RNA–Protein interactions for RNA: ENST00000614293.4

ABCA2-223, Transcript of ATP binding cassette subfamily A member 2, human

TSL 5 BASIC

Gene ABCA2, Length 8,146 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA2-223	ENST00000614293	GPR108	Q9NPR9	543 aa		12.8	□□□□□ -0.36
ABCA2-223	ENST00000614293	STOML1	Q9UBI4	398 aa		12.8	□□□□□ -0.36
ABCA2-223	ENST00000614293	P4HA2	O15460	535 aa		12.8	□□□□□ -0.36
ABCA2-223	ENST00000614293	GPC5	P78333	572 aa		12.8	□□□□□ -0.36
ABCA2-223	ENST00000614293	AASDH	Q4L235	1098 aa	Predicted RBP	12.8	□□□□□ -0.36
ABCA2-223	ENST00000614293	TCEAL5	Q5H9L2	206 aa		12.8	□□□□□ -0.36
ABCA2-223	ENST00000614293	RARS2	Q5T160	578 aa	Known RBP	12.8	□□□□□ -0.36
ABCA2-223	ENST00000614293	LRRC8E	Q6NSJ5	796 aa		12.8	□□□□□ -0.36
ABCA2-223	ENST00000614293	TIGD7	Q6NT04	549 aa	Predicted RBP	12.8	□□□□□ -0.36
ABCA2-223	ENST00000614293	FAM117B	Q6P1L5	589 aa		12.8	□□□□□ -0.36
ABCA2-223	ENST00000614293	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	12.8	□□□□□ -0.36
ABCA2-223	ENST00000614293	TSPYL6	Q8N831	410 aa		12.8	□□□□□ -0.36
ABCA2-223	ENST00000614293	FAM213A	Q9BRX8	229 aa		12.8	□□□□□ -0.36
ABCA2-223	ENST00000614293	KLHL3	Q9UH77	587 aa		12.8	□□□□□ -0.36
ABCA2-223	ENST00000614293	UNC13B	O14795	1591 aa		12.8	□□□□□ -0.36
ABCA2-223	ENST00000614293	EVPLL	A8MZ36	301 aa		12.8	□□□□□ -0.36
ABCA2-223	ENST00000614293	CSTF3	Q12996	717 aa	Known RBP	12.8	□□□□□ -0.36
ABCA2-223	ENST00000614293	ARL6IP4	Q66PJ3	421 aa	Known RBP	12.8	□□□□□ -0.36
ABCA2-223	ENST00000614293	EFL1	Q7Z2Z2	1120 aa	Known RBP	12.8	□□□□□ -0.36
ABCA2-223	ENST00000614293	FAM161B	Q96MY7	647 aa		12.8	□□□□□ -0.36
ABCA2-223	ENST00000614293	LSG1	Q9H089	658 aa	Known RBP	12.8	□□□□□ -0.36
ABCA2-223	ENST00000614293	PPARGC1A	Q9UBK2	798 aa	Known RBP	12.8	□□□□□ -0.36
ABCA2-223	ENST00000614293	IL13	P35225	146 aa		12.8	□□□□□ -0.36
ABCA2-223	ENST00000614293	PHKA1	P46020	1223 aa		12.8	□□□□□ -0.36
ABCA2-223	ENST00000614293	BCAR1	P56945	870 aa		12.8	□□□□□ -0.36
ABCA2-223	ENST00000614293	CAMKK2	Q96RR4	588 aa		12.8	□□□□□ -0.36
ABCA2-223	ENST00000614293	CD274	Q9NZQ7	290 aa		12.8	□□□□□ -0.36
ABCA2-223	ENST00000614293	CFAP73	A6NFT4	308 aa		12.79	□□□□□ -0.36
ABCA2-223	ENST00000614293	IL18RAP	O95256	599 aa		12.79	□□□□□ -0.36
ABCA2-223	ENST00000614293	ODC1	P11926	461 aa		12.79	□□□□□ -0.36
ABCA2-223	ENST00000614293	YWHAQ	P27348	245 aa		12.79	□□□□□ -0.36
ABCA2-223	ENST00000614293	ZCCHC8	Q6NZY4	707 aa	Known RBP	12.79	□□□□□ -0.36
ABCA2-223	ENST00000614293	KLHL24	Q6TFL4	600 aa		12.79	□□□□□ -0.36
ABCA2-223	ENST00000614293	PASD1	Q8IV76	773 aa		12.79	□□□□□ -0.36
ABCA2-223	ENST00000614293	SPIRE2	Q8WWL2	714 aa		12.79	□□□□□ -0.36
ABCA2-223	ENST00000614293	TXN	P10599	105 aa	Known RBP	12.79	□□□□□ -0.36
ABCA2-223	ENST00000614293	SLC11A2	P49281	568 aa		12.79	□□□□□ -0.36
ABCA2-223	ENST00000614293	ZNF394	Q53GI3	561 aa		12.79	□□□□□ -0.36
ABCA2-223	ENST00000614293	CAPRIN2	Q6IMN6	1127 aa	Known RBP	12.79	□□□□□ -0.36
ABCA2-223	ENST00000614293	SWSAP1	Q6NVH7	229 aa		12.79	□□□□□ -0.36
ABCA2-223	ENST00000614293	BLOC1S6	Q9UL45	172 aa		12.79	□□□□□ -0.36
ABCA2-223	ENST00000614293	OVOS2	A0A0G2JMS6	1433 aa		12.79	□□□□□ -0.36
ABCA2-223	ENST00000614293	OVOS2	A0A0J9YW53	1432 aa		12.79	□□□□□ -0.36
ABCA2-223	ENST00000614293	OVOS2	Q6IE36	1432 aa		12.79	□□□□□ -0.36
ABCA2-223	ENST00000614293	EFCAB6	Q5THR3	1501 aa		12.79	□□□□□ -0.36
ABCA2-223	ENST00000614293	ZCCHC11	Q5TAX3	1644 aa	Known RBP	12.79	□□□□□ -0.36
ABCA2-223	ENST00000614293	CTIF	O43310	598 aa	Known RBP	12.79	□□□□□ -0.36
ABCA2-223	ENST00000614293	PLCG1	P19174	1290 aa		12.79	□□□□□ -0.36
ABCA2-223	ENST00000614293	PSMC5	P62195	406 aa		12.79	□□□□□ -0.36
ABCA2-223	ENST00000614293	LUZP2	Q86TE4	346 aa		12.79	□□□□□ -0.36
ABCA2-223	ENST00000614293	PRRG3	Q9BZD7	231 aa		12.79	□□□□□ -0.36
ABCA2-223	ENST00000614293	MAP2	P11137	1827 aa	Known RBP	12.79	□□□□□ -0.36
ABCA2-223	ENST00000614293	PEX1	O43933	1283 aa		12.79	□□□□□ -0.36
ABCA2-223	ENST00000614293	SLC16A1	P53985	500 aa		12.79	□□□□□ -0.36
ABCA2-223	ENST00000614293	DGKH	Q86XP1	1220 aa		12.79	□□□□□ -0.36
ABCA2-223	ENST00000614293	SHCBP1	Q8NEM2	672 aa		12.79	□□□□□ -0.36
ABCA2-223	ENST00000614293	APPL1	Q9UKG1	709 aa		12.79	□□□□□ -0.36
ABCA2-223	ENST00000614293	NDUFS2	O75306	463 aa		12.79	□□□□□ -0.36
ABCA2-223	ENST00000614293	PSMC3	P17980	439 aa		12.79	□□□□□ -0.36
ABCA2-223	ENST00000614293	OSBPL9	Q96SU4	736 aa		12.79	□□□□□ -0.36
ABCA2-223	ENST00000614293	EPN3	Q9H201	632 aa		12.79	□□□□□ -0.36
ABCA2-223	ENST00000614293	SMYD3	Q9H7B4	428 aa		12.79	□□□□□ -0.36
ABCA2-223	ENST00000614293	GABBR1	Q9UBS5	961 aa		12.79	□□□□□ -0.36
ABCA2-223	ENST00000614293	MSRA	Q9UJ68	235 aa		12.79	□□□□□ -0.36
ABCA2-223	ENST00000614293	CDC23	Q9UJX2	597 aa		12.79	□□□□□ -0.36
ABCA2-223	ENST00000614293	PCDHB9	Q9Y5E1	797 aa		12.79	□□□□□ -0.36
ABCA2-223	ENST00000614293	HNRNPC	P07910	306 aa	Known RBP eCLIP	12.79	□□□□□ -0.36
ABCA2-223	ENST00000614293	RBP5	P82980	135 aa		12.79	□□□□□ -0.36
ABCA2-223	ENST00000614293	E2F4	Q16254	413 aa		12.79	□□□□□ -0.36
ABCA2-223	ENST00000614293	PALLD	Q8WX93	1383 aa		12.78	□□□□□ -0.36
ABCA2-223	ENST00000614293	BTBD18	B2RXH4	712 aa		12.78	□□□□□ -0.36
ABCA2-223	ENST00000614293	FOXP2	O15409	715 aa		12.78	□□□□□ -0.36
ABCA2-223	ENST00000614293	GGPS1	O95749	300 aa		12.78	□□□□□ -0.36
ABCA2-223	ENST00000614293	FNTA	P49354	379 aa		12.78	□□□□□ -0.36
ABCA2-223	ENST00000614293	PADI6	Q6TGC4	694 aa		12.78	□□□□□ -0.36
ABCA2-223	ENST00000614293	RNASE11	Q8TAA1	199 aa	Known RBP	12.78	□□□□□ -0.36
ABCA2-223	ENST00000614293	ITSN1	Q15811	1721 aa		12.78	□□□□□ -0.36
ABCA2-223	ENST00000614293	ARHGAP31	Q2M1Z3	1444 aa		12.78	□□□□□ -0.36
ABCA2-223	ENST00000614293	SUPT20HL2	P0C7V6	817 aa		12.78	□□□□□ -0.36
ABCA2-223	ENST00000614293	VCAM1	P19320	739 aa		12.78	□□□□□ -0.36
ABCA2-223	ENST00000614293	VAMP7	P51809	220 aa		12.78	□□□□□ -0.36
ABCA2-223	ENST00000614293	NFIA	Q12857	509 aa		12.78	□□□□□ -0.36
ABCA2-223	ENST00000614293	PEX6	Q13608	980 aa		12.78	□□□□□ -0.36
ABCA2-223	ENST00000614293	ANO5	Q75V66	913 aa		12.78	□□□□□ -0.36
ABCA2-223	ENST00000614293	G2E3	Q7L622	706 aa		12.78	□□□□□ -0.36
ABCA2-223	ENST00000614293	HERC6	Q8IVU3	1022 aa		12.78	□□□□□ -0.36
ABCA2-223	ENST00000614293	MRPS31	Q92665	395 aa	Known RBP	12.78	□□□□□ -0.36
ABCA2-223	ENST00000614293	CNOT8	Q9UFF9	292 aa	Known RBP	12.78	□□□□□ -0.36
ABCA2-223	ENST00000614293	PLA2G4C	Q9UP65	541 aa		12.78	□□□□□ -0.36
ABCA2-223	ENST00000614293	KIAA1210	Q9ULL0	1709 aa		12.78	□□□□□ -0.36
ABCA2-223	ENST00000614293	MTA1	Q13330	715 aa		12.78	□□□□□ -0.36
ABCA2-223	ENST00000614293	TRIP13	Q15645	432 aa	Predicted RBP	12.78	□□□□□ -0.36
ABCA2-223	ENST00000614293	WDR41	Q9HAD4	459 aa		12.78	□□□□□ -0.36
ABCA2-223	ENST00000614293	ABCA8	O94911	1581 aa		12.78	□□□□□ -0.36
ABCA2-223	ENST00000614293	SLC25A27	O95847	323 aa		12.78	□□□□□ -0.36
ABCA2-223	ENST00000614293	UROD	P06132	367 aa		12.78	□□□□□ -0.36
ABCA2-223	ENST00000614293	ENO2	P09104	434 aa	Predicted RBP	12.78	□□□□□ -0.36
ABCA2-223	ENST00000614293	FAR2	Q96K12	515 aa		12.78	□□□□□ -0.36
ABCA2-223	ENST00000614293	PHACTR1	Q9C0D0	580 aa		12.78	□□□□□ -0.36
ABCA2-223	ENST00000614293	KDM6A	O15550	1401 aa	Predicted RBP	12.78	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms