RNA–Protein interactions for RNA: ENST00000617757.1

TARDBP-219, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 434 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-219ENST00000617757 MIOSQ9NXC5 875 aa8.71□□□□□ -1.02
TARDBP-219ENST00000617757 PCDH10Q9P2E7 1040 aa8.71□□□□□ -1.02
TARDBP-219ENST00000617757 IMPACTQ9P2X3 320 aa8.71□□□□□ -1.02
TARDBP-219ENST00000617757 PRKAG2Q9UGJ0 569 aa8.71□□□□□ -1.02
TARDBP-219ENST00000617757 UBQLN1Q9UMX0 589 aaKnown RBP8.71□□□□□ -1.02
TARDBP-219ENST00000617757 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.71□□□□□ -1.02
TARDBP-219ENST00000617757 ARL5CA6NH57 179 aa8.7□□□□□ -1.02
TARDBP-219ENST00000617757 RNF225M0QZC1 329 aaPredicted RBP8.7□□□□□ -1.02
TARDBP-219ENST00000617757 EPHB6O15197 1021 aa8.7□□□□□ -1.02
TARDBP-219ENST00000617757 INPPL1O15357 1258 aa8.7□□□□□ -1.02
TARDBP-219ENST00000617757 XPOTO43592 962 aaKnown RBP8.7□□□□□ -1.02
TARDBP-219ENST00000617757 PHACTR2O75167 634 aa8.7□□□□□ -1.02
TARDBP-219ENST00000617757 OFD1O75665 1012 aa8.7□□□□□ -1.02
TARDBP-219ENST00000617757 GYPCP04921 128 aa8.7□□□□□ -1.02
TARDBP-219ENST00000617757 ITGB3P05106 788 aa8.7□□□□□ -1.02
TARDBP-219ENST00000617757 CYP3A5P20815 502 aa8.7□□□□□ -1.02
TARDBP-219ENST00000617757 CASP14P31944 242 aa8.7□□□□□ -1.02
TARDBP-219ENST00000617757 MLH1P40692 756 aa8.7□□□□□ -1.02
TARDBP-219ENST00000617757 SCNN1GP51170 649 aa8.7□□□□□ -1.02
TARDBP-219ENST00000617757 AFF1P51825 1210 aaKnown RBP8.7□□□□□ -1.02
TARDBP-219ENST00000617757 TRIM14Q14142 442 aa8.7□□□□□ -1.02
TARDBP-219ENST00000617757 IKBKEQ14164 716 aa8.7□□□□□ -1.02
TARDBP-219ENST00000617757 NAB2Q15742 525 aa8.7□□□□□ -1.02
TARDBP-219ENST00000617757 GLRA4Q5JXX5 417 aa8.7□□□□□ -1.02
TARDBP-219ENST00000617757 KLHDC7AQ5VTJ3 777 aa8.7□□□□□ -1.02
TARDBP-219ENST00000617757 PHLDB3Q6NSJ2 640 aa8.7□□□□□ -1.02
TARDBP-219ENST00000617757 CCDC186Q7Z3E2 898 aa8.7□□□□□ -1.02
TARDBP-219ENST00000617757 PPFIBP1Q86W92 1011 aa8.7□□□□□ -1.02
TARDBP-219ENST00000617757 CRIPAKQ8N1N5 446 aa8.7□□□□□ -1.02
TARDBP-219ENST00000617757 C1orf127Q8N9H9 656 aa8.7□□□□□ -1.02
TARDBP-219ENST00000617757 CPLX3Q8WVH0 158 aa8.7□□□□□ -1.02
TARDBP-219ENST00000617757 BADQ92934 168 aa8.7□□□□□ -1.02
TARDBP-219ENST00000617757 C18orf25Q96B23 403 aaPredicted RBP8.7□□□□□ -1.02
TARDBP-219ENST00000617757 IQCDQ96DY2 449 aa8.7□□□□□ -1.02
TARDBP-219ENST00000617757 PPP1R10Q96QC0 940 aaKnown RBP8.7□□□□□ -1.02
TARDBP-219ENST00000617757 RPS6KC1Q96S38 1066 aa8.7□□□□□ -1.02
TARDBP-219ENST00000617757 EDEM3Q9BZQ6 932 aa8.7□□□□□ -1.02
TARDBP-219ENST00000617757 GANQ9H2C0 597 aa8.7□□□□□ -1.02
TARDBP-219ENST00000617757 IL23AQ9NPF7 189 aa8.7□□□□□ -1.02
TARDBP-219ENST00000617757 FAM207AQ9NSI2 230 aaPredicted RBP8.7□□□□□ -1.02
TARDBP-219ENST00000617757 TMEM161AQ9NX61 479 aa8.7□□□□□ -1.02
TARDBP-219ENST00000617757 DPP3Q9NY33 737 aa8.7□□□□□ -1.02
TARDBP-219ENST00000617757 SIX4Q9UIU6 781 aa8.7□□□□□ -1.02
TARDBP-219ENST00000617757 FBXL5Q9UKA1 691 aa8.7□□□□□ -1.02
TARDBP-219ENST00000617757 CAPN11Q9UMQ6 739 aa8.7□□□□□ -1.02
TARDBP-219ENST00000617757 PCDHB7Q9Y5E2 793 aa8.7□□□□□ -1.02
TARDBP-219ENST00000617757 TSC2P49815 1807 aa8.7□□□□□ -1.02
TARDBP-219ENST00000617757 GBF1Q92538 1859 aa8.7□□□□□ -1.02
TARDBP-219ENST00000617757 COL4A6Q14031 1691 aa8.69□□□□□ -1.02
TARDBP-219ENST00000617757 NLRC5Q86WI3 1866 aa8.69□□□□□ -1.02
TARDBP-219ENST00000617757 ABHD14A-ACY1A0A1B0GW23 586 aa8.69□□□□□ -1.02
TARDBP-219ENST00000617757 A0A1W2PQJ5 194 aa8.69□□□□□ -1.02
TARDBP-219ENST00000617757 GOLGA6L6A8MZA4 724 aa8.69□□□□□ -1.02
TARDBP-219ENST00000617757 PIRO00625 290 aa8.69□□□□□ -1.02
TARDBP-219ENST00000617757 EVI5O60447 810 aa8.69□□□□□ -1.02
TARDBP-219ENST00000617757 ZC3H11AO75152 810 aaKnown RBP eCLIP8.69□□□□□ -1.021e-7■■□□□ 12
TARDBP-219ENST00000617757 ASS1P00966 412 aaKnown RBP8.69□□□□□ -1.02
TARDBP-219ENST00000617757 POMCP01189 267 aa8.69□□□□□ -1.02
TARDBP-219ENST00000617757 THP07101 528 aa8.69□□□□□ -1.02
TARDBP-219ENST00000617757 PFKMP08237 780 aa8.69□□□□□ -1.02
TARDBP-219ENST00000617757 KRT19P08727 400 aa8.69□□□□□ -1.02
TARDBP-219ENST00000617757 ACRP10323 421 aa8.69□□□□□ -1.02
TARDBP-219ENST00000617757 SYN1P17600 705 aa8.69□□□□□ -1.02
TARDBP-219ENST00000617757 TRIM21P19474 475 aaKnown RBP8.69□□□□□ -1.02
TARDBP-219ENST00000617757 DEKP35659 375 aaKnown RBP8.69□□□□□ -1.02
TARDBP-219ENST00000617757 PIK3CAP42336 1068 aa8.69□□□□□ -1.02
TARDBP-219ENST00000617757 FXR1P51114 621 aaKnown RBP eCLIP8.69□□□□□ -1.02
TARDBP-219ENST00000617757 GUCY2FP51841 1108 aa8.69□□□□□ -1.02
TARDBP-219ENST00000617757 MYL6P60660 151 aa8.69□□□□□ -1.02
TARDBP-219ENST00000617757 RBP5P82980 135 aa8.69□□□□□ -1.02
TARDBP-219ENST00000617757 SOX4Q06945 474 aaPredicted RBP8.69□□□□□ -1.02
TARDBP-219ENST00000617757 LRMPQ12912 555 aa8.69□□□□□ -1.02
TARDBP-219ENST00000617757 PPIGQ13427 754 aaKnown RBP eCLIP8.69□□□□□ -1.02
TARDBP-219ENST00000617757 TRPC3Q13507 836 aa8.69□□□□□ -1.02
TARDBP-219ENST00000617757 NCOA4Q13772 614 aa8.69□□□□□ -1.02
TARDBP-219ENST00000617757 SGSM1Q2NKQ1 1148 aa8.69□□□□□ -1.02
TARDBP-219ENST00000617757 CLLU1OSQ5K130 101 aa8.69□□□□□ -1.02
TARDBP-219ENST00000617757 IQCEQ6IPM2 695 aa8.69□□□□□ -1.02
TARDBP-219ENST00000617757 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.69□□□□□ -1.021e-13■■■■■ 35.6
TARDBP-219ENST00000617757 C16orf59Q7L2K0 433 aa8.69□□□□□ -1.02
TARDBP-219ENST00000617757 ARHGEF19Q8IW93 802 aa8.69□□□□□ -1.02
TARDBP-219ENST00000617757 TC2NQ8N9U0 490 aa8.69□□□□□ -1.02
TARDBP-219ENST00000617757 BEST2Q8NFU1 509 aa8.69□□□□□ -1.02
TARDBP-219ENST00000617757 HELQQ8TDG4 1101 aa8.69□□□□□ -1.02
TARDBP-219ENST00000617757 TATDN2Q93075 761 aa8.69□□□□□ -1.02
TARDBP-219ENST00000617757 ELMO3Q96BJ8 720 aa8.69□□□□□ -1.02
TARDBP-219ENST00000617757 PI4K2AQ9BTU6 479 aa8.69□□□□□ -1.02
TARDBP-219ENST00000617757 NAA15Q9BXJ9 866 aaKnown RBP8.69□□□□□ -1.02
TARDBP-219ENST00000617757 NLRC4Q9NPP4 1024 aa8.69□□□□□ -1.02
TARDBP-219ENST00000617757 CEP72Q9P209 647 aa8.69□□□□□ -1.02
TARDBP-219ENST00000617757 APEX2Q9UBZ4 518 aa8.69□□□□□ -1.02
TARDBP-219ENST00000617757 TUBGCP4Q9UGJ1 667 aa8.69□□□□□ -1.02
TARDBP-219ENST00000617757 AJAP1Q9UKB5 411 aaPredicted RBP8.69□□□□□ -1.02
TARDBP-219ENST00000617757 ITGA11Q9UKX5 1188 aa8.69□□□□□ -1.02
TARDBP-219ENST00000617757 LRFN2Q9ULH4 789 aa8.69□□□□□ -1.02
TARDBP-219ENST00000617757 PLAGL2Q9UPG8 496 aa8.69□□□□□ -1.02
TARDBP-219ENST00000617757 AGAP1Q9UPQ3 857 aa8.69□□□□□ -1.02
TARDBP-219ENST00000617757 FHOD1Q9Y613 1164 aa8.69□□□□□ -1.02
TARDBP-219ENST00000617757 MKI67P46013 3256 aaKnown RBP8.69□□□□□ -1.02
TARDBP-219ENST00000617757 ANO9A1A5B4 782 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms