RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 TMC6Q7Z403 805 aa8.67□□□□□ -1.02
CPNE3-209ENST00000620393 EFCAB13Q8IY85 973 aa8.67□□□□□ -1.02
CPNE3-209ENST00000620393 FBXL13Q8NEE6 735 aa8.67□□□□□ -1.02
CPNE3-209ENST00000620393 ANKRD36BP1Q96IX9 119 aa8.67□□□□□ -1.02
CPNE3-209ENST00000620393 PCMTD1Q96MG8 357 aaPredicted RBP8.67□□□□□ -1.02
CPNE3-209ENST00000620393 ZMAT2Q96NC0 199 aaKnown RBP8.67□□□□□ -1.02
CPNE3-209ENST00000620393 EDEM3Q9BZQ6 932 aa8.67□□□□□ -1.02
CPNE3-209ENST00000620393 CXCL16Q9H2A7 254 aa8.67□□□□□ -1.02
CPNE3-209ENST00000620393 PLCB1Q9NQ66 1216 aa8.67□□□□□ -1.02
CPNE3-209ENST00000620393 RAB20Q9NX57 234 aa8.67□□□□□ -1.02
CPNE3-209ENST00000620393 KLK14Q9P0G3 267 aa8.67□□□□□ -1.02
CPNE3-209ENST00000620393 IMPACTQ9P2X3 320 aa8.67□□□□□ -1.02
CPNE3-209ENST00000620393 PRKAG2Q9UGJ0 569 aa8.67□□□□□ -1.02
CPNE3-209ENST00000620393 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.67□□□□□ -1.02
CPNE3-209ENST00000620393 ABHD14A-ACY1A0A1B0GW23 586 aa8.66□□□□□ -1.02
CPNE3-209ENST00000620393 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.66□□□□□ -1.02
CPNE3-209ENST00000620393 MEIS3P2A8K0S8 358 aa8.66□□□□□ -1.02
CPNE3-209ENST00000620393 INPPL1O15357 1258 aa8.66□□□□□ -1.02
CPNE3-209ENST00000620393 XPOTO43592 962 aaKnown RBP8.66□□□□□ -1.02
CPNE3-209ENST00000620393 PHACTR2O75167 634 aa8.66□□□□□ -1.02
CPNE3-209ENST00000620393 OFD1O75665 1012 aa8.66□□□□□ -1.02
CPNE3-209ENST00000620393 NOL4O94818 638 aa8.66□□□□□ -1.02
CPNE3-209ENST00000620393 VNN1O95497 513 aa8.66□□□□□ -1.02
CPNE3-209ENST00000620393 CST3P01034 146 aaPredicted RBP8.66□□□□□ -1.02
CPNE3-209ENST00000620393 HLA-DRAP01903 254 aa8.66□□□□□ -1.02
CPNE3-209ENST00000620393 TNNC2P02585 160 aa8.66□□□□□ -1.02
CPNE3-209ENST00000620393 PFKMP08237 780 aa8.66□□□□□ -1.02
CPNE3-209ENST00000620393 NFICP08651 508 aa8.66□□□□□ -1.02
CPNE3-209ENST00000620393 TMEM191BP0C7N4 346 aa8.66□□□□□ -1.02
CPNE3-209ENST00000620393 CSF2RAP15509 400 aa8.66□□□□□ -1.02
CPNE3-209ENST00000620393 CYP3A5P20815 502 aa8.66□□□□□ -1.02
CPNE3-209ENST00000620393 KLK7P49862 253 aa8.66□□□□□ -1.02
CPNE3-209ENST00000620393 BIRC3Q13489 604 aa8.66□□□□□ -1.02
CPNE3-209ENST00000620393 KLHDC7AQ5VTJ3 777 aa8.66□□□□□ -1.02
CPNE3-209ENST00000620393 TDRD10Q5VZ19 366 aaKnown RBP8.66□□□□□ -1.02
CPNE3-209ENST00000620393 PPFIBP1Q86W92 1011 aa8.66□□□□□ -1.02
CPNE3-209ENST00000620393 CRIPAKQ8N1N5 446 aa8.66□□□□□ -1.02
CPNE3-209ENST00000620393 SPC24Q8NBT2 197 aa8.66□□□□□ -1.02
CPNE3-209ENST00000620393 RNF169Q8NCN4 708 aa8.66□□□□□ -1.02
CPNE3-209ENST00000620393 GSTCDQ8NEC7 633 aa8.66□□□□□ -1.02
CPNE3-209ENST00000620393 TAS1R2Q8TE23 839 aa8.66□□□□□ -1.02
CPNE3-209ENST00000620393 SEMA4DQ92854 862 aa8.66□□□□□ -1.02
CPNE3-209ENST00000620393 LPPQ93052 612 aa8.66□□□□□ -1.02
CPNE3-209ENST00000620393 IQCDQ96DY2 449 aa8.66□□□□□ -1.02
CPNE3-209ENST00000620393 FAM84AQ96KN4 292 aa8.66□□□□□ -1.02
CPNE3-209ENST00000620393 GAD1Q99259 594 aa8.66□□□□□ -1.02
CPNE3-209ENST00000620393 LSM14BQ9BX40 385 aaKnown RBP8.66□□□□□ -1.02
CPNE3-209ENST00000620393 INTS2Q9H0H0 1204 aaKnown RBP8.66□□□□□ -1.02
CPNE3-209ENST00000620393 RSAD1Q9HA92 442 aa8.66□□□□□ -1.02
CPNE3-209ENST00000620393 IL23AQ9NPF7 189 aa8.66□□□□□ -1.02
CPNE3-209ENST00000620393 TMEM161AQ9NX61 479 aa8.66□□□□□ -1.02
CPNE3-209ENST00000620393 MIOSQ9NXC5 875 aa8.66□□□□□ -1.02
CPNE3-209ENST00000620393 DPP3Q9NY33 737 aa8.66□□□□□ -1.02
CPNE3-209ENST00000620393 UBQLN1Q9UMX0 589 aaKnown RBP8.66□□□□□ -1.02
CPNE3-209ENST00000620393 PCDHB7Q9Y5E2 793 aa8.66□□□□□ -1.02
CPNE3-209ENST00000620393 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.66□□□□□ -1.02
CPNE3-209ENST00000620393 FRMPD3Q5JV73 1810 aa8.66□□□□□ -1.02
CPNE3-209ENST00000620393 DNAH12Q6ZR08 3092 aa8.65□□□□□ -1.02
CPNE3-209ENST00000620393 A0A1W2PQJ5 194 aa8.65□□□□□ -1.02
CPNE3-209ENST00000620393 ARL5CA6NH57 179 aa8.65□□□□□ -1.02
CPNE3-209ENST00000620393 PTGESO14684 152 aa8.65□□□□□ -1.02
CPNE3-209ENST00000620393 EVI5O60447 810 aa8.65□□□□□ -1.02
CPNE3-209ENST00000620393 EFCAB14O75071 495 aa8.65□□□□□ -1.02
CPNE3-209ENST00000620393 ZC3H11AO75152 810 aaKnown RBP eCLIP8.65□□□□□ -1.02
CPNE3-209ENST00000620393 LRRN2O75325 713 aa8.65□□□□□ -1.02
CPNE3-209ENST00000620393 THP07101 528 aa8.65□□□□□ -1.02
CPNE3-209ENST00000620393 ACTN1P12814 892 aa8.65□□□□□ -1.02
CPNE3-209ENST00000620393 RBP5P82980 135 aa8.65□□□□□ -1.02
CPNE3-209ENST00000620393 PPIGQ13427 754 aaKnown RBP eCLIP8.65□□□□□ -1.02
CPNE3-209ENST00000620393 TRPC3Q13507 836 aa8.65□□□□□ -1.02
CPNE3-209ENST00000620393 NCOA4Q13772 614 aa8.65□□□□□ -1.02
CPNE3-209ENST00000620393 TRIM14Q14142 442 aa8.65□□□□□ -1.02
CPNE3-209ENST00000620393 SGSM1Q2NKQ1 1148 aa8.65□□□□□ -1.02
CPNE3-209ENST00000620393 WDR44Q5JSH3 913 aa8.65□□□□□ -1.02
CPNE3-209ENST00000620393 SCARA3Q6AZY7 606 aa8.65□□□□□ -1.02
CPNE3-209ENST00000620393 PHLDB3Q6NSJ2 640 aa8.65□□□□□ -1.02
CPNE3-209ENST00000620393 TRIM65Q6PJ69 517 aa8.65□□□□□ -1.02
CPNE3-209ENST00000620393 GLB1LQ6UWU2 654 aa8.65□□□□□ -1.02
CPNE3-209ENST00000620393 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.65□□□□□ -1.02
CPNE3-209ENST00000620393 C16orf59Q7L2K0 433 aa8.65□□□□□ -1.02
CPNE3-209ENST00000620393 C7orf61Q8IZ16 206 aa8.65□□□□□ -1.02
CPNE3-209ENST00000620393 TNS4Q8IZW8 715 aa8.65□□□□□ -1.02
CPNE3-209ENST00000620393 C1orf127Q8N9H9 656 aa8.65□□□□□ -1.02
CPNE3-209ENST00000620393 BEST2Q8NFU1 509 aa8.65□□□□□ -1.02
CPNE3-209ENST00000620393 NEK11Q8NG66 645 aa8.65□□□□□ -1.02
CPNE3-209ENST00000620393 CXorf38Q8TB03 319 aa8.65□□□□□ -1.02
CPNE3-209ENST00000620393 CPLX3Q8WVH0 158 aa8.65□□□□□ -1.02
CPNE3-209ENST00000620393 DPF3Q92784 378 aa8.65□□□□□ -1.02
CPNE3-209ENST00000620393 BADQ92934 168 aa8.65□□□□□ -1.02
CPNE3-209ENST00000620393 ZFP42Q96MM3 310 aa8.65□□□□□ -1.02
CPNE3-209ENST00000620393 PPP1R10Q96QC0 940 aaKnown RBP8.65□□□□□ -1.02
CPNE3-209ENST00000620393 TTYH3Q9C0H2 523 aa8.65□□□□□ -1.02
CPNE3-209ENST00000620393 MTMR12Q9C0I1 747 aa8.65□□□□□ -1.02
CPNE3-209ENST00000620393 SIX2Q9NPC8 291 aa8.65□□□□□ -1.02
CPNE3-209ENST00000620393 FAM207AQ9NSI2 230 aaPredicted RBP8.65□□□□□ -1.02
CPNE3-209ENST00000620393 RNF19AQ9NV58 838 aa8.65□□□□□ -1.02
CPNE3-209ENST00000620393 SLC38A7Q9NVC3 462 aa8.65□□□□□ -1.02
CPNE3-209ENST00000620393 GCNT4Q9P109 453 aa8.65□□□□□ -1.02
CPNE3-209ENST00000620393 KANSL3Q9P2N6 904 aa8.65□□□□□ -1.02
CPNE3-209ENST00000620393 SIX4Q9UIU6 781 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms