKRD27Q96NW4 1050 aa20.8■□□□□ 0.92
PDLIM3-212ENST00000620787 TMEM237Q96Q45 408 aa20.8■□□□□ 0.92
PDLIM3-212ENST00000620787 MXRA8Q9BRK3 442 aa20.8■□□□□ 0.92
PDLIM3-212ENST00000620787 MRIQ9BWK5 157 aa20.8■□□□□ 0.92
PDLIM3-212ENST00000620787 PKD2L1Q9P0L9 805 aa20.8■□□□□ 0.92
PDLIM3-212ENST00000620787 PHTF1Q9UMS5 762 aa20.8■□□□□ 0.92
PDLIM3-212ENST00000620787 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.8■□□□□ 0.92
PDLIM3-212ENST00000620787 USH1CQ9Y6N9 552 aa20.8■□□□□ 0.92
PDLIM3-212ENST00000620787 PEX11AO75192 247 aa20.8■□□□□ 0.92
PDLIM3-212ENST00000620787 TARSP26639 723 aaKnown RBP20.8■□□□□ 0.92
PDLIM3-212ENST00000620787 PTP4A2Q12974 167 aa20.8■□□□□ 0.92
PDLIM3-212ENST00000620787 TAF11Q15544 211 aa20.8■□□□□ 0.92
PDLIM3-212ENST00000620787 CCNG2Q16589 344 aa20.8■□□□□ 0.92
PDLIM3-212ENST00000620787 CYP4F22Q6NT55 531 aa20.8■□□□□ 0.92
PDLIM3-212ENST00000620787 VSIG1Q86XK7 387 aa20.8■□□□□ 0.92
PDLIM3-212ENST00000620787 RANBP17Q9H2T7 1088 aaKnown RBP20.8■□□□□ 0.92
PDLIM3-212ENST00000620787 DBNDD1Q9H9R9 158 aa20.8■□□□□ 0.92
PDLIM3-212ENST00000620787 RNPEPL1Q9HAU8 725 aa20.8■□□□□ 0.92
PDLIM3-212ENST00000620787 CORO1CQ9ULV4 474 aaPredicted RBP20.8■□□□□ 0.92
PDLIM3-212ENST00000620787 UMODL1Q5DID0 1318 aa20.79■□□□□ 0.92
PDLIM3-212ENST00000620787 ITGB5P18084 799 aa20.79■□□□□ 0.92
PDLIM3-212ENST00000620787 KLRC2P26717 231 aa20.79■□□□□ 0.92
PDLIM3-212ENST00000620787 RGS9BPQ6ZS82 235 aa20.79■□□□□ 0.92
PDLIM3-212ENST00000620787 ZCCHC9Q8N567 271 aaKnown RBP20.79■□□□□ 0.92
PDLIM3-212ENST00000620787 FBXL13Q8NEE6 735 aa20.79■□□□□ 0.92
PDLIM3-212ENST00000620787 MICAL1Q8TDZ2 1067 aa20.79■□□□□ 0.92
PDLIM3-212ENST00000620787 RBM15Q96T37 977 aaKnown RBP eCLIP20.79■□□□□ 0.92
PDLIM3-212ENST00000620787 SH2D3AQ9BRG2 576 aa20.79■□□□□ 0.92
PDLIM3-212ENST00000620787 RAB20Q9NX57 234 aa20.79■□□□□ 0.92
PDLIM3-212ENST00000620787 HAO1Q9UJM8 370 aa20.79■□□□□ 0.92
PDLIM3-212ENST00000620787 GRID1Q9ULK0 1009 aa20.79■□□□□ 0.92
PDLIM3-212ENST00000620787 GSTTP1A0A1W2PQM5 241 aa20.79■□□□□ 0.92
PDLIM3-212ENST00000620787 CLGNO14967 610 aa20.79■□□□□ 0.92
PDLIM3-212ENST00000620787 PPP1R12AO14974 1030 aaPredicted RBP20.79■□□□□ 0.92
PDLIM3-212ENST00000620787 PRPF4O43172 522 aaKnown RBP eCLIP20.79■□□□□ 0.92
PDLIM3-212ENST00000620787 FDX1P10109 184 aa20.79■□□□□ 0.92
PDLIM3-212ENST00000620787 KRT5P13647 590 aa20.79■□□□□ 0.92
PDLIM3-212ENST00000620787 NCKAP1LP55160 1127 aa20.79■□□□□ 0.92
PDLIM3-212ENST00000620787 PEX3P56589 373 aa20.79■□□□□ 0.92
PDLIM3-212ENST00000620787 GRIPAP1Q4V328 841 aa20.79■□□□□ 0.92
PDLIM3-212ENST00000620787 NAF1Q96HR8 494 aaKnown RBP20.79■□□□□ 0.92
PDLIM3-212ENST00000620787 SLCO1B3Q9NPD5 702 aa20.79■□□□□ 0.92
PDLIM3-212ENST00000620787 UBN1Q9NPG3 1134 aa20.79■□□□□ 0.92
PDLIM3-212ENST00000620787 GPRC5CQ9NQ84 441 aa20.79■□□□□ 0.92
PDLIM3-212ENST00000620787 SYNPO2Q9UMS6 1093 aa20.79■□□□□ 0.92
PDLIM3-212ENST00000620787 MRPL11Q9Y3B7 192 aaKnown RBP20.79■□□□□ 0.92
PDLIM3-212ENST00000620787 MYPNQ86TC9 1320 aa20.78■□□□□ 0.92
PDLIM3-212ENST00000620787 LUC7L3O95232 432 aaKnown RBP20.78■□□□□ 0.92
PDLIM3-212ENST00000620787 NR1H3Q13133 447 aa20.78■□□□□ 0.92
PDLIM3-212ENST00000620787 NAIF1Q69YI7 327 aaPredicted RBP20.78■□□□□ 0.92
PDLIM3-212ENST00000620787 SLC17A8Q8NDX2 589 aa20.78■□□□□ 0.92
PDLIM3-212ENST00000620787 INPP5DQ92835 1189 aa20.78■□□□□ 0.92
PDLIM3-212ENST00000620787 FAM81BQ96LP2 452 aa20.78■□□□□ 0.92
PDLIM3-212ENST00000620787 LRRC37BQ96QE4 947 aa20.78■□□□□ 0.92
PDLIM3-212ENST00000620787 KIAA1683Q9H0B3 1180 aa20.78■□□□□ 0.92
PDLIM3-212ENST00000620787 EXOC1LA0A1B0GW35 172 aa20.78■□□□□ 0.92
PDLIM3-212ENST00000620787 TMEM150BA6NC51 233 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms