RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, human

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ALMS1-208	ENST00000620466	SLC13A4	Q9UKG4	626 aa		8.82	□□□□□ -1
ALMS1-208	ENST00000620466	CFAP69	A5D8W1	941 aa		8.81	□□□□□ -1
ALMS1-208	ENST00000620466	HNRNPCL2	B2RXH8	293 aa		8.81	□□□□□ -1
ALMS1-208	ENST00000620466	FOXP2	O15409	715 aa		8.81	□□□□□ -1
ALMS1-208	ENST00000620466	HNRNPCL1	O60812	293 aa	Known RBP	8.81	□□□□□ -1
ALMS1-208	ENST00000620466	KRT38	O76015	456 aa		8.81	□□□□□ -1
ALMS1-208	ENST00000620466	SGPL1	O95470	568 aa		8.81	□□□□□ -1
ALMS1-208	ENST00000620466	HSPA4L	O95757	839 aa		8.81	□□□□□ -1
ALMS1-208	ENST00000620466	HIF1A	Q16665	826 aa		8.81	□□□□□ -1
ALMS1-208	ENST00000620466	ZBTB41	Q5SVQ8	909 aa		8.81	□□□□□ -1
ALMS1-208	ENST00000620466	STRIP1	Q5VSL9	837 aa		8.81	□□□□□ -1
ALMS1-208	ENST00000620466	TRIM67	Q6ZTA4	783 aa		8.81	□□□□□ -1
ALMS1-208	ENST00000620466	LONP2	Q86WA8	852 aa		8.81	□□□□□ -1
ALMS1-208	ENST00000620466	FGD4	Q96M96	766 aa		8.81	□□□□□ -1
ALMS1-208	ENST00000620466	MRPL4	Q9BYD3	311 aa	Known RBP	8.81	□□□□□ -1
ALMS1-208	ENST00000620466	CD248	Q9HCU0	757 aa		8.81	□□□□□ -1
ALMS1-208	ENST00000620466	SPATA31A5	Q5VU36	1347 aa		8.81	□□□□□ -1
ALMS1-208	ENST00000620466	SPATA31A7	Q8IWB4	1347 aa		8.81	□□□□□ -1
ALMS1-208	ENST00000620466	ATRN	O75882	1429 aa		8.81	□□□□□ -1
ALMS1-208	ENST00000620466	CFLAR	O15519	480 aa		8.81	□□□□□ -1
ALMS1-208	ENST00000620466	PPFIA2	O75334	1257 aa		8.81	□□□□□ -1
ALMS1-208	ENST00000620466	ESRRB	O95718	433 aa		8.81	□□□□□ -1
ALMS1-208	ENST00000620466	PPARG	P37231	505 aa	Predicted RBP	8.81	□□□□□ -1
ALMS1-208	ENST00000620466	MEA1	Q16626	185 aa		8.81	□□□□□ -1
ALMS1-208	ENST00000620466	ZNF668	Q96K58	619 aa	Predicted RBP	8.81	□□□□□ -1
ALMS1-208	ENST00000620466	C9orf72	Q96LT7	481 aa		8.81	□□□□□ -1
ALMS1-208	ENST00000620466	SMYD3	Q9H7B4	428 aa		8.81	□□□□□ -1
ALMS1-208	ENST00000620466	AFDN	P55196	1824 aa	Known RBP	8.81	□□□□□ -1
ALMS1-208	ENST00000620466	KIF1A	Q12756	1690 aa		8.81	□□□□□ -1
ALMS1-208	ENST00000620466	ARHGAP23	Q9P227	1491 aa		8.81	□□□□□ -1
ALMS1-208	ENST00000620466	ACOT2	P49753	483 aa		8.81	□□□□□ -1
ALMS1-208	ENST00000620466		Q4G0T1	1027 aa		8.81	□□□□□ -1
ALMS1-208	ENST00000620466	FASTKD5	Q7L8L6	764 aa	Known RBP	8.81	□□□□□ -1
ALMS1-208	ENST00000620466	RASSF3	Q86WH2	238 aa		8.81	□□□□□ -1
ALMS1-208	ENST00000620466	COL23A1	Q86Y22	540 aa	Predicted RBP	8.81	□□□□□ -1
ALMS1-208	ENST00000620466	HIPK4	Q8NE63	616 aa		8.81	□□□□□ -1
ALMS1-208	ENST00000620466	FAM167A	Q96KS9	214 aa		8.81	□□□□□ -1
ALMS1-208	ENST00000620466	TMEM8A	Q9HCN3	771 aa		8.81	□□□□□ -1
ALMS1-208	ENST00000620466	PRDM5	Q9NQX1	630 aa	Predicted RBP	8.81	□□□□□ -1
ALMS1-208	ENST00000620466	NEU2	Q9Y3R4	380 aa		8.81	□□□□□ -1
ALMS1-208	ENST00000620466	GOLGA8R	I6L899	631 aa		8.81	□□□□□ -1
ALMS1-208	ENST00000620466	NPEPPS	P55786	919 aa		8.81	□□□□□ -1
ALMS1-208	ENST00000620466	NOP14	P78316	857 aa	Known RBP	8.81	□□□□□ -1
ALMS1-208	ENST00000620466	TNFAIP2	Q03169	654 aa		8.81	□□□□□ -1
ALMS1-208	ENST00000620466	KIF19	Q2TAC6	998 aa		8.81	□□□□□ -1
ALMS1-208	ENST00000620466	SYCP2L	Q5T4T6	812 aa		8.81	□□□□□ -1
ALMS1-208	ENST00000620466	LRRC34	Q8IZ02	419 aa		8.81	□□□□□ -1
ALMS1-208	ENST00000620466	AFG1L	Q8WV93	481 aa		8.81	□□□□□ -1
ALMS1-208	ENST00000620466	TRIM15	Q9C019	465 aa		8.81	□□□□□ -1
ALMS1-208	ENST00000620466	ZHX2	Q9Y6X8	837 aa		8.81	□□□□□ -1
ALMS1-208	ENST00000620466	DPYSL4	O14531	572 aa		8.81	□□□□□ -1
ALMS1-208	ENST00000620466	P4HA2	O15460	535 aa		8.81	□□□□□ -1
ALMS1-208	ENST00000620466	SLC10A5	Q5PT55	438 aa		8.81	□□□□□ -1
ALMS1-208	ENST00000620466	C1orf146	Q5VVC0	180 aa		8.81	□□□□□ -1
ALMS1-208	ENST00000620466	C4orf33	Q8N1A6	199 aa		8.81	□□□□□ -1
ALMS1-208	ENST00000620466	FAM161B	Q96MY7	647 aa		8.81	□□□□□ -1
ALMS1-208	ENST00000620466	MCEE	Q96PE7	176 aa		8.81	□□□□□ -1
ALMS1-208	ENST00000620466	TSC22D3	Q99576	134 aa		8.81	□□□□□ -1
ALMS1-208	ENST00000620466	PI4K2A	Q9BTU6	479 aa		8.81	□□□□□ -1
ALMS1-208	ENST00000620466	SLC13A1	Q9BZW2	595 aa		8.81	□□□□□ -1
ALMS1-208	ENST00000620466	YIPF3	Q9GZM5	350 aa		8.81	□□□□□ -1
ALMS1-208	ENST00000620466	RIOX1	Q9H6W3	641 aa		8.81	□□□□□ -1
ALMS1-208	ENST00000620466	SLC24A3	Q9HC58	644 aa		8.81	□□□□□ -1
ALMS1-208	ENST00000620466	APOBEC2	Q9Y235	224 aa	Known RBP	8.81	□□□□□ -1
ALMS1-208	ENST00000620466	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	8.81	□□□□□ -1
ALMS1-208	ENST00000620466	SMIM22	K7EJ46	135 aa		8.8	□□□□□ -1
ALMS1-208	ENST00000620466	PPP1R12A	O14974	1030 aa	Predicted RBP	8.8	□□□□□ -1
ALMS1-208	ENST00000620466	FAM153B	P0C7A2	387 aa		8.8	□□□□□ -1
ALMS1-208	ENST00000620466	HSPA8	P11142	646 aa	Known RBP	8.8	□□□□□ -1
ALMS1-208	ENST00000620466	FAM153C	Q494X1	144 aa		8.8	□□□□□ -1
ALMS1-208	ENST00000620466	TMEM119	Q4V9L6	283 aa		8.8	□□□□□ -1
ALMS1-208	ENST00000620466	WDR75	Q8IWA0	830 aa	Known RBP	8.8	□□□□□ -1
ALMS1-208	ENST00000620466	DHX38	Q92620	1227 aa	Known RBP	8.8	□□□□□ -1
ALMS1-208	ENST00000620466	JPH1	Q9HDC5	661 aa	Predicted RBP	8.8	□□□□□ -1
ALMS1-208	ENST00000620466	NPHS2	Q9NP85	383 aa		8.8	□□□□□ -1
ALMS1-208	ENST00000620466	PIM2	Q9P1W9	311 aa		8.8	□□□□□ -1
ALMS1-208	ENST00000620466	STOML1	Q9UBI4	398 aa		8.8	□□□□□ -1
ALMS1-208	ENST00000620466	FAM153A	Q9UHL3	310 aa		8.8	□□□□□ -1
ALMS1-208	ENST00000620466	SMG5	Q9UPR3	1016 aa	Known RBP	8.8	□□□□□ -1
ALMS1-208	ENST00000620466	EIF3E	P60228	445 aa	Known RBP	8.8	□□□□□ -1
ALMS1-208	ENST00000620466	MAPK7	Q13164	816 aa		8.8	□□□□□ -1
ALMS1-208	ENST00000620466	ART3	Q13508	389 aa		8.8	□□□□□ -1
ALMS1-208	ENST00000620466	EPC2	Q52LR7	807 aa		8.8	□□□□□ -1
ALMS1-208	ENST00000620466	HABP4	Q5JVS0	413 aa	Known RBP	8.8	□□□□□ -1
ALMS1-208	ENST00000620466	RGS9BP	Q6ZS82	235 aa		8.8	□□□□□ -1
ALMS1-208	ENST00000620466	RFX8	Q6ZV50	586 aa		8.8	□□□□□ -1
ALMS1-208	ENST00000620466	SZRD1	Q7Z422	152 aa		8.8	□□□□□ -1
ALMS1-208	ENST00000620466	OSGEP	Q9NPF4	335 aa		8.8	□□□□□ -1
ALMS1-208	ENST00000620466	ANLN	Q9NQW6	1124 aa		8.8	□□□□□ -1
ALMS1-208	ENST00000620466	GDF3	Q9NR23	364 aa		8.8	□□□□□ -1
ALMS1-208	ENST00000620466		A0A0A6YYK5	440 aa	Predicted RBP	8.8	□□□□□ -1
ALMS1-208	ENST00000620466	AP3M2	P53677	418 aa		8.8	□□□□□ -1
ALMS1-208	ENST00000620466	CENPC	Q03188	943 aa		8.8	□□□□□ -1
ALMS1-208	ENST00000620466	KYNU	Q16719	465 aa		8.8	□□□□□ -1
ALMS1-208	ENST00000620466	CATSPER4	Q7RTX7	472 aa		8.8	□□□□□ -1
ALMS1-208	ENST00000620466	KIF2B	Q8N4N8	673 aa		8.8	□□□□□ -1
ALMS1-208	ENST00000620466	RBBP8NL	Q8NC74	664 aa	Predicted RBP	8.8	□□□□□ -1
ALMS1-208	ENST00000620466	WRNIP1	Q96S55	665 aa		8.8	□□□□□ -1
ALMS1-208	ENST00000620466	VCPKMT	Q9H867	229 aa		8.8	□□□□□ -1
ALMS1-208	ENST00000620466	AFF2	P51816	1311 aa		8.8	□□□□□ -1

Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms