RNA–Protein interactions for RNA: ENST00000619747.1

LAPTM4B-204, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 2,758 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-204ENST00000619747 ANKRD33BA6NCL7 494 aa20.72■□□□□ 0.91
LAPTM4B-204ENST00000619747 IGBP1P78318 339 aa20.72■□□□□ 0.91
LAPTM4B-204ENST00000619747 ADCY2Q08462 1091 aa20.72■□□□□ 0.91
LAPTM4B-204ENST00000619747 HLTFQ14527 1009 aaKnown RBP eCLIP20.72■□□□□ 0.91
LAPTM4B-204ENST00000619747 FAM160B1Q5W0V3 765 aa20.72■□□□□ 0.91
LAPTM4B-204ENST00000619747 IFT20Q8IY31 132 aa20.72■□□□□ 0.91
LAPTM4B-204ENST00000619747 SCLT1Q96NL6 688 aa20.72■□□□□ 0.91
LAPTM4B-204ENST00000619747 SLC40A1Q9NP59 571 aa20.72■□□□□ 0.91
LAPTM4B-204ENST00000619747 PAPPA2Q9BXP8 1791 aa20.71■□□□□ 0.91
LAPTM4B-204ENST00000619747 CDR1P51861 262 aa20.71■□□□□ 0.91
LAPTM4B-204ENST00000619747 MOGSQ13724 837 aa20.71■□□□□ 0.91
LAPTM4B-204ENST00000619747 TARBP2Q15633 366 aaKnown RBP20.71■□□□□ 0.91
LAPTM4B-204ENST00000619747 RHPN2Q8IUC4 686 aa20.71■□□□□ 0.91
LAPTM4B-204ENST00000619747 CCDC13Q8IYE1 715 aa20.71■□□□□ 0.91
LAPTM4B-204ENST00000619747 ACTRT1Q8TDG2 376 aa20.71■□□□□ 0.91
LAPTM4B-204ENST00000619747 CPA5Q8WXQ8 436 aa20.71■□□□□ 0.91
LAPTM4B-204ENST00000619747 ZNF653Q96CK0 615 aa20.71■□□□□ 0.91
LAPTM4B-204ENST00000619747 TRIM31Q9BZY9 425 aa20.71■□□□□ 0.91
LAPTM4B-204ENST00000619747 SPATS2LQ9NUQ6 558 aaKnown RBP20.71■□□□□ 0.91
LAPTM4B-204ENST00000619747 TXNP10599 105 aaKnown RBP20.71■□□□□ 0.91
LAPTM4B-204ENST00000619747 SCFD2Q8WU76 684 aa20.71■□□□□ 0.91
LAPTM4B-204ENST00000619747 GPR20Q99678 358 aa20.71■□□□□ 0.91
LAPTM4B-204ENST00000619747 TMEM59LQ9UK28 342 aa20.71■□□□□ 0.91
LAPTM4B-204ENST00000619747 TRPC6Q9Y210 931 aa20.71■□□□□ 0.91
LAPTM4B-204ENST00000619747 DDX3YO15523 660 aaKnown RBP20.7■□□□□ 0.9
LAPTM4B-204ENST00000619747 CLDN3O15551 220 aa20.7■□□□□ 0.9
LAPTM4B-204ENST00000619747 ZEB2O60315 1214 aa20.7■□□□□ 0.9
LAPTM4B-204ENST00000619747 TGFB3P10600 412 aa20.7■□□□□ 0.9
LAPTM4B-204ENST00000619747 MKRN4PQ13434 485 aaPredicted RBP20.7■□□□□ 0.9
LAPTM4B-204ENST00000619747 WDR44Q5JSH3 913 aa20.7■□□□□ 0.9
LAPTM4B-204ENST00000619747 FAM228AQ86W67 206 aa20.7■□□□□ 0.9
LAPTM4B-204ENST00000619747 PASD1Q8IV76 773 aa20.7■□□□□ 0.9
LAPTM4B-204ENST00000619747 NLRP4Q96MN2 994 aa20.7■□□□□ 0.9
LAPTM4B-204ENST00000619747 UMODL1Q5DID0 1318 aa20.7■□□□□ 0.9
LAPTM4B-204ENST00000619747 H0YCG3 227 aa20.7■□□□□ 0.9
LAPTM4B-204ENST00000619747 CFHP08603 1231 aa20.7■□□□□ 0.9
LAPTM4B-204ENST00000619747 RNPC3Q96LT9 517 aaKnown RBP20.7■□□□□ 0.9
LAPTM4B-204ENST00000619747 SH3GL2Q99962 352 aa20.7■□□□□ 0.9
LAPTM4B-204ENST00000619747 NUP85Q9BW27 656 aa20.7■□□□□ 0.9
LAPTM4B-204ENST00000619747 PMM2O15305 246 aa20.69■□□□□ 0.9
LAPTM4B-204ENST00000619747 VNN1O95497 513 aa20.69■□□□□ 0.9
LAPTM4B-204ENST00000619747 C4BPAP04003 597 aaKnown RBP20.69■□□□□ 0.9
LAPTM4B-204ENST00000619747 COMTP21964 271 aa20.69■□□□□ 0.9
LAPTM4B-204ENST00000619747 EPHB4P54760 987 aa20.69■□□□□ 0.9
LAPTM4B-204ENST00000619747 CDR2Q01850 454 aa20.69■□□□□ 0.9
LAPTM4B-204ENST00000619747 PPIL2Q13356 520 aa20.69■□□□□ 0.9
LAPTM4B-204ENST00000619747 ZACNQ401N2 412 aa20.69■□□□□ 0.9
LAPTM4B-204ENST00000619747 GLE1Q53GS7 698 aaKnown RBP20.69■□□□□ 0.9
LAPTM4B-204ENST00000619747 MAP1SQ66K74 1059 aaPredicted RBP20.69■□□□□ 0.9
LAPTM4B-204ENST00000619747 GPAT2Q6NUI2 795 aa20.69■□□□□ 0.9
LAPTM4B-204ENST00000619747 THOC1Q96FV9 657 aaKnown RBP20.69■□□□□ 0.9
LAPTM4B-204ENST00000619747 TRIM7Q9C029 511 aa20.69■□□□□ 0.9
LAPTM4B-204ENST00000619747 IRAK4Q9NWZ3 460 aa20.69■□□□□ 0.9
LAPTM4B-204ENST00000619747 ADCY3O60266 1144 aa20.69■□□□□ 0.9
LAPTM4B-204ENST00000619747 MAFO75444 373 aaPredicted RBP20.69■□□□□ 0.9
LAPTM4B-204ENST00000619747 EZRP15311 586 aaKnown RBP20.69■□□□□ 0.9
LAPTM4B-204ENST00000619747 ERVK-9P63128 1117 aa20.69■□□□□ 0.9
LAPTM4B-204ENST00000619747 PSMD6Q15008 389 aa20.69■□□□□ 0.9
LAPTM4B-204ENST00000619747 SNCBQ16143 134 aa20.69■□□□□ 0.9
LAPTM4B-204ENST00000619747 RHOT2Q8IXI1 618 aa20.69■□□□□ 0.9
LAPTM4B-204ENST00000619747 SLC10A4Q96EP9 437 aa20.69■□□□□ 0.9
LAPTM4B-204ENST00000619747 SH3GL3Q99963 347 aa20.69■□□□□ 0.9
LAPTM4B-204ENST00000619747 KCNH4Q9UQ05 1017 aa20.69■□□□□ 0.9
LAPTM4B-204ENST00000619747 A0A0B4J269 797 aa20.68■□□□□ 0.9
LAPTM4B-204ENST00000619747 TTI1O43156 1089 aa20.68■□□□□ 0.9
LAPTM4B-204ENST00000619747 CAND2O75155 1236 aa20.68■□□□□ 0.9
LAPTM4B-204ENST00000619747 SLC25A27O95847 323 aa20.68■□□□□ 0.9
LAPTM4B-204ENST00000619747 GBP2P32456 591 aaPredicted RBP20.68■□□□□ 0.9
LAPTM4B-204ENST00000619747 ATP1A2P50993 1020 aa20.68■□□□□ 0.9
LAPTM4B-204ENST00000619747 LAMTOR4Q0VGL1 99 aa20.68■□□□□ 0.9
LAPTM4B-204ENST00000619747 CELF3Q5SZQ8 465 aaKnown RBP20.68■□□□□ 0.9
LAPTM4B-204ENST00000619747 TMEM130Q8N3G9 435 aa20.68■□□□□ 0.9
LAPTM4B-204ENST00000619747 DDX1Q92499 740 aaKnown RBP20.68■□□□□ 0.9
LAPTM4B-204ENST00000619747 APOBEC3GQ9HC16 384 aaKnown RBP20.68■□□□□ 0.9
LAPTM4B-204ENST00000619747 GDF3Q9NR23 364 aa20.68■□□□□ 0.9
LAPTM4B-204ENST00000619747 OSBPP22059 807 aa20.68■□□□□ 0.9
LAPTM4B-204ENST00000619747 CLCN3P51790 818 aa20.68■□□□□ 0.9
LAPTM4B-204ENST00000619747 TMEM132AQ24JP5 1023 aa20.68■□□□□ 0.9
LAPTM4B-204ENST00000619747 DAB2IPQ5VWQ8 1189 aa20.68■□□□□ 0.9
LAPTM4B-204ENST00000619747 TMEM270Q6UE05 265 aa20.68■□□□□ 0.9
LAPTM4B-204ENST00000619747 ZNF564Q8TBZ8 553 aaPredicted RBP20.68■□□□□ 0.9
LAPTM4B-204ENST00000619747 ERVK-5Q9HDB9 667 aa20.68■□□□□ 0.9
LAPTM4B-204ENST00000619747 ATXN2Q99700 1313 aaKnown RBP20.68■□□□□ 0.9
LAPTM4B-204ENST00000619747 GRIN3BO60391 1043 aa20.68■□□□□ 0.9
LAPTM4B-204ENST00000619747 CST3P01034 146 aaPredicted RBP20.68■□□□□ 0.9
LAPTM4B-204ENST00000619747 GTF2H1P32780 548 aa20.68■□□□□ 0.9
LAPTM4B-204ENST00000619747 TLDC1Q6P9B6 456 aa20.68■□□□□ 0.9
LAPTM4B-204ENST00000619747 C15orf39Q6ZRI6 1047 aa20.68■□□□□ 0.9
LAPTM4B-204ENST00000619747 THNSL1Q8IYQ7 743 aa20.68■□□□□ 0.9
LAPTM4B-204ENST00000619747 CCDC26Q8TAB7 109 aa20.68■□□□□ 0.9
LAPTM4B-204ENST00000619747 SPDL1Q96EA4 605 aa20.68■□□□□ 0.9
LAPTM4B-204ENST00000619747 DPH5Q9H2P9 285 aa20.68■□□□□ 0.9
LAPTM4B-204ENST00000619747 ZBTB42B2RXF5 422 aa20.67■□□□□ 0.9
LAPTM4B-204ENST00000619747 INO80B-WBP1J3KQ70 363 aa20.67■□□□□ 0.9
LAPTM4B-204ENST00000619747 RFC5P40937 340 aa20.67■□□□□ 0.9
LAPTM4B-204ENST00000619747 SNX1Q13596 522 aa20.67■□□□□ 0.9
LAPTM4B-204ENST00000619747 ZNF394Q53GI3 561 aa20.67■□□□□ 0.9
LAPTM4B-204ENST00000619747 ARMC9Q7Z3E5 817 aa20.67■□□□□ 0.9
LAPTM4B-204ENST00000619747 INO80BQ9C086 356 aaPredicted RBP20.67■□□□□ 0.9
LAPTM4B-204ENST00000619747 RNPEPQ9H4A4 650 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms