RNA–Protein interactions for RNA: ENST00000618771.1

TRAF4-217, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-217ENST00000618771 I3L4J1 428 aa23.85■■□□□ 1.41
TRAF4-217ENST00000618771 RPL9P32969 192 aaKnown RBP23.85■■□□□ 1.41
TRAF4-217ENST00000618771 STAT6P42226 847 aa23.85■■□□□ 1.41
TRAF4-217ENST00000618771 BRCC3P46736 316 aa23.85■■□□□ 1.41
TRAF4-217ENST00000618771 GTF2BQ00403 316 aa23.85■■□□□ 1.41
TRAF4-217ENST00000618771 SV2BQ7L1I2 683 aa23.85■■□□□ 1.41
TRAF4-217ENST00000618771 ZDHHC14Q8IZN3 488 aa23.85■■□□□ 1.41
TRAF4-217ENST00000618771 PLCD3Q8N3E9 789 aa23.85■■□□□ 1.41
TRAF4-217ENST00000618771 LINC00301Q8NCQ3 95 aa23.85■■□□□ 1.41
TRAF4-217ENST00000618771 SMG7Q92540 1137 aaKnown RBP23.85■■□□□ 1.41
TRAF4-217ENST00000618771 DDX12PQ92771 950 aa23.85■■□□□ 1.41
TRAF4-217ENST00000618771 PLEKHA5Q9HAU0 1116 aa23.85■■□□□ 1.41
TRAF4-217ENST00000618771 ZDHHC7Q9NXF8 308 aa23.85■■□□□ 1.41
TRAF4-217ENST00000618771 FBXW11Q9UKB1 542 aa23.85■■□□□ 1.41
TRAF4-217ENST00000618771 CFAP54Q96N23 3096 aa23.85■■□□□ 1.41
TRAF4-217ENST00000618771 PDIA4P13667 645 aaKnown RBP23.84■■□□□ 1.41
TRAF4-217ENST00000618771 TKTP29401 623 aaKnown RBP23.84■■□□□ 1.41
TRAF4-217ENST00000618771 TNFSF9P41273 254 aa23.84■■□□□ 1.41
TRAF4-217ENST00000618771 KYAT1Q16773 422 aa23.84■■□□□ 1.41
TRAF4-217ENST00000618771 FOXD4L5Q5VV16 416 aaPredicted RBP23.84■■□□□ 1.41
TRAF4-217ENST00000618771 OTOP3Q7RTS5 596 aa23.84■■□□□ 1.41
TRAF4-217ENST00000618771 SFR1Q86XK3 245 aa23.84■■□□□ 1.41
TRAF4-217ENST00000618771 MAP4K3Q8IVH8 894 aa23.84■■□□□ 1.41
TRAF4-217ENST00000618771 FOXD4L4Q8WXT5 416 aaPredicted RBP23.84■■□□□ 1.41
TRAF4-217ENST00000618771 ATOH1Q92858 354 aaPredicted RBP23.84■■□□□ 1.41
TRAF4-217ENST00000618771 ZNF707Q96C28 371 aaPredicted RBP23.84■■□□□ 1.41
TRAF4-217ENST00000618771 MTRRQ9UBK8 725 aa23.84■■□□□ 1.41
TRAF4-217ENST00000618771 TTC26A0AVF1 554 aa23.83■■□□□ 1.41
TRAF4-217ENST00000618771 MYMKA6NI61 221 aa23.83■■□□□ 1.41
TRAF4-217ENST00000618771 SPTLC2O15270 562 aa23.83■■□□□ 1.41
TRAF4-217ENST00000618771 ADAM12O43184 909 aa23.83■■□□□ 1.41
TRAF4-217ENST00000618771 PAPLNO95428 1278 aa23.83■■□□□ 1.41
TRAF4-217ENST00000618771 PPP2R3AQ06190 1150 aa23.83■■□□□ 1.41
TRAF4-217ENST00000618771 ZC2HC1CQ53FD0 456 aaPredicted RBP23.83■■□□□ 1.41
TRAF4-217ENST00000618771 ACSF2Q96CM8 615 aaPredicted RBP23.83■■□□□ 1.41
TRAF4-217ENST00000618771 MSTO1Q9BUK6 570 aa23.83■■□□□ 1.41
TRAF4-217ENST00000618771 PANK2Q9BZ23 570 aa23.83■■□□□ 1.41
TRAF4-217ENST00000618771 IRF2BPLQ9H1B7 796 aa23.83■■□□□ 1.41
TRAF4-217ENST00000618771 ST6GALNAC4Q9H4F1 302 aa23.83■■□□□ 1.41
TRAF4-217ENST00000618771 PIDD1Q9HB75 910 aa23.83■■□□□ 1.41
TRAF4-217ENST00000618771 WDR6Q9NNW5 1121 aaKnown RBP23.83■■□□□ 1.41
TRAF4-217ENST00000618771 TFIP11Q9UBB9 837 aaKnown RBP23.83■■□□□ 1.41
TRAF4-217ENST00000618771 NUB1Q9Y5A7 615 aa23.83■■□□□ 1.41
TRAF4-217ENST00000618771 A0A087X0B3 334 aa23.82■■□□□ 1.4
TRAF4-217ENST00000618771 A0A0B4J269 797 aa23.82■■□□□ 1.4
TRAF4-217ENST00000618771 OGTO15294 1046 aa23.82■■□□□ 1.4
TRAF4-217ENST00000618771 FAM189A1O60320 539 aa23.82■■□□□ 1.4
TRAF4-217ENST00000618771 GFRA3O60609 400 aa23.82■■□□□ 1.4
TRAF4-217ENST00000618771 ZMYND10O75800 440 aa23.82■■□□□ 1.4
TRAF4-217ENST00000618771 OR1D2P34982 312 aa23.82■■□□□ 1.4
TRAF4-217ENST00000618771 ZBTB41Q5SVQ8 909 aa23.82■■□□□ 1.4
TRAF4-217ENST00000618771 LIN9Q5TKA1 542 aa23.82■■□□□ 1.4
TRAF4-217ENST00000618771 SLC39A4Q6P5W5 647 aa23.82■■□□□ 1.4
TRAF4-217ENST00000618771 ANKS3Q6ZW76 656 aa23.82■■□□□ 1.4
TRAF4-217ENST00000618771 KIF12Q96FN5 646 aa23.82■■□□□ 1.4
TRAF4-217ENST00000618771 PRKD2Q9BZL6 878 aa23.82■■□□□ 1.4
TRAF4-217ENST00000618771 TUBGCP4Q9UGJ1 667 aa23.82■■□□□ 1.4
TRAF4-217ENST00000618771 LIMD1Q9UGP4 676 aa23.82■■□□□ 1.4
TRAF4-217ENST00000618771 SORCS3Q9UPU3 1222 aa23.82■■□□□ 1.4
TRAF4-217ENST00000618771 CLUHO75153 1309 aa23.82■■□□□ 1.4
TRAF4-217ENST00000618771 H0Y858 1186 aa23.81■■□□□ 1.4
TRAF4-217ENST00000618771 PPP6R2O75170 966 aa23.81■■□□□ 1.4
TRAF4-217ENST00000618771 YEATS4O95619 227 aa23.81■■□□□ 1.4
TRAF4-217ENST00000618771 ASGR2P07307 311 aa23.81■■□□□ 1.4
TRAF4-217ENST00000618771 GAP43P17677 238 aa23.81■■□□□ 1.4
TRAF4-217ENST00000618771 SPAG1Q07617 926 aa23.81■■□□□ 1.4
TRAF4-217ENST00000618771 MTMR3Q13615 1198 aa23.81■■□□□ 1.4
TRAF4-217ENST00000618771 RAB33AQ14088 237 aa23.81■■□□□ 1.4
TRAF4-217ENST00000618771 ZNF720Q7Z2F6 126 aa23.81■■□□□ 1.4
TRAF4-217ENST00000618771 UBALD2Q8IYN6 164 aa23.81■■□□□ 1.4
TRAF4-217ENST00000618771 PDILTQ8N807 584 aa23.81■■□□□ 1.4
TRAF4-217ENST00000618771 STAMQ92783 540 aa23.81■■□□□ 1.4
TRAF4-217ENST00000618771 HVCN1Q96D96 273 aa23.81■■□□□ 1.4
TRAF4-217ENST00000618771 DNAJC19Q96DA6 116 aa23.81■■□□□ 1.4
TRAF4-217ENST00000618771 RPF1Q9H9Y2 349 aaKnown RBP23.81■■□□□ 1.4
TRAF4-217ENST00000618771 SEL1LQ9UBV2 794 aa23.81■■□□□ 1.4
TRAF4-217ENST00000618771 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.81■■□□□ 1.4
TRAF4-217ENST00000618771 BACE2Q9Y5Z0 518 aa23.81■■□□□ 1.4
TRAF4-217ENST00000618771 CDY1Q9Y6F8 540 aa23.81■■□□□ 1.4
TRAF4-217ENST00000618771 SYN3O14994 580 aa23.8■■□□□ 1.4
TRAF4-217ENST00000618771 F13A1P00488 732 aa23.8■■□□□ 1.4
TRAF4-217ENST00000618771 ZSCAN22P10073 491 aaPredicted RBP23.8■■□□□ 1.4
TRAF4-217ENST00000618771 MCM4P33991 863 aa23.8■■□□□ 1.4
TRAF4-217ENST00000618771 ENOX2Q16206 610 aaKnown RBP23.8■■□□□ 1.4
TRAF4-217ENST00000618771 RSPO2Q6UXX9 243 aaPredicted RBP23.8■■□□□ 1.4
TRAF4-217ENST00000618771 SMOC2Q9H3U7 446 aa23.8■■□□□ 1.4
TRAF4-217ENST00000618771 MRPL44Q9H9J2 332 aaKnown RBP23.8■■□□□ 1.4
TRAF4-217ENST00000618771 UBQLN1Q9UMX0 589 aaKnown RBP23.8■■□□□ 1.4
TRAF4-217ENST00000618771 PTPRZ1P23471 2315 aaPredicted RBP23.79■■□□□ 1.4
TRAF4-217ENST00000618771 LACTBL1A8MY62 500 aa23.79■■□□□ 1.4
TRAF4-217ENST00000618771 ANKRD63C9JTQ0 380 aa23.79■■□□□ 1.4
TRAF4-217ENST00000618771 PPP1R37O75864 691 aa23.79■■□□□ 1.4
TRAF4-217ENST00000618771 C8AP07357 584 aa23.79■■□□□ 1.4
TRAF4-217ENST00000618771 IDEP14735 1019 aa23.79■■□□□ 1.4
TRAF4-217ENST00000618771 ZBTB6Q15916 424 aa23.79■■□□□ 1.4
TRAF4-217ENST00000618771 PPM1LQ5SGD2 360 aa23.79■■□□□ 1.4
TRAF4-217ENST00000618771 VARS2Q5ST30 1063 aaKnown RBP23.79■■□□□ 1.4
TRAF4-217ENST00000618771 SLFN12LQ6IEE8 588 aa23.79■■□□□ 1.4
TRAF4-217ENST00000618771 SUSD3Q96L08 255 aa23.79■■□□□ 1.4
TRAF4-217ENST00000618771 TBC1D7Q9P0N9 293 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms