RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 CLSTN3Q9BQT9 956 aa9.41□□□□□ -0.9
GPC6-202ENST00000617456 TTPALQ9BTX7 342 aa9.41□□□□□ -0.9
GPC6-202ENST00000617456 POLR3CQ9BUI4 534 aaPredicted RBP9.41□□□□□ -0.9
GPC6-202ENST00000617456 OSBPL6Q9BZF3 934 aa9.41□□□□□ -0.9
GPC6-202ENST00000617456 EPC1Q9H2F5 836 aa9.41□□□□□ -0.9
GPC6-202ENST00000617456 TUFT1Q9NNX1 390 aa9.41□□□□□ -0.9
GPC6-202ENST00000617456 PARD6AQ9NPB6 346 aa9.41□□□□□ -0.9
GPC6-202ENST00000617456 GJB4Q9NTQ9 266 aa9.41□□□□□ -0.9
GPC6-202ENST00000617456 HCFC1R1Q9NWW0 138 aa9.41□□□□□ -0.9
GPC6-202ENST00000617456 GMEB2Q9UKD1 530 aa9.41□□□□□ -0.9
GPC6-202ENST00000617456 CNOT1A5YKK6 2376 aaKnown RBP9.41□□□□□ -0.9
GPC6-202ENST00000617456 LAD1O00515 517 aa9.4□□□□□ -0.9
GPC6-202ENST00000617456 COQ9O75208 318 aa9.4□□□□□ -0.9
GPC6-202ENST00000617456 KIF4AO95239 1232 aa9.4□□□□□ -0.9
GPC6-202ENST00000617456 RPA1P27694 616 aa9.4□□□□□ -0.9
GPC6-202ENST00000617456 ARL2P36404 184 aa9.4□□□□□ -0.9
GPC6-202ENST00000617456 MAGEA9P43362 315 aa9.4□□□□□ -0.9
GPC6-202ENST00000617456 RARRES1P49788 294 aa9.4□□□□□ -0.9
GPC6-202ENST00000617456 GABPB1Q06547 395 aaPredicted RBP9.4□□□□□ -0.9
GPC6-202ENST00000617456 GRIK3Q13003 919 aa9.4□□□□□ -0.9
GPC6-202ENST00000617456 CAPSQ13938 189 aa9.4□□□□□ -0.9
GPC6-202ENST00000617456 AMHR2Q16671 573 aa9.4□□□□□ -0.9
GPC6-202ENST00000617456 ST3GAL2Q16842 350 aa9.4□□□□□ -0.9
GPC6-202ENST00000617456 C11orf91Q3C1V1 193 aa9.4□□□□□ -0.9
GPC6-202ENST00000617456 PABPC1LQ4VXU2 614 aaKnown RBP9.4□□□□□ -0.9
GPC6-202ENST00000617456 CT47A1Q5JQC4 288 aaPredicted RBP9.4□□□□□ -0.9
GPC6-202ENST00000617456 RSPO2Q6UXX9 243 aaPredicted RBP9.4□□□□□ -0.9
GPC6-202ENST00000617456 ZNF852Q6ZMS4 543 aa9.4□□□□□ -0.9
GPC6-202ENST00000617456 TPH2Q8IWU9 490 aa9.4□□□□□ -0.9
GPC6-202ENST00000617456 ZBTB44Q8NCP5 570 aa9.4□□□□□ -0.9
GPC6-202ENST00000617456 GSTCDQ8NEC7 633 aa9.4□□□□□ -0.9
GPC6-202ENST00000617456 MCPH1Q8NEM0 835 aa9.4□□□□□ -0.9
GPC6-202ENST00000617456 ERMNQ8TAM6 284 aa9.4□□□□□ -0.9
GPC6-202ENST00000617456 LNX1Q8TBB1 728 aaPredicted RBP9.4□□□□□ -0.9
GPC6-202ENST00000617456 MCRS1Q96EZ8 462 aa9.4□□□□□ -0.9
GPC6-202ENST00000617456 CHAMP1Q96JM3 812 aa9.4□□□□□ -0.9
GPC6-202ENST00000617456 C8orf76Q96K31 380 aa9.4□□□□□ -0.9
GPC6-202ENST00000617456 NACC1Q96RE7 527 aa9.4□□□□□ -0.9
GPC6-202ENST00000617456 PAIP2Q9BPZ3 127 aaKnown RBP9.4□□□□□ -0.9
GPC6-202ENST00000617456 RTKNQ9BST9 563 aa9.4□□□□□ -0.9
GPC6-202ENST00000617456 PLA2G2FQ9BZM2 168 aa9.4□□□□□ -0.9
GPC6-202ENST00000617456 XPNPEP1Q9NQW7 623 aa9.4□□□□□ -0.9
GPC6-202ENST00000617456 HEBP1Q9NRV9 189 aa9.4□□□□□ -0.9
GPC6-202ENST00000617456 WDR70Q9NW82 654 aa9.4□□□□□ -0.9
GPC6-202ENST00000617456 DNMT3BQ9UBC3 853 aaKnown RBP9.4□□□□□ -0.9
GPC6-202ENST00000617456 RAB23Q9ULC3 237 aa9.4□□□□□ -0.9
GPC6-202ENST00000617456 NDRG2Q9UN36 371 aaKnown RBP9.4□□□□□ -0.9
GPC6-202ENST00000617456 TDRD15B5MCY1 1934 aaKnown RBP9.4□□□□□ -0.9
GPC6-202ENST00000617456 NCAM2O15394 837 aa9.39□□□□□ -0.91
GPC6-202ENST00000617456 TBC1D4O60343 1298 aa9.39□□□□□ -0.91
GPC6-202ENST00000617456 LILRB5O75023 590 aa9.39□□□□□ -0.91
GPC6-202ENST00000617456 LARGE1O95461 756 aa9.39□□□□□ -0.91
GPC6-202ENST00000617456 U2AF2P26368 475 aaKnown RBP eCLIP9.39□□□□□ -0.91
GPC6-202ENST00000617456 HOXA9P31269 272 aa9.39□□□□□ -0.91
GPC6-202ENST00000617456 TXKP42681 527 aa9.39□□□□□ -0.91
GPC6-202ENST00000617456 SPEM2Q0P670 501 aa9.39□□□□□ -0.91
GPC6-202ENST00000617456 MTAPQ13126 283 aa9.39□□□□□ -0.91
GPC6-202ENST00000617456 TUSC3Q13454 348 aa9.39□□□□□ -0.91
GPC6-202ENST00000617456 FAM187BQ17R55 369 aa9.39□□□□□ -0.91
GPC6-202ENST00000617456 SLC27A1Q6PCB7 646 aa9.39□□□□□ -0.91
GPC6-202ENST00000617456 NOSTRINQ8IVI9 506 aa9.39□□□□□ -0.91
GPC6-202ENST00000617456 NPAS3Q8IXF0 933 aa9.39□□□□□ -0.91
GPC6-202ENST00000617456 SPDYE1Q8NFV5 336 aaPredicted RBP9.39□□□□□ -0.91
GPC6-202ENST00000617456 PIK3R5Q8WYR1 880 aa9.39□□□□□ -0.91
GPC6-202ENST00000617456 CLDN23Q96B33 292 aa9.39□□□□□ -0.91
GPC6-202ENST00000617456 RAB34Q9BZG1 259 aa9.39□□□□□ -0.91
GPC6-202ENST00000617456 PRMT8Q9NR22 394 aaPredicted RBP9.39□□□□□ -0.91
GPC6-202ENST00000617456 MRPS17Q9Y2R5 130 aaKnown RBP9.39□□□□□ -0.91
GPC6-202ENST00000617456 MRPS23Q9Y3D9 190 aaKnown RBP9.39□□□□□ -0.91
GPC6-202ENST00000617456 PHLPP2Q6ZVD8 1323 aa9.38□□□□□ -0.91
GPC6-202ENST00000617456 SDK1Q7Z5N4 2213 aa9.38□□□□□ -0.91
GPC6-202ENST00000617456 A0A1B0GUA9 196 aa9.38□□□□□ -0.91
GPC6-202ENST00000617456 JAK2O60674 1132 aa9.38□□□□□ -0.91
GPC6-202ENST00000617456 SEC24BO95487 1268 aa9.38□□□□□ -0.91
GPC6-202ENST00000617456 SPATA31C1P0DKV0 1188 aa9.38□□□□□ -0.91
GPC6-202ENST00000617456 TGM1P22735 817 aa9.38□□□□□ -0.91
GPC6-202ENST00000617456 GLRA2P23416 452 aa9.38□□□□□ -0.91
GPC6-202ENST00000617456 OR1D2P34982 312 aa9.38□□□□□ -0.91
GPC6-202ENST00000617456 MCM2P49736 904 aa9.38□□□□□ -0.91
GPC6-202ENST00000617456 FXR2P51116 673 aaKnown RBP eCLIP9.38□□□□□ -0.91
GPC6-202ENST00000617456 GRM2Q14416 872 aa9.38□□□□□ -0.91
GPC6-202ENST00000617456 RABEP1Q15276 862 aa9.38□□□□□ -0.91
GPC6-202ENST00000617456 HS1BP3Q53T59 392 aa9.38□□□□□ -0.91
GPC6-202ENST00000617456 ZC3H12AQ5D1E8 599 aaKnown RBP9.38□□□□□ -0.91
GPC6-202ENST00000617456 PPM1JQ5JR12 505 aa9.38□□□□□ -0.91
GPC6-202ENST00000617456 HAUS3Q68CZ6 603 aa9.38□□□□□ -0.91
GPC6-202ENST00000617456 TANGO2Q6ICL3 276 aa9.38□□□□□ -0.91
GPC6-202ENST00000617456 PRR23BQ6ZRT6 265 aa9.38□□□□□ -0.91
GPC6-202ENST00000617456 MAEAQ7L5Y9 396 aa9.38□□□□□ -0.91
GPC6-202ENST00000617456 CATSPER3Q86XQ3 398 aa9.38□□□□□ -0.91
GPC6-202ENST00000617456 FAM184AQ8NB25 1140 aa9.38□□□□□ -0.91
GPC6-202ENST00000617456 NELL1Q92832 810 aa9.38□□□□□ -0.91
GPC6-202ENST00000617456 CCDC43Q96MW1 224 aaKnown RBP9.38□□□□□ -0.91
GPC6-202ENST00000617456 NELL2Q99435 816 aa9.38□□□□□ -0.91
GPC6-202ENST00000617456 KIF2CQ99661 725 aa9.38□□□□□ -0.91
GPC6-202ENST00000617456 POLR3FQ9H1D9 316 aaPredicted RBP9.38□□□□□ -0.91
GPC6-202ENST00000617456 C2orf40Q9H1Z8 148 aa9.38□□□□□ -0.91
GPC6-202ENST00000617456 CXCL16Q9H2A7 254 aa9.38□□□□□ -0.91
GPC6-202ENST00000617456 SNTG2Q9NY99 539 aa9.38□□□□□ -0.91
GPC6-202ENST00000617456 CALCOCO1Q9P1Z2 691 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms