RNA–Protein interactions for RNA: ENST00000616887.1

PCDHGA9-202, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA9, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-202ENST00000616887 EBF2Q9HAK2 575 aa12.22□□□□□ -0.45
PCDHGA9-202ENST00000616887 RBPJLQ9UBG7 517 aa12.22□□□□□ -0.45
PCDHGA9-202ENST00000616887 FAM153AQ9UHL3 310 aa12.22□□□□□ -0.45
PCDHGA9-202ENST00000616887 LOC285556D6RIA3 1793 aa12.21□□□□□ -0.45
PCDHGA9-202ENST00000616887 STAM2O75886 525 aa12.21□□□□□ -0.45
PCDHGA9-202ENST00000616887 ATG7O95352 703 aa12.21□□□□□ -0.45
PCDHGA9-202ENST00000616887 GJB1P08034 283 aa12.21□□□□□ -0.45
PCDHGA9-202ENST00000616887 CHRNB2P17787 502 aa12.21□□□□□ -0.45
PCDHGA9-202ENST00000616887 LIG4P49917 911 aa12.21□□□□□ -0.45
PCDHGA9-202ENST00000616887 CETN1Q12798 172 aa12.21□□□□□ -0.45
PCDHGA9-202ENST00000616887 GJC2Q5T442 439 aaPredicted RBP12.21□□□□□ -0.45
PCDHGA9-202ENST00000616887 NT5DC3Q86UY8 548 aa12.21□□□□□ -0.45
PCDHGA9-202ENST00000616887 GPD1LQ8N335 351 aa12.21□□□□□ -0.45
PCDHGA9-202ENST00000616887 HVCN1Q96D96 273 aa12.21□□□□□ -0.45
PCDHGA9-202ENST00000616887 SEC16BQ96JE7 1060 aa12.21□□□□□ -0.45
PCDHGA9-202ENST00000616887 ATP6V1G3Q96LB4 118 aa12.21□□□□□ -0.45
PCDHGA9-202ENST00000616887 FBXL18Q96ME1 805 aa12.21□□□□□ -0.45
PCDHGA9-202ENST00000616887 DHX33Q9H6R0 707 aaKnown RBP12.21□□□□□ -0.45
PCDHGA9-202ENST00000616887 HOMER3Q9NSC5 361 aa12.21□□□□□ -0.45
PCDHGA9-202ENST00000616887 C15orf41Q9Y2V0 281 aa12.21□□□□□ -0.45
PCDHGA9-202ENST00000616887 SPDYE5A6NIY4 337 aa12.21□□□□□ -0.46
PCDHGA9-202ENST00000616887 TTC36A6NLP5 189 aa12.21□□□□□ -0.46
PCDHGA9-202ENST00000616887 SMNDC1O75940 238 aaKnown RBP eCLIP12.21□□□□□ -0.46
PCDHGA9-202ENST00000616887 TOMM70O94826 608 aa12.21□□□□□ -0.46
PCDHGA9-202ENST00000616887 ITGA4P13612 1032 aa12.21□□□□□ -0.46
PCDHGA9-202ENST00000616887 SSTR3P32745 418 aaPredicted RBP12.21□□□□□ -0.46
PCDHGA9-202ENST00000616887 GUCY2FP51841 1108 aa12.21□□□□□ -0.46
PCDHGA9-202ENST00000616887 PRPF4BQ13523 1007 aaKnown RBP12.21□□□□□ -0.46
PCDHGA9-202ENST00000616887 EMC10Q5UCC4 262 aa12.21□□□□□ -0.46
PCDHGA9-202ENST00000616887 DCAF12L1Q5VU92 463 aa12.21□□□□□ -0.46
PCDHGA9-202ENST00000616887 CHADLQ6NUI6 762 aa12.21□□□□□ -0.46
PCDHGA9-202ENST00000616887 AADACL2Q6P093 401 aa12.21□□□□□ -0.46
PCDHGA9-202ENST00000616887 ADAT2Q7Z6V5 191 aaKnown RBP12.21□□□□□ -0.46
PCDHGA9-202ENST00000616887 ERO1BQ86YB8 467 aa12.21□□□□□ -0.46
PCDHGA9-202ENST00000616887 LRRC71Q8N4P6 559 aa12.21□□□□□ -0.46
PCDHGA9-202ENST00000616887 TRAPPC12Q8WVT3 735 aa12.21□□□□□ -0.46
PCDHGA9-202ENST00000616887 TCP11Q8WWU5 503 aa12.21□□□□□ -0.46
PCDHGA9-202ENST00000616887 IFT81Q8WYA0 676 aa12.21□□□□□ -0.46
PCDHGA9-202ENST00000616887 CTNNBL1Q8WYA6 563 aaPredicted RBP12.21□□□□□ -0.46
PCDHGA9-202ENST00000616887 BTBD6Q96KE9 485 aa12.21□□□□□ -0.46
PCDHGA9-202ENST00000616887 MFSD14AQ96MC6 490 aa12.21□□□□□ -0.46
PCDHGA9-202ENST00000616887 PORCNQ9H237 461 aa12.21□□□□□ -0.46
PCDHGA9-202ENST00000616887 ZNF408Q9H9D4 720 aa12.21□□□□□ -0.46
PCDHGA9-202ENST00000616887 TMEM8AQ9HCN3 771 aa12.21□□□□□ -0.46
PCDHGA9-202ENST00000616887 RAB20Q9NX57 234 aa12.21□□□□□ -0.46
PCDHGA9-202ENST00000616887 FBXO40Q9UH90 709 aa12.21□□□□□ -0.46
PCDHGA9-202ENST00000616887 TSKSQ9UJT2 592 aa12.21□□□□□ -0.46
PCDHGA9-202ENST00000616887 NOCTQ9UK39 431 aaKnown RBP12.21□□□□□ -0.46
PCDHGA9-202ENST00000616887 NFU1Q9UMS0 254 aa12.21□□□□□ -0.46
PCDHGA9-202ENST00000616887 A0A0G2JMZ2 1700 aa12.2□□□□□ -0.46
PCDHGA9-202ENST00000616887 MYH9P35579 1960 aaKnown RBP12.2□□□□□ -0.46
PCDHGA9-202ENST00000616887 CXCL11O14625 94 aa12.2□□□□□ -0.46
PCDHGA9-202ENST00000616887 FTLP02792 175 aaPredicted RBP12.2□□□□□ -0.46
PCDHGA9-202ENST00000616887 CLTAP09496 248 aa12.2□□□□□ -0.46
PCDHGA9-202ENST00000616887 ZNF211Q13398 564 aaPredicted RBP12.2□□□□□ -0.46
PCDHGA9-202ENST00000616887 CAPSQ13938 189 aa12.2□□□□□ -0.46
PCDHGA9-202ENST00000616887 C2CD6Q53TS8 623 aa12.2□□□□□ -0.46
PCDHGA9-202ENST00000616887 USP38Q8NB14 1042 aa12.2□□□□□ -0.46
PCDHGA9-202ENST00000616887 SLC7A3Q8WY07 619 aa12.2□□□□□ -0.46
PCDHGA9-202ENST00000616887 RFFLQ8WZ73 363 aa12.2□□□□□ -0.46
PCDHGA9-202ENST00000616887 PDGFCQ9NRA1 345 aa12.2□□□□□ -0.46
PCDHGA9-202ENST00000616887 STXBP5LQ9Y2K9 1186 aa12.2□□□□□ -0.46
PCDHGA9-202ENST00000616887 IGKV6D-21A0A0A0MT36 114 aa12.2□□□□□ -0.46
PCDHGA9-202ENST00000616887 TMEM110-MUSTN1A8MSY1 372 aa12.2□□□□□ -0.46
PCDHGA9-202ENST00000616887 P4HA2O15460 535 aa12.2□□□□□ -0.46
PCDHGA9-202ENST00000616887 HEXIM1O94992 359 aaKnown RBP12.2□□□□□ -0.46
PCDHGA9-202ENST00000616887 TMEM253P0C7T8 217 aa12.2□□□□□ -0.46
PCDHGA9-202ENST00000616887 COPB2P35606 906 aa12.2□□□□□ -0.46
PCDHGA9-202ENST00000616887 MARCKSL1P49006 195 aa12.2□□□□□ -0.46
PCDHGA9-202ENST00000616887 CARSP49589 748 aaKnown RBP12.2□□□□□ -0.46
PCDHGA9-202ENST00000616887 STAT5BP51692 787 aa12.2□□□□□ -0.46
PCDHGA9-202ENST00000616887 ITIH3Q06033 890 aa12.2□□□□□ -0.46
PCDHGA9-202ENST00000616887 BRDTQ58F21 947 aaPredicted RBP12.2□□□□□ -0.46
PCDHGA9-202ENST00000616887 CRELD2Q6UXH1 353 aaPredicted RBP12.2□□□□□ -0.46
PCDHGA9-202ENST00000616887 MAATS1Q7Z4T9 603 aa12.2□□□□□ -0.46
PCDHGA9-202ENST00000616887 SLFN11Q7Z7L1 901 aa12.2□□□□□ -0.46
PCDHGA9-202ENST00000616887 FAM71AQ8IYT1 594 aa12.2□□□□□ -0.46
PCDHGA9-202ENST00000616887 CACNA2D3Q8IZS8 1091 aa12.2□□□□□ -0.46
PCDHGA9-202ENST00000616887 FBXL13Q8NEE6 735 aa12.2□□□□□ -0.46
PCDHGA9-202ENST00000616887 DEPTORQ8TB45 409 aa12.2□□□□□ -0.46
PCDHGA9-202ENST00000616887 PIK3R5Q8WYR1 880 aa12.2□□□□□ -0.46
PCDHGA9-202ENST00000616887 TAF4BQ92750 862 aa12.2□□□□□ -0.46
PCDHGA9-202ENST00000616887 FAM210AQ96ND0 272 aa12.2□□□□□ -0.46
PCDHGA9-202ENST00000616887 ZNF570Q96NI8 536 aa12.2□□□□□ -0.46
PCDHGA9-202ENST00000616887 C17orf75Q9HAS0 396 aa12.2□□□□□ -0.46
PCDHGA9-202ENST00000616887 AGTPBP1Q9UPW5 1226 aa12.2□□□□□ -0.46
PCDHGA9-202ENST00000616887 NOC2LQ9Y3T9 749 aaKnown RBP12.2□□□□□ -0.46
PCDHGA9-202ENST00000616887 NR2E1Q9Y466 385 aa12.2□□□□□ -0.46
PCDHGA9-202ENST00000616887 NCANO14594 1321 aa12.19□□□□□ -0.46
PCDHGA9-202ENST00000616887 MAPK13O15264 365 aa12.19□□□□□ -0.46
PCDHGA9-202ENST00000616887 RAD51CO43502 376 aa12.19□□□□□ -0.46
PCDHGA9-202ENST00000616887 DKC1O60832 514 aaKnown RBP eCLIP12.19□□□□□ -0.46
PCDHGA9-202ENST00000616887 TMOD1P28289 359 aa12.19□□□□□ -0.46
PCDHGA9-202ENST00000616887 FMO1Q01740 532 aa12.19□□□□□ -0.46
PCDHGA9-202ENST00000616887 GUCY2DQ02846 1103 aa12.19□□□□□ -0.46
PCDHGA9-202ENST00000616887 GLE1Q53GS7 698 aaKnown RBP12.19□□□□□ -0.46
PCDHGA9-202ENST00000616887 TDRD10Q5VZ19 366 aaKnown RBP12.19□□□□□ -0.46
PCDHGA9-202ENST00000616887 LLGL2Q6P1M3 1020 aa12.19□□□□□ -0.46
PCDHGA9-202ENST00000616887 PHLDB2Q86SQ0 1253 aa12.19□□□□□ -0.46
PCDHGA9-202ENST00000616887 TMEM130Q8N3G9 435 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms