RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 CLP1Q92989 425 aaKnown RBP14.77□□□□□ -0.05
NEK3-210ENST00000620675 CGRRF1Q99675 332 aa14.77□□□□□ -0.05
NEK3-210ENST00000620675 MKNK1Q9BUB5 465 aa14.77□□□□□ -0.05
NEK3-210ENST00000620675 INTS13Q9NVM9 706 aa14.77□□□□□ -0.05
NEK3-210ENST00000620675 RNF216Q9NWF9 866 aaPredicted RBP14.77□□□□□ -0.05
NEK3-210ENST00000620675 SIX4Q9UIU6 781 aa14.77□□□□□ -0.05
NEK3-210ENST00000620675 EPOPA6NHQ4 379 aa14.76□□□□□ -0.05
NEK3-210ENST00000620675 SLC16A3O15427 465 aaKnown RBP14.76□□□□□ -0.05
NEK3-210ENST00000620675 TNNI1P19237 187 aa14.76□□□□□ -0.05
NEK3-210ENST00000620675 OR1G1P47890 313 aa14.76□□□□□ -0.05
NEK3-210ENST00000620675 GCLMP48507 274 aa14.76□□□□□ -0.05
NEK3-210ENST00000620675 ZNF445P59923 1031 aa14.76□□□□□ -0.05
NEK3-210ENST00000620675 TUSC3Q13454 348 aa14.76□□□□□ -0.05
NEK3-210ENST00000620675 CCDC40Q4G0X9 1142 aa14.76□□□□□ -0.05
NEK3-210ENST00000620675 DCAF17Q5H9S7 520 aaPredicted RBP14.76□□□□□ -0.05
NEK3-210ENST00000620675 CT47A1Q5JQC4 288 aaPredicted RBP14.76□□□□□ -0.05
NEK3-210ENST00000620675 SLC35C1Q96A29 364 aa14.76□□□□□ -0.05
NEK3-210ENST00000620675 FNBP1Q96RU3 617 aa14.76□□□□□ -0.05
NEK3-210ENST00000620675 MRPL9Q9BYD2 267 aaKnown RBP14.76□□□□□ -0.05
NEK3-210ENST00000620675 KANSL3Q9P2N6 904 aa14.76□□□□□ -0.05
NEK3-210ENST00000620675 ARMCX3Q9UH62 379 aaPredicted RBP14.76□□□□□ -0.05
NEK3-210ENST00000620675 C2CD2Q9Y426 696 aa14.76□□□□□ -0.05
NEK3-210ENST00000620675 BRWD1Q9NSI6 2320 aa14.76□□□□□ -0.05
NEK3-210ENST00000620675 C5orf42Q9H799 3197 aa14.75□□□□□ -0.05
NEK3-210ENST00000620675 NRP1O14786 923 aa14.75□□□□□ -0.05
NEK3-210ENST00000620675 MAPK13O15264 365 aa14.75□□□□□ -0.05
NEK3-210ENST00000620675 KIF4AO95239 1232 aa14.75□□□□□ -0.05
NEK3-210ENST00000620675 ATP1A3P13637 1013 aa14.75□□□□□ -0.05
NEK3-210ENST00000620675 CLDN10P78369 228 aa14.75□□□□□ -0.05
NEK3-210ENST00000620675 SMAD3P84022 425 aaKnown RBP14.75□□□□□ -0.05
NEK3-210ENST00000620675 POU5F1Q01860 360 aaKnown RBP14.75□□□□□ -0.05
NEK3-210ENST00000620675 CDKAL1Q5VV42 579 aa14.75□□□□□ -0.05
NEK3-210ENST00000620675 TDRD10Q5VZ19 366 aaKnown RBP14.75□□□□□ -0.05
NEK3-210ENST00000620675 KCNT2Q6UVM3 1135 aa14.75□□□□□ -0.05
NEK3-210ENST00000620675 INTS8Q75QN2 995 aaKnown RBP14.75□□□□□ -0.05
NEK3-210ENST00000620675 COLGALT1Q8NBJ5 622 aa14.75□□□□□ -0.05
NEK3-210ENST00000620675 RNF214Q8ND24 703 aa14.75□□□□□ -0.05
NEK3-210ENST00000620675 FAM193BQ96PV7 902 aaPredicted RBP14.75□□□□□ -0.05
NEK3-210ENST00000620675 TSPY26PQ9H489 355 aa14.75□□□□□ -0.05
NEK3-210ENST00000620675 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.75□□□□□ -0.05
NEK3-210ENST00000620675 MARCH5Q9NX47 278 aa14.75□□□□□ -0.05
NEK3-210ENST00000620675 DPP3Q9NY33 737 aa14.75□□□□□ -0.05
NEK3-210ENST00000620675 A0A1W2PPC1 479 aa14.75□□□□□ -0.05
NEK3-210ENST00000620675 CST3P01034 146 aaPredicted RBP14.75□□□□□ -0.05
NEK3-210ENST00000620675 UPP1Q16831 310 aa14.75□□□□□ -0.05
NEK3-210ENST00000620675 CBWD6Q4V339 395 aa14.75□□□□□ -0.05
NEK3-210ENST00000620675 CBWD3Q5JTY5 395 aa14.75□□□□□ -0.05
NEK3-210ENST00000620675 CBWD5Q5RIA9 395 aa14.75□□□□□ -0.05
NEK3-210ENST00000620675 TCERG1LQ5VWI1 586 aa14.75□□□□□ -0.05
NEK3-210ENST00000620675 PPP2R2DQ66LE6 453 aa14.75□□□□□ -0.05
NEK3-210ENST00000620675 WDR49Q8IV35 697 aa14.75□□□□□ -0.05
NEK3-210ENST00000620675 TRIM59Q8IWR1 403 aa14.75□□□□□ -0.05
NEK3-210ENST00000620675 CD302Q8IX05 232 aa14.75□□□□□ -0.05
NEK3-210ENST00000620675 TMC2Q8TDI7 906 aa14.75□□□□□ -0.05
NEK3-210ENST00000620675 TIFAQ96CG3 184 aa14.75□□□□□ -0.05
NEK3-210ENST00000620675 BPIFA3Q9BQP9 254 aa14.75□□□□□ -0.05
NEK3-210ENST00000620675 VN1R3Q9BXE9 311 aa14.75□□□□□ -0.05
NEK3-210ENST00000620675 MSRAQ9UJ68 235 aa14.75□□□□□ -0.05
NEK3-210ENST00000620675 UBQLN1Q9UMX0 589 aaKnown RBP14.75□□□□□ -0.05
NEK3-210ENST00000620675 TSC2P49815 1807 aa14.75□□□□□ -0.05
NEK3-210ENST00000620675 I3L4J1 428 aa14.74□□□□□ -0.05
NEK3-210ENST00000620675 RFXAPO00287 272 aa14.74□□□□□ -0.05
NEK3-210ENST00000620675 CSPG5O95196 566 aa14.74□□□□□ -0.05
NEK3-210ENST00000620675 VNN1O95497 513 aa14.74□□□□□ -0.05
NEK3-210ENST00000620675 C4BPAP04003 597 aaKnown RBP14.74□□□□□ -0.05
NEK3-210ENST00000620675 ITGB3P05106 788 aa14.74□□□□□ -0.05
NEK3-210ENST00000620675 TMEM191BP0C7N4 346 aa14.74□□□□□ -0.05
NEK3-210ENST00000620675 MCCD1P59942 119 aaPredicted RBP14.74□□□□□ -0.05
NEK3-210ENST00000620675 C9orf57Q5W0N0 161 aa14.74□□□□□ -0.05
NEK3-210ENST00000620675 TRAPPC11Q7Z392 1133 aa14.74□□□□□ -0.05
NEK3-210ENST00000620675 FRMD5Q7Z6J6 570 aa14.74□□□□□ -0.05
NEK3-210ENST00000620675 THAP9Q9H5L6 903 aa14.74□□□□□ -0.05
NEK3-210ENST00000620675 KCNJ18B7U540 433 aa14.73□□□□□ -0.05
NEK3-210ENST00000620675 PODXLO00592 558 aa14.73□□□□□ -0.05
NEK3-210ENST00000620675 SPTLC1O15269 473 aa14.73□□□□□ -0.05
NEK3-210ENST00000620675 KRT13P13646 458 aa14.73□□□□□ -0.05
NEK3-210ENST00000620675 ZNF18P17022 549 aa14.73□□□□□ -0.05
NEK3-210ENST00000620675 POLR2BP30876 1174 aaKnown RBP14.73□□□□□ -0.05
NEK3-210ENST00000620675 CTNNB1P35222 781 aa14.73□□□□□ -0.05
NEK3-210ENST00000620675 BRCC3P46736 316 aa14.73□□□□□ -0.05
NEK3-210ENST00000620675 MARSP56192 900 aaKnown RBP14.73□□□□□ -0.05
NEK3-210ENST00000620675 KCNJ12Q14500 433 aa14.73□□□□□ -0.05
NEK3-210ENST00000620675 RAB30Q15771 203 aa14.73□□□□□ -0.05
NEK3-210ENST00000620675 DUOXA2Q1HG44 320 aa14.73□□□□□ -0.05
NEK3-210ENST00000620675 EPC2Q52LR7 807 aa14.73□□□□□ -0.05
NEK3-210ENST00000620675 SV2AQ7L0J3 742 aa14.73□□□□□ -0.05
NEK3-210ENST00000620675 B3GALT6Q96L58 329 aa14.73□□□□□ -0.05
NEK3-210ENST00000620675 NAT10Q9H0A0 1025 aaKnown RBP14.73□□□□□ -0.05
NEK3-210ENST00000620675 TTYH1Q9H313 450 aaPredicted RBP14.73□□□□□ -0.05
NEK3-210ENST00000620675 ALG13Q9NP73 1137 aaKnown RBP14.73□□□□□ -0.05
NEK3-210ENST00000620675 DERAQ9Y315 318 aa14.73□□□□□ -0.05
NEK3-210ENST00000620675 ANO9A1A5B4 782 aa14.73□□□□□ -0.05
NEK3-210ENST00000620675 IKBKBO14920 756 aa14.73□□□□□ -0.05
NEK3-210ENST00000620675 LRPAP1P30533 357 aa14.73□□□□□ -0.05
NEK3-210ENST00000620675 BMPR1AP36894 532 aa14.73□□□□□ -0.05
NEK3-210ENST00000620675 TCP11X2Q5H9J9 407 aa14.73□□□□□ -0.05
NEK3-210ENST00000620675 C15orf39Q6ZRI6 1047 aa14.73□□□□□ -0.05
NEK3-210ENST00000620675 TAS1R1Q7RTX1 841 aa14.73□□□□□ -0.05
NEK3-210ENST00000620675 SLC39A11Q8N1S5 342 aa14.73□□□□□ -0.05
NEK3-210ENST00000620675 KLHL23Q8NBE8 558 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 188.1 ms